CK937493
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODC_ONCVO (Superoxide dismutase [Cu-Zn] OS=Onchocerca volvulus GN=sod-1 PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.373e-37 Identity = 80/151 (52.98%), Postives = 97/151 (64.24%), Query Frame = 2 Query: 122 AVAVLGGTEGVKGTVSFAQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKG---GHELSKSTGNAGGRVACGIIGL 562 A+AVL G + V G + F Q+ +G PTTV+G + GL PG HGFH+H GDTTNGC+S GPHFNP K HG D+ RH TA ++ D I L GPNSIIGR++VVHAD DDLGKG + S TGNAG RVACGI+ + Sbjct: 5 AIAVLRG-DTVSGIIRFKQDKEGLPTTVTGEVKGLTPGLHGFHIHQYGDTTNGCISAGPHFNPYNKTHGDRTDEIRHVGDLGNIEAGADGTAHISISDQHIQLLGPNSIIGRSIVVHADQDDLGKGVGAKKDESLKTGNAGARVACGIVAI 154
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODC5_DICDI (Superoxide dismutase [Cu-Zn] 5 OS=Dictyostelium discoideum GN=sodE PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.373e-37 Identity = 76/150 (50.67%), Postives = 95/150 (63.33%), Query Frame = 2 Query: 116 VKAVAVLGGTEGVKGTVSFAQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 + A+ V+ G +GV G ++F Q + P +SG +SGLK G HGFHVH GDTTNGC+S G HFNP KEHG+P D+NRH + + DN I L G NSIIGR++VVH DDLG+G + SK TGNAG R+ CGII L Sbjct: 1 MSAICVIKG-DGVDGIINFKQNDNKSPVIISGVISGLKEGKHGFHVHEFGDTTNGCLSAGAHFNPFKKEHGSPNDENRHVGDLGNIESNKDKKSIINITDNIITLFGQNSIIGRSIVVHDKEDDLGRGNSQDSKITGNAGSRLGCGIIAL 149
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODC_PANTR (Superoxide dismutase [Cu-Zn] OS=Pan troglodytes GN=SOD1 PE=2 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 5.711e-37 Identity = 76/149 (51.01%), Postives = 94/149 (63.09%), Query Frame = 2 Query: 119 KAVAVLGGTEGVKGTVSFAQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 KAV VL G V+G ++F Q E +GP V GS+ GL G HGFHVH GD T GC S GPHFNP ++HG P+D+ RH A ++ D+ I LSG + IIGR +VVH DDLGKGG+E S TGNAG R+ACG+IG+ Sbjct: 4 KAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODC_HUMAN (Superoxide dismutase [Cu-Zn] OS=Homo sapiens GN=SOD1 PE=1 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 5.711e-37 Identity = 76/149 (51.01%), Postives = 94/149 (63.09%), Query Frame = 2 Query: 119 KAVAVLGGTEGVKGTVSFAQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 KAV VL G V+G ++F Q E +GP V GS+ GL G HGFHVH GD T GC S GPHFNP ++HG P+D+ RH A ++ D+ I LSG + IIGR +VVH DDLGKGG+E S TGNAG R+ACG+IG+ Sbjct: 4 KAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODC_ASPNG (Superoxide dismutase [Cu-Zn] OS=Aspergillus niger GN=sodC PE=1 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 5.711e-37 Identity = 79/152 (51.97%), Postives = 95/152 (62.50%), Query Frame = 2 Query: 113 MVKAVAVLGGTEGVKGTVSFAQEGDG-PTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 MVKAVAV+ G V GTV+F Q + PTT+S +++G GFHVH GD TNGC S GPHFNP GK HGAPEDD RH A + D + L G S++GR +VVHA DDLG+GG+E SK TGNAG R ACG+IG+ Sbjct: 1 MVKAVAVIRGDSKVSGTVTFEQANENTPTTISWNITGHDANAERGFHVHQFGDNTNGCTSAGPHFNPYGKTHGAPEDDERHVGDLGNFKTDAEGNAVGSKQDKLVKLIGAESVLGRTLVVHAGTDDLGRGGNEESKKTGNAGPRPACGVIGI 152
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODC_ASPNC (Superoxide dismutase [Cu-Zn] OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sodC PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.711e-37 Identity = 79/152 (51.97%), Postives = 95/152 (62.50%), Query Frame = 2 Query: 113 MVKAVAVLGGTEGVKGTVSFAQEGDG-PTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 MVKAVAV+ G V GTV+F Q + PTT+S +++G GFHVH GD TNGC S GPHFNP GK HGAPEDD RH A + D + L G S++GR +VVHA DDLG+GG+E SK TGNAG R ACG+IG+ Sbjct: 1 MVKAVAVIRGDSKVSGTVTFEQANENTPTTISWNITGHDANAERGFHVHQFGDNTNGCTSAGPHFNPFGKTHGAPEDDERHVGDLGNFKTDAEGNAVGSKQDKLVKLIGAESVLGRTLVVHAGTDDLGRGGNEESKKTGNAGPRPACGVIGI 152
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODC_NEUCR (Superoxide dismutase [Cu-Zn] OS=Neurospora crassa GN=sod-1 PE=1 SV=3) HSP 1 Score: 154.066 bits (388), Expect = 7.459e-37 Identity = 81/152 (53.29%), Postives = 93/152 (61.18%), Query Frame = 2 Query: 113 MVKAVAVLGGTEGVKGTVSFAQEGDG-PTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 MVKAVAV+ G VKGTV F QE + PTT++ +SG P GFH+H GD TNGC S GPHFNP G HG + RH A TV DN + L GP S+IGR VVVHA DDLGKGG+E S TGNAG R ACG+IG+ Sbjct: 1 MVKAVAVVRGDSNVKGTVIFEQESESAPTTITYDISGNDPNAKRGFHIHTFGDNTNGCTSAGPHFNPHGTTHGDRTAEVRHVGDLGNIETDAQGNAKGTVTDNLVKLIGPESVIGRTVVVHAGTDDLGKGGNEESLKTGNAGPRPACGVIGI 152
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODC_RABIT (Superoxide dismutase [Cu-Zn] OS=Oryctolagus cuniculus GN=SOD1 PE=1 SV=3) HSP 1 Score: 153.295 bits (386), Expect = 1.272e-36 Identity = 73/148 (49.32%), Postives = 90/148 (60.81%), Query Frame = 2 Query: 119 KAVAVLGGTEGVKGTVSFAQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 KAV VL G V+ T+ F Q+G GP V G ++GL G H FHVH GD GC S GPHFNP K+HG P+D+ RH A + D+ I LSG S+IGR +VVH DDLGKGG++ S TGNAG R+ACG+IG+ Sbjct: 4 KAVCVLKGDGPVEATIHFEQKGTGPVVVKGRITGLTEGLHEFHVHQFGDNRQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTAGSNGVADVLIEDSVISLSGDMSVIGRTLVVHEKEDDLGKGGNDESTKTGNAGSRLACGVIGI 151
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODC_PONPY (Superoxide dismutase [Cu-Zn] OS=Pongo pygmaeus GN=SOD1 PE=2 SV=3) HSP 1 Score: 152.525 bits (384), Expect = 2.170e-36 Identity = 77/150 (51.33%), Postives = 95/150 (63.33%), Query Frame = 2 Query: 119 KAVAVLGGTEG-VKGTVSFAQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 KAV VL G VKG ++F Q E +GP V GS+ GL G HGFHVH GD T GC S GPHFNP ++HG P+D+ RH A+ ++ D+ I LSG + IIGR +VVH DDLGKGG+E S TGNAG R+ACG+IG+ Sbjct: 4 KAVCVLKGDNSPVKGIINFEQKERNGPVKVWGSIEGLTEGLHGFHVHEFGDNTVGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVASVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 153
BLAST of CK937493 vs. ExPASy Swiss-Prot
Match: SODC_CLAPU (Superoxide dismutase [Cu-Zn] OS=Claviceps purpurea GN=SOD1 PE=3 SV=3) HSP 1 Score: 152.525 bits (384), Expect = 2.170e-36 Identity = 79/152 (51.97%), Postives = 94/152 (61.84%), Query Frame = 2 Query: 113 MVKAVAVLGGTEGVKGTVSFAQEGDG-PTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 562 MVKAVAVL G V GTV F QE + PTT++ ++G GFH+H GD TNGC S GPHFNP GK HGAP D+ RH A +V D + L GP+S+IGR VV+HA DDLGKG +E S TGNAG R ACG+IG+ Sbjct: 1 MVKAVAVLRGDAKVGGTVVFEQESESAPTTITWDITGNDANAKRGFHIHTFGDNTNGCTSAGPHFNPHGKTHGAPTDEARHVGDLGNLETDGQGNAKGSVKDEHVKLIGPHSVIGRTVVIHAGTDDLGKGDNEESLKTGNAGPRPACGVIGI 152 The following BLAST results are available for this feature:
BLAST of CK937493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 143
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937493 ID=CK937493; Name=CK937493; organism=Citrus sinensis; type=EST; length=737bpback to top |