CK937436

Overview
NameCK937436
Unique NameCK937436
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_STAAE (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain Newman) GN=metK PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.394e-39
Identity = 83/163 (50.92%), Postives = 109/163 (66.87%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED-------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNST 582
            LFTSESV EGHPDK+ DQ+SDA+LDA L+ DP ++VACET   T M ++ GEI+T   VD  K+VR+T + IG+     G D +   +L  I++QSPDIAQGV      R +D        GAGDQG MFGYAT+ET  +MPL+  L+ +L  RL++VRK+ T
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDAILKDDPNARVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKDSEEEIEATGAGDQGLMFGYATNETETYMPLAIYLSHQLAKRLSDVRKDGT 169          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_STAAC (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain COL) GN=metK PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.394e-39
Identity = 83/163 (50.92%), Postives = 109/163 (66.87%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED-------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNST 582
            LFTSESV EGHPDK+ DQ+SDA+LDA L+ DP ++VACET   T M ++ GEI+T   VD  K+VR+T + IG+     G D +   +L  I++QSPDIAQGV      R +D        GAGDQG MFGYAT+ET  +MPL+  L+ +L  RL++VRK+ T
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDAILKDDPNARVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKDSEEEIEATGAGDQGLMFGYATNETETYMPLAIYLSHQLAKRLSDVRKDGT 169          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_STAAB (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=metK PE=3 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 1.394e-39
Identity = 83/163 (50.92%), Postives = 109/163 (66.87%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED-------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNST 582
            LFTSESV EGHPDK+ DQ+SDA+LDA L+ DP ++VACET   T M ++ GEI+T   VD  K+VR+T + IG+     G D +   +L  I++QSPDIAQGV      R +D        GAGDQG MFGYAT+ET  +MPL+  L+ +L  RL++VRK+ T
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDAILKDDPNARVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKDSEEEIEATGAGDQGLMFGYATNETETYMPLAIYLSHQLAKRLSDVRKDGT 169          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_STAA9 (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain JH9) GN=metK PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.394e-39
Identity = 83/163 (50.92%), Postives = 109/163 (66.87%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED-------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNST 582
            LFTSESV EGHPDK+ DQ+SDA+LDA L+ DP ++VACET   T M ++ GEI+T   VD  K+VR+T + IG+     G D +   +L  I++QSPDIAQGV      R +D        GAGDQG MFGYAT+ET  +MPL+  L+ +L  RL++VRK+ T
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDAILKDDPNARVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKDSEEEIEATGAGDQGLMFGYATNETETYMPLAIYLSHQLAKRLSDVRKDGT 169          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_STAA8 (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain NCTC 8325) GN=metK PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.394e-39
Identity = 83/163 (50.92%), Postives = 109/163 (66.87%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED-------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNST 582
            LFTSESV EGHPDK+ DQ+SDA+LDA L+ DP ++VACET   T M ++ GEI+T   VD  K+VR+T + IG+     G D +   +L  I++QSPDIAQGV      R +D        GAGDQG MFGYAT+ET  +MPL+  L+ +L  RL++VRK+ T
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDAILKDDPNARVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKDSEEEIEATGAGDQGLMFGYATNETETYMPLAIYLSHQLAKRLSDVRKDGT 169          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_STAA3 (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain USA300) GN=metK PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.394e-39
Identity = 83/163 (50.92%), Postives = 109/163 (66.87%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED-------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNST 582
            LFTSESV EGHPDK+ DQ+SDA+LDA L+ DP ++VACET   T M ++ GEI+T   VD  K+VR+T + IG+     G D +   +L  I++QSPDIAQGV      R +D        GAGDQG MFGYAT+ET  +MPL+  L+ +L  RL++VRK+ T
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDAILKDDPNARVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKDSEEEIEATGAGDQGLMFGYATNETETYMPLAIYLSHQLAKRLSDVRKDGT 169          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_STAA2 (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain JH1) GN=metK PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.394e-39
Identity = 83/163 (50.92%), Postives = 109/163 (66.87%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED-------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNST 582
            LFTSESV EGHPDK+ DQ+SDA+LDA L+ DP ++VACET   T M ++ GEI+T   VD  K+VR+T + IG+     G D +   +L  I++QSPDIAQGV      R +D        GAGDQG MFGYAT+ET  +MPL+  L+ +L  RL++VRK+ T
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDAILKDDPNARVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKDSEEEIEATGAGDQGLMFGYATNETETYMPLAIYLSHQLAKRLSDVRKDGT 169          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_STAA1 (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=metK PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.394e-39
Identity = 83/163 (50.92%), Postives = 109/163 (66.87%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED-------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNST 582
            LFTSESV EGHPDK+ DQ+SDA+LDA L+ DP ++VACET   T M ++ GEI+T   VD  K+VR+T + IG+     G D +   +L  I++QSPDIAQGV      R +D        GAGDQG MFGYAT+ET  +MPL+  L+ +L  RL++VRK+ T
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDAILKDDPNARVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKDSEEEIEATGAGDQGLMFGYATNETETYMPLAIYLSHQLAKRLSDVRKDGT 169          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_POLSQ (S-adenosylmethionine synthetase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=metK PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.394e-39
Identity = 85/160 (53.12%), Postives = 110/160 (68.75%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTXXW 591
            + FTSESV+EGHPDK+ DQISDA+LDA L QDP ++VA ET   T +V++ GEITT A VDY ++ R+T R IG+ + D G+D   C VLV  ++QSPDIAQGV         D GAGDQG MFGYA DETSE MP+   L+ +L  R +++R++    W
Sbjct:    5 YFFTSESVSEGHPDKVADQISDAILDAILAQDPTARVAAETLCNTGLVVLAGEITTHANVDYIQVARNTLREIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGVDKAHDD-GLDQGAGDQGLMFGYACDETSELMPMPIHLSHRLVERQSQLRRDGRLNW 163          
BLAST of CK937436 vs. ExPASy Swiss-Prot
Match: METK_MYCSM (S-adenosylmethionine synthetase OS=Mycobacterium smegmatis GN=metK PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.394e-39
Identity = 95/161 (59.01%), Postives = 105/161 (65.22%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH-GHFTK-----RPEDI-GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 576
            LFTSESV EGHPDK+CD ISD+VLDA LEQDP+S+VA ET   T  V V GE+TT A  D  KIVRD    IG+ S   G D   C V V I  QSPDIAQGV   H T+      P D+ GAGDQG MFGYA  +T E MPL   LA +L  RLTEVRKN
Sbjct:    6 LFTSESVTEGHPDKICDAISDSVLDALLEQDPKSRVAVETLVTTGQVHVAGEVTTTAYADIPKIVRDRILDIGYDSSTKGFDGASCGVNVAIGAQSPDIAQGVDTAHETRVEGKADPLDLQGAGDQGLMFGYAIGDTPELMPLPIALAHRLARRLTEVRKN 166          
The following BLAST results are available for this feature:
BLAST of CK937436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_STAAE1.394e-3950.92S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAC1.394e-3950.92S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAB1.394e-3950.92S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAA91.394e-3950.92S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAA81.394e-3950.92S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAA31.394e-3950.92S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAA21.394e-3950.92S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAA11.394e-3950.92S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_POLSQ1.394e-3953.13S-adenosylmethionine synthetase OS=Polynucleobacte... [more]
METK_MYCSM1.394e-3959.01S-adenosylmethionine synthetase OS=Mycobacterium s... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004780_F08 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IVF_F08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937436 ID=CK937436; Name=CK937436; organism=Citrus sinensis; type=EST; length=593bp
GGGGGCCCAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTA
AGTCTGAATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATA
AGATGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCC
GACAAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGA
GCAGGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACA
TGGTCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAG
AAGATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGT
GGGTCTTGACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAA
GCCCGGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAG
GACATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGA
GACCTCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTG
CTCGTCTCACGGAGGTTAGGAAGAATAGTACCTGNNNTTGGCT
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