EY665879
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY665879 vs. ExPASy Swiss-Prot
Match: RS4_METST (30S ribosomal protein S4P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps4p PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.844e-16 Identity = 48/135 (35.56%), Postives = 77/135 (57.04%), Query Frame = 2 Query: 98 KTFKKPRRPYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIP 502 K + P P+ +R+ E RL +YGL+ K+E+W+ + + R R AR +L +D R + + LL + R GF+ + KL+ VL L VE+ L RRLQ+LVFK G++ + AR+ + HI + + +N P Sbjct: 9 KQYDTPSHPWNADRIKEENRLANKYGLKNKKEIWKAESRVKRYRRDARIILGMDIDE--RADKEKELLDHLVRAGFISPNA-KLEEVLDLNVEDILRRRLQSLVFKRGLSHTAKEARLFVVHGHITLNGKKINAP 140
BLAST of EY665879 vs. ExPASy Swiss-Prot
Match: RS4_METS3 (30S ribosomal protein S4P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rps4p PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.883e-15 Identity = 50/139 (35.97%), Postives = 75/139 (53.96%), Query Frame = 2 Query: 86 RNYGKTFKKPRRPYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIP 502 R K + P P+ ER+ E +L+ +YGL+ K+E+W+ + R AR LL D + E LL + R G L E L+ VL LTVE+ L RRLQT+V+K G+A++ AR+ + HI + + +N P Sbjct: 5 RKSRKKYNTPPHPWNAERIKNENKLMTKYGLKNKKEIWKADTLVRRYSREARYLLGFDMDQMQD--EKLELLGHLARTGVLPEGA-ALEEVLNLTVEDILRRRLQTIVYKKGLARTPKEARMFVVHGHITLNGKKINSP 140
BLAST of EY665879 vs. ExPASy Swiss-Prot
Match: RS4_NATPD (30S ribosomal protein S4P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rps4p PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.905e-14 Identity = 48/136 (35.29%), Postives = 72/136 (52.94%), Query Frame = 2 Query: 98 KTFKKPRRPYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFE-GEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIP 502 K ++ P P++ ER+ E L+ YGL K ELWR Q L R AR L+ + + E G L R+ R G L++ ++ LD +L+L V + LERRLQT+ ++ G+ + AR I H+ V V+ P Sbjct: 8 KFYETPNHPFQGERIAEEGDLLSRYGLVNKEELWRAQSELRDYRREARRLIGEAQGDTVAAAEAGSEFLARLKRIGVLDD-EDSLDDILSLDVTDILERRLQTVAYRKGLGNTPQQARQFIAHGHVTVNGARVSAP 142
BLAST of EY665879 vs. ExPASy Swiss-Prot
Match: RS9_TOBAC (40S ribosomal protein S9 (Fragment) OS=Nicotiana tabacum GN=RPS9 PE=3 SV=1) HSP 1 Score: 53.1434 bits (126), Expect = 3.681e-11 Identity = 23/26 (88.46%), Postives = 26/26 (100.00%), Query Frame = 2 Query: 425 AKSIHHARVLIRQRHIRVGRQLVNIP 502 AKS+HHARVLIRQRHIRVGRQ+VN+P Sbjct: 1 AKSVHHARVLIRQRHIRVGRQVVNVP 26 HSP 2 Score: 36.1946 bits (82), Expect = 3.681e-11 Identity = 16/21 (76.19%), Postives = 19/21 (90.48%), Query Frame = 3 Query: 501 PSFVVRVDSQKPIEFSLTSPF 563 PSF+VR+DSQK I+FSL SPF Sbjct: 26 PSFMVRLDSQKHIDFSLISPF 46 The following BLAST results are available for this feature:
BLAST of EY665879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665879 ID=EY665879; Name=EY665879; organism=Citrus sinensis; type=EST; length=833bpback to top |