CK937493
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODCP_PETHY (Superoxide dismutase [Cu-Zn], chloroplastic OS=Petunia hybrida GN=SODCP PE=2 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 6.949e-51 Identity = 95/148 (64.19%), Postives = 110/148 (74.32%), Query Frame = 2 Query: 119 KAVAVLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 KAVAVL GT V+G V+ Q+ DGPTTV ++GL PG HGFH+H GDTTNGCMSTGPHFNP G HGAP D+ RHA A T+VDNQIPLSGPNS++GRA+VVH DDLGKGGHELS +TGNAGGR+ACG++GL Sbjct: 69 KAVAVLKGTSNVEGVVTLTQDDDGPTTVKVRITGLAPGLHGFHLHEFGDTTNGCMSTGPHFNPNGLTHGAPGDEVRHAGDLGNIEANASGVAEATLVDNQIPLSGPNSVVGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 216
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODCP_PEA (Superoxide dismutase [Cu-Zn], chloroplastic OS=Pisum sativum GN=SODCP PE=2 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.003e-49 Identity = 92/148 (62.16%), Postives = 111/148 (75.00%), Query Frame = 2 Query: 119 KAVAVLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 KAV+VL GT V+G V+ Q+ +GPTTV+ ++GL PG HGFH+H GDTTNGC+STGPHFNP HGAPED+ RHA A T+VDNQIPL+GPNS++GRA+VVH DDLGKGGHELS STGNAGGR+ACG++GL Sbjct: 52 KAVSVLKGTSAVEGVVTLTQDDEGPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGPHFNPNKLTHGAPEDEIRHAGDLGNIVANAEGVAEATIVDNQIPLTGPNSVVGRALVVHELQDDLGKGGHELSLSTGNAGGRLACGVVGL 199
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODCP_ORYSJ (Superoxide dismutase [Cu-Zn], chloroplastic OS=Oryza sativa subsp. japonica GN=SODCP PE=1 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.920e-49 Identity = 93/148 (62.84%), Postives = 108/148 (72.97%), Query Frame = 2 Query: 119 KAVAVLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 KAVAVL GT V+G V+ Q+ GPTTV+ ++GL PG HGFH+H GDTTNGC+STGPHFNP HGAPED+ RHA A T+VD QIPLSGPNS++GRA VVH DDLGKGGHELS STGNAGGR+ACG++GL Sbjct: 61 KAVAVLKGTSQVEGVVTLTQDDQGPTTVNVRVTGLTPGLHGFHLHEFGDTTNGCISTGPHFNPNNLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDKQIPLSGPNSVVGRAFVVHELEDDLGKGGHELSLSTGNAGGRLACGVVGL 208
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODCP_MEDSA (Superoxide dismutase [Cu-Zn], chloroplastic OS=Medicago sativa GN=SODCP PE=2 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 3.813e-49 Identity = 93/148 (62.84%), Postives = 109/148 (73.65%), Query Frame = 2 Query: 119 KAVAVLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 KAVAVL G V+G V+ QE + PTTV+ ++GL PG HGFH+H GDTTNGC+STGPHFNP HGAPED+ RHA A T+VDNQIPL+GPNS+IGRA+VVH DDLGKGGHELS STGNAGGR+ACG++GL Sbjct: 52 KAVAVLKGNSTVEGVVTLTQENESPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGPHFNPNQLTHGAPEDEIRHAGDLGNIIADANGVAEATIVDNQIPLTGPNSVIGRALVVHELEDDLGKGGHELSLSTGNAGGRLACGVVGL 199
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODC2_MESCR (Superoxide dismutase [Cu-Zn] 2 OS=Mesembryanthemum crystallinum GN=SODCC.2 PE=2 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 3.813e-49 Identity = 94/151 (62.25%), Postives = 109/151 (72.19%), Query Frame = 2 Query: 113 MVKAVAVLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGLQ 565 ++KAVAV+ G VKG++ F Q+ G T V G ++GL PG HGFH+HALGDTTNGC STGPHFNP K+HGAP D RHA A +V D QIPLSG +SI+GRAVVVHAD DDLG+ GHELSK+TGNAG RV CGIIGLQ Sbjct: 3 VIKAVAVINGNNNVKGSLQFIQDSTGVTHVKGRITGLTPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPFDTERHAGDLGNVVAGADGVAEVSVRDTQIPLSGQHSILGRAVVVHADQDDLGRTGHELSKTTGNAGARVRCGIIGLQ 153
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODCP_SOLLC (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solanum lycopersicum GN=SODCP.2 PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.472e-48 Identity = 91/148 (61.49%), Postives = 109/148 (73.65%), Query Frame = 2 Query: 119 KAVAVLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 KAVAVL G V+G V+ +Q+ DGPTTV+ ++GL PG HGFH+H GDTTNGCMSTG HFNP HGAP D+ RHA A T+VDNQIPL+GPNS++GRA+VVH DDLGKGGHELS +TGNAGGR+ACG++GL Sbjct: 67 KAVAVLKGNSNVEGVVTLSQDDDGPTTVNVRITGLAPGLHGFHLHEYGDTTNGCMSTGAHFNPNKLTHGAPGDEIRHAGDLGNIVANADGVAEVTLVDNQIPLTGPNSVVGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 214
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODCP_PINSY (Superoxide dismutase [Cu-Zn], chloroplastic (Fragment) OS=Pinus sylvestris GN=SODCP PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.356e-46 Identity = 88/137 (64.23%), Postives = 102/137 (74.45%), Query Frame = 2 Query: 152 VKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 V+G V+ +QE +GPTTV L+GL PG HGFH+H GDTTNGCMSTG HFNP HGAPEDD RHA A T+VDNQIPLSGP+S+IGRA+VVH DDLGKGGHELS +TGNAGGR+ACG++GL Sbjct: 2 VEGVVTLSQEDNGPTTVKVRLTGLTPGKHGFHLHEFGDTTNGCMSTGSHFNPKKLTHGAPEDDVRHAGDLGNIVAGSDGVAEATIVDNQIPLSGPDSVIGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 138
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODCP_ZANAE (Superoxide dismutase [Cu-Zn], chloroplastic OS=Zantedeschia aethiopica GN=SODCP PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 3.021e-46 Identity = 91/148 (61.49%), Postives = 105/148 (70.95%), Query Frame = 2 Query: 119 KAVAVLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 KAVAVL GT V G V+ QE DGPTTV+ ++GL PG HGFH+H GDTTNGC+STG HFNP HGAP D RHA A T+VD+QIPLSG NS++GRA VVH DDLGKGGHELS +TGNAGGR+ACG++GL Sbjct: 66 KAVAVLKGTSQVDGVVTLVQEDDGPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGSHFNPNKLTHGAPMDVVRHAGDLGNIVANVDGLAEATIVDDQIPLSGSNSVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 213
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODC_DROVI (Superoxide dismutase [Cu-Zn] OS=Drosophila virilis GN=Sod PE=3 SV=2) HSP 1 Score: 183.341 bits (464), Expect = 1.148e-45 Identity = 90/151 (59.60%), Postives = 104/151 (68.87%), Query Frame = 2 Query: 113 MVKAVAVLGGTEGVKGTVSFAQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 +VKAV V+ G KGTV F QEG+G P V+G ++GL G HGFHVH GD TNGCMS+GPHFNP KEHGAP D+NRH + D +I L G NSIIGR VVVHADPDDLGKGGHELSK+TGNAG R+ CG+IG+ Sbjct: 2 VVKAVCVINGD--AKGTVFFEQEGEGCPVKVTGEVTGLAKGQHGFHVHEFGDNTNGCMSSGPHFNPYQKEHGAPTDENRHLGDLGNIIANGDGPTPVNICDCKITLLGANSIIGRTVVVHADPDDLGKGGHELSKTTGNAGARIGCGVIGI 150
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODC_DROWI (Superoxide dismutase [Cu-Zn] OS=Drosophila willistoni GN=Sod PE=3 SV=2) HSP 1 Score: 181.8 bits (460), Expect = 3.341e-45 Identity = 89/151 (58.94%), Postives = 104/151 (68.87%), Query Frame = 2 Query: 113 MVKAVAVLGGTEGVKGTVSFAQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 +VKAV V+ G KGTV F QE +G P V+G ++GL G HGFHVH GD TNGCMS+GPHFNP KEHGAP D+NRH + D++I L G NSIIGR VVVHADPDDLGKGGHELSK+TGNAG R+ CG+IG+ Sbjct: 2 VVKAVCVINGD--AKGTVFFEQEDNGAPVKVTGEVTGLGKGLHGFHVHEFGDNTNGCMSSGPHFNPHSKEHGAPGDENRHLGDLGNIEASGSGPTAVNITDSKITLVGANSIIGRTVVVHADPDDLGKGGHELSKTTGNAGARIGCGVIGI 150 The following BLAST results are available for this feature:
BLAST of CK937493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 143
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK937493 ID=CK937493; Name=CK937493; organism=Citrus sinensis; type=EST; length=737bpback to top |