CK937493
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODE_MOUSE (Extracellular superoxide dismutase [Cu-Zn] OS=Mus musculus GN=Sod3 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.910e-16 Identity = 51/141 (36.17%), Postives = 69/141 (48.94%), Query Frame = 2 Query: 152 VKGTVSFAQEGDGPT-----TVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIG 559 + G V F Q G G ++ G + HVH GD + GC STGPH+NP H D + T + L+GP++I+GR+VVVHA DDLGKGG++ S GNAG R+AC ++G Sbjct: 92 ITGLVLFRQLGPGSRLEAYFSLEGFPAEQNASNRAIHVHEFGDLSQGCDSTGPHYNPMEVPHPQHPGDFGNFVVRNGQLWRHRVGLTAS-------LAGPHAILGRSVVVHAGEDDLGKGGNQASLQNGNAGRRLACCVVG 225
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODCP_POPTM (Superoxide dismutase [Cu-Zn], chloroplastic OS=Populus tremuloides GN=SODCP PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.582e-13 Identity = 33/43 (76.74%), Postives = 39/43 (90.70%), Query Frame = 2 Query: 434 PNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 PNS++GRA+VVH DDLGKGGHELS STGNAGGR+ACG++GL Sbjct: 156 PNSVVGRALVVHELQDDLGKGGHELSLSTGNAGGRLACGVVGL 198
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODC_DEIRA (Superoxide dismutase [Cu-Zn] OS=Deinococcus radiodurans GN=sodC PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.185e-12 Identity = 48/153 (31.37%), Postives = 69/153 (45.10%), Query Frame = 2 Query: 131 VLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNG---------CMSTGPHFNP-AGKEHGAPE--DDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGI 553 +L T V GT +F+ G T VS +SGLK GPHG H+H + G + G HF+P A H P +D H N++ ++GP ++GR++V+HAD DD + GN+GGR CG+ Sbjct: 32 LLDQTGKVTGTATFSPSPIG-TRVSIEVSGLKAGPHGLHIHENPNCNPGPDAQGQTIPFGAAGGHFDPGASHNHDGPHARNDQGHGGDLPMITVGEDGKGRLNFDTNRLKMTGPTGVLGRSIVIHADADDY------QTNPAGNSGGRERCGV 177 The following BLAST results are available for this feature:
BLAST of CK937493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 143
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937493 ID=CK937493; Name=CK937493; organism=Citrus sinensis; type=EST; length=737bpback to top |