CK937484
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937484 vs. ExPASy Swiss-Prot
Match: Y1234_LACGA (UPF0161 protein LGAS_1234 OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=LGAS_1234 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.602e-11 Identity = 29/67 (43.28%), Postives = 44/67 (65.67%), Query Frame = 1 Query: 367 LSMLSFYKREISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGGSGFDP-PRWF 564 + +++ YK+ ISP++P +CRY PTCS Y + A KK+G + G ++ R+ RCNP G DP P +F Sbjct: 6 IGLVNVYKKFISPVLPPTCRYYPTCSTYMIDALKKHGAILGLIMGISRIIRCNPFIKGGVDPVPDYF 72
BLAST of CK937484 vs. ExPASy Swiss-Prot
Match: Y005_CHLTE (UPF0161 protein CT0005 OS=Chlorobium tepidum GN=CT0005 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.602e-11 Identity = 26/60 (43.33%), Postives = 41/60 (68.33%), Query Frame = 1 Query: 373 MLSFYKREISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGGSGFDP 552 ++ FY+ ISPL+ SC+Y PTCS Y+++A++++ + LT WR+ RCNP G+DP Sbjct: 8 LIRFYQSFISPLLGPSCKYHPTCSNYAIEAFRQHNFFYASWLTVWRVLRCNPFSKGGYDP 67
BLAST of CK937484 vs. ExPASy Swiss-Prot
Match: Y889_DESVM (UPF0161 protein DvMF_0889 OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=DvMF_0889 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.928e-11 Identity = 29/56 (51.79%), Postives = 39/56 (69.64%), Query Frame = 1 Query: 385 YKREISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGGSGFDP 552 Y+R ISP +P +CRYVPTCS Y+ +A +GVV+G +L RL RC+P G+DP Sbjct: 16 YQRFISPCLPPACRYVPTCSAYAAEAVLTHGVVRGLLLACRRLLRCHPWCAGGYDP 71
BLAST of CK937484 vs. ExPASy Swiss-Prot
Match: Y467_PELUB (UPF0161 protein SAR11_0467 OS=Pelagibacter ubique GN=SAR11_0467 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.928e-11 Identity = 29/66 (43.94%), Postives = 43/66 (65.15%), Query Frame = 1 Query: 367 LSMLSFYKREISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPL----GGSGFDP 552 + ++ FYK ISP + SCRY+PTCSEY+++ + YG+VK + R+ C+P+ GG GFDP Sbjct: 9 IGLIKFYKMVISPYLTPSCRYLPTCSEYTIECLRTYGLVKAISKSTKRIFSCHPIKILGGGEGFDP 74
BLAST of CK937484 vs. ExPASy Swiss-Prot
Match: Y3146_CHLAD (UPF0161 protein Cagg_3146 OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=Cagg_3146 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.928e-11 Identity = 28/62 (45.16%), Postives = 39/62 (62.90%), Query Frame = 1 Query: 367 LSMLSFYKREISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGGSGFDP 552 L ++ FY+ ISP P SC Y PTCS Y +A +KYG ++G +T R+ RC+P G+DP Sbjct: 7 LKLIRFYQVAISPWTPPSCIYTPTCSHYGYEAIQKYGALRGGWMTIKRIARCHPFARGGYDP 68
BLAST of CK937484 vs. ExPASy Swiss-Prot
Match: Y2031_CHLCH (UPF0161 protein Cag_2031 OS=Chlorobium chlorochromatii (strain CaD3) GN=Cag_2031 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.928e-11 Identity = 25/60 (41.67%), Postives = 40/60 (66.67%), Query Frame = 1 Query: 373 MLSFYKREISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGGSGFDP 552 ++ Y+ +SPL+ SC+YVPTCS Y+++A++++ LT WR+ RCNP G+DP Sbjct: 14 LIRLYRTFLSPLLGPSCKYVPTCSSYALEAFERHNFFYALWLTIWRILRCNPFSKGGYDP 73 The following BLAST results are available for this feature:
BLAST of CK937484 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 226
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937484 ID=CK937484; Name=CK937484; organism=Citrus sinensis; type=EST; length=665bpback to top |