CK937493
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODC_ASPJA (Superoxide dismutase [Cu-Zn] (Fragment) OS=Aspergillus japonicus GN=sodC PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.359e-38 Identity = 75/111 (67.57%), Postives = 84/111 (75.68%), Query Frame = 2 Query: 236 HGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGLQG 568 HGFHVHALGDTTNGCMSTGPHFNP GKEHGAP+D+NRHA A V D+QIPL+G +SIIGRAVVVHADPDDLGKGGHELSK+TGN+ + G+QG Sbjct: 8 HGFHVHALGDTTNGCMSTGPHFNPTGKEHGAPQDENRHAGDLGNITAGADGVANVNVSDSQIPLTGAHSIIGRAVVVHADPDDLGKGGHELSKTTGNSNSSMDSCAHGIQG 118
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODC_CHICK (Superoxide dismutase [Cu-Zn] OS=Gallus gallus GN=SOD1 PE=1 SV=3) HSP 1 Score: 159.458 bits (402), Expect = 1.775e-38 Identity = 76/149 (51.01%), Postives = 96/149 (64.43%), Query Frame = 2 Query: 116 VKAVAVLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 +KAV V+ G V+G + F Q+G GP V+G ++GL G HGFHVH GD TNGC S G HFNP GK+HG P+D +RH A + D+ I L+GP+ IIGR +VVHA DDLG+GG SK TGNAG R+ACG+IG+ Sbjct: 4 LKAVCVMKGDAPVEGVIHFQQQGSGPVKVTGKITGLSDGDHGFHVHEFGDNTNGCTSAGAHFNPEGKQHGGPKDADRHV-GDLGNVTAKGGVAEVEIEDSVISLTGPHCIIGRTMVVHAKSDDLGRGGDNESKLTGNAGPRLACGVIGI 151
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODC_CANAL (Superoxide dismutase [Cu-Zn] OS=Candida albicans GN=SOD1 PE=3 SV=3) HSP 1 Score: 159.073 bits (401), Expect = 2.319e-38 Identity = 83/152 (54.61%), Postives = 96/152 (63.16%), Query Frame = 2 Query: 113 MVKAVAVLGGTEGVKGTVSFAQEGDG-PTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 MVKAVAV+ G V+GTV F QE + PTT+S + G P GFH+H GD TNGC S GPHFNP GK+HGAPEDD RH A T D I L G +SI+GR +VVHA DD GKGG E SK+TG+AG R ACG+IGL Sbjct: 1 MVKAVAVVRGDSKVQGTVHFEQESESAPTTISWEIEGNDPNALRGFHIHQFGDNTNGCTSAGPHFNPFGKQHGAPEDDERHVGDLGNISTDGNGVAKGTKQDLLIKLIGKDSILGRTIVVHAGTDDYGKGGFEDSKTTGHAGARPACGVIGL 152
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODC_BRUPA (Superoxide dismutase [Cu-Zn] OS=Brugia pahangi GN=SODC PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.319e-38 Identity = 81/150 (54.00%), Postives = 96/150 (64.00%), Query Frame = 2 Query: 125 VAVLGGTEGVKGTVSFAQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKG---GHELSKSTGNAGGRVACGIIGL 562 +AVL G + V G + F QE +G PTT+SG + GL PG HGFHVH GDTTNGC+S GPHFNP K HG P D+ RH TA + D + L GPNSIIGR++VVHAD DDLGKG + S TGNAG RVACGI+ + Sbjct: 6 IAVLRG-DNVSGIIRFKQEKEGSPTTISGEIKGLTPGLHGFHVHQYGDTTNGCISAGPHFNPYNKTHGGPTDEMRHVGDLGNIVAGADGTAHIDISDKHVQLLGPNSIIGRSLVVHADQDDLGKGVGDKKDESLKTGNAGARVACGIVAV 154
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODC_BOVIN (Superoxide dismutase [Cu-Zn] OS=Bos taurus GN=SOD1 PE=1 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 2.319e-38 Identity = 78/148 (52.70%), Postives = 94/148 (63.51%), Query Frame = 2 Query: 119 KAVAVLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 KAV VL G V+GT+ F +GD V+GS++GL G HGFHVH GD T GC S GPHFNP K+HG P+D+ RH A +VD I LSG SIIGR +VVH PDDLG+GG+E S TGNAG R+ACG+IG+ Sbjct: 4 KAVCVLKGDGPVQGTIHFEAKGD-TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGSRLACGVIGI 150
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODC_ASHGO (Superoxide dismutase [Cu-Zn] OS=Ashbya gossypii GN=SOD1 PE=3 SV=3) HSP 1 Score: 159.073 bits (401), Expect = 2.319e-38 Identity = 81/152 (53.29%), Postives = 97/152 (63.82%), Query Frame = 2 Query: 113 MVKAVAVLGGTEGVKGTVSFAQEGDGP-TTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 MVKAVAVL G GV G V F QE D TT+S +++G +P HGFH+H GD TNGC S+G HFNP K HG+PED+NRH A + D I + GP SI+GR VVVHA DDLG+GG+E S TGNAG R ACG+IG+ Sbjct: 1 MVKAVAVLKGDAGVSGVVHFEQEADAAVTTISWNITGFEPNTEHGFHIHEFGDVTNGCTSSGSHFNPFKKTHGSPEDENRHVGDMGNVLADANGVAVGSAKDPLIKIFGPTSILGRTVVVHAGKDDLGRGGNEESLKTGNAGPRPACGVIGI 152
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODC_PAETN (Superoxide dismutase [Cu-Zn] OS=Paecilomyces tenuipes GN=SOD1 PE=3 SV=3) HSP 1 Score: 158.688 bits (400), Expect = 3.028e-38 Identity = 82/152 (53.95%), Postives = 97/152 (63.82%), Query Frame = 2 Query: 113 MVKAVAVLGGTEGVKGTVSFAQEGDG-PTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 MVKAV VL G V GTV+F QE + PTT++ L+G P GFH+H GD TNGC S GPHFNP GK HGAP D RH A ++ D+Q+ L GP+S+IGR VVVHA DDLGKGG+E S TGNAG R ACG+IG+ Sbjct: 1 MVKAVCVLRGDAKVGGTVTFEQESESAPTTITYDLTGNDPNAERGFHIHTFGDNTNGCTSAGPHFNPHGKTHGAPTDAARHVGDLGNVKTDAQGNAKGSIQDSQVKLIGPHSVIGRTVVVHAGTDDLGKGGNEESLKTGNAGPRPACGVIGV 152
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODC_CANGA (Superoxide dismutase [Cu-Zn] OS=Candida glabrata GN=SOD1 PE=3 SV=3) HSP 1 Score: 158.688 bits (400), Expect = 3.028e-38 Identity = 79/152 (51.97%), Postives = 98/152 (64.47%), Query Frame = 2 Query: 113 MVKAVAVLGGTEGVKGTVSFAQEGD-GPTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 MVKAVAVL G+ GV G V+ Q + PTT++ ++G P GFH+H GD TNGC+S GPHFNP K HGAP+D+NRH A + D+ + L GP S++GR+VVVHA DDLGKGG+E S TGNAG R ACG+IGL Sbjct: 1 MVKAVAVLRGSAGVSGVVTLEQASEQDPTTITYEIAGNDPNAERGFHIHEFGDVTNGCVSAGPHFNPFKKTHGAPQDENRHVGDLGNIKTDAQGVAKGVITDSLVKLIGPTSVVGRSVVVHAGTDDLGKGGNEESLKTGNAGPRPACGVIGL 152
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODC_MOUSE (Superoxide dismutase [Cu-Zn] OS=Mus musculus GN=Sod1 PE=1 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 3.955e-38 Identity = 77/150 (51.33%), Postives = 94/150 (62.67%), Query Frame = 2 Query: 116 VKAVAVLGGTEGVKGTVSFAQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 +KAV VL G V+GT+ F Q+ G P +SG ++GL G HGFHVH GD T GC S GPHFNP K+HG P D+ RH A ++ D I LSG +SIIGR +VVH DDLGKGG+E S TGNAG R+ACG+IG+ Sbjct: 3 MKAVCVLKGDGPVQGTIHFEQKASGEPVVLSGQITGLTEGQHGFHVHQYGDNTQGCTSAGPHFNPHSKKHGGPADEERHVGDLGNVTAGKDGVANVSIEDRVISLSGEHSIIGRTMVVHEKQDDLGKGGNEESTKTGNAGSRLACGVIGI 152
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODE_BRUPA (Extracellular superoxide dismutase [Cu-Zn] OS=Brugia pahangi PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.747e-38 Identity = 81/161 (50.31%), Postives = 100/161 (62.11%), Query Frame = 2 Query: 92 VLRSHSTMVKAVAVLGGTEG-VKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKG---GHELSKSTGNAGGRVACGIIGL 562 + R+ + A+AVL G + GT+ F Q+ + TT+SG + GL PG HGFHVH GDTTNGC+S GPHFNP K HG P D+ RH TA + D + L GPNSIIGR++VVHAD DDLGKG + S TGNAGGRVACGI+ + Sbjct: 38 IRRTITKTATAIAVLHSDNGNINGTIHFQQDKNS-TTISGEIKGLTPGLHGFHVHQYGDTTNGCISAGPHFNPYNKTHGDPTDEMRHVGDLGNIVAGADGTAHIDISDKHVQLLGPNSIIGRSLVVHADQDDLGKGVGDKKDESLKTGNAGGRVACGIVAI 197 The following BLAST results are available for this feature:
BLAST of CK937493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 143
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937493 ID=CK937493; Name=CK937493; organism=Citrus sinensis; type=EST; length=737bpback to top |