CK937376
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937376 vs. ExPASy Swiss-Prot
Match: 4CL2_ORYSJ (Probable 4-coumarate--CoA ligase 2 OS=Oryza sativa subsp. japonica GN=4CL2 PE=2 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 2.429e-20 Identity = 79/271 (29.15%), Postives = 123/271 (45.39%), Query Frame = 2 Query: 176 SIFYSKRKPVSLPPNESLDVTTFISSRAHHGRTAFIDAATGRHLTFSELWRAVDSVSTCLSDMGIRKGHVILLLSPNSIFFPVVCLAVMPLGAIITTTNPLNTKQEIAKQIADSKPVLAFTISQLVPKL--------------AGSTLPIVLLDDEKTTSTEGIKTVTTLP--QMMRKEPSGTLVRDRINQDDVATLLYSSGTTGASKGVVSSHRNLIAMVQTVLGGF--KLEDGE-QTFICTVPMFHIYGLAAFATGLLASGSTIVVLSK 931 ++F SK + +P + L F + I AATGR TF+E + L +G+ G +++L N + F V A LGA+ T NP T QEI KQ S L T S V KL TL ++ +DD++ T EG LP ++ G++ I+ DD L +SSGTTG KGVV +HR++++ V + G L G +C +P+FHI+ L + + +G+ + ++ + Sbjct: 26 TVFRSKLPDIDIPSHLPLHEYCFARAAELPDAPCLIAAATGRTYTFAETRLLCRRAAAALHRLGVGHGDRVMVLLQNCVEFAVAFFAASFLGAVTTAANPFCTPQEIHKQFKASGVKLILTQSVYVDKLRQHEAFPRIDACTVGDDTLTVITIDDDEAT-PEG-----CLPFWDLIADADEGSVPEVAISPDDPVALPFSSGTTGLPKGVVLTHRSVVSGVAQQVDGENPNLHMGAGDVALCVLPLFHIFSLNSVLLCAVRAGAAVALMPR 290
BLAST of CK937376 vs. ExPASy Swiss-Prot
Match: 4CL1_SOLTU (4-coumarate--CoA ligase 1 OS=Solanum tuberosum GN=4CL1 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 3.172e-20 Identity = 71/254 (27.95%), Postives = 112/254 (44.09%), Query Frame = 2 Query: 179 IFYSKRKPVSLPPNESLDVTTFISSRAHHGRTAFIDAATGRHLTFSELWRAVDSVSTCLSDMGIRKGHVILLLSPNSIFFPVVCLAVMPLGAIITTTNPLNTKQEIAKQIADSKPVLAFTISQLVPKLAGSTLPIVLLDDEKTTSTEGIKTVTTLPQMMRKEPSGTLVRDRINQDDVATLLYSSGTTGASKGVVSSHRNLIAMVQTVLGGFKLE---DGEQTFICTVPMFHIYGLAAFATGLLASGSTIVVLSK 931 IF SK + +P + L F + + R ID A R T++E+ V+ L+ +GI++ I++L PN F + LGAI T NPL T E+ KQ S + T + AG + +D K + + + + + +I DDV L YSSGTTG KGV+ +H+ L+ V + G + +C +P+FHIY L + L G+ I+++ K Sbjct: 14 IFRSKLPDIYIPKHLPLHSYCFENLSEFNSRPCLIDGANDRIYTYAEVELTSRKVAVGLNKLGIQQKDTIMILLPNCPEFVFAFIGASYLGAISTMANPLFTPAEVVKQAKASSAKIVITQA----CFAGKVKDYAIENDLKVICVDSVPEGCVHFSELIQSDEHEIPDVKIQPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENANLYMHSDDVLMCVLPLFHIYSLNSVLLCALRVGAAILIMQK 263
BLAST of CK937376 vs. ExPASy Swiss-Prot
Match: 4CL4_ORYSJ (Probable 4-coumarate--CoA ligase 4 OS=Oryza sativa subsp. japonica GN=4CL4 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 7.066e-20 Identity = 77/261 (29.50%), Postives = 118/261 (45.21%), Query Frame = 2 Query: 179 IFYSKRKPVSLPPNESLDVTTFISSRAHHGRTAFIDAATGRHLTFSELWRAVDSVSTCLSDMGIRKGHVILLLSPNSIFFPVVCLAVMPLGAIITTTNPLNTKQEIAKQIADSKPVLAFTISQLVPKLAGST----LPIVLLDDEKTTSTEGIKTVTTLPQMMRKEPSGTLVRDRINQDDVATLLYSSGTTGASKGVVSSHRNLIAMVQTVLGG------FKLEDGEQTFICTVPMFHIYGLAAFATGLLASGSTIVVLSK 931 +F SK + +P + +L F R ID TG ++ E+ + L +G+ KG V++ L N F L LGA TT NP T EI +Q + + + T + V K+ G +P+V +D + +G V M+ + ++ DDV L YSSGTTG KGV+ +HR+L+ V + G F+ ED +C +P+FHIY L + L +GS IV++ K Sbjct: 18 VFRSKLPDIEIPSHLTLQAYCFEKLPEVAARPCLIDGQTGAVYSYGEVEELSRRAAAGLRRLGVGKGDVVMSLLRNCPEFAFTFLGAARLGAATTTANPFYTPHEIHRQASAAGARVIVTEACAVEKVRGFAADRGIPVVAVDGD----FDG--CVGFGEAMLDASIEPLDADEEVHPDDVVALPYSSGTTGLPKGVMLTHRSLVTSVAQQVDGENPNLYFRRED---VVLCLLPLFHIYSLNSVLLAGLRAGSAIVIMRK 269
BLAST of CK937376 vs. ExPASy Swiss-Prot
Match: 4CL2_SOYBN (4-coumarate--CoA ligase 2 OS=Glycine max PE=2 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 9.229e-20 Identity = 70/265 (26.42%), Postives = 117/265 (44.15%), Query Frame = 2 Query: 167 KSNSIFYSKRKPVSLPPNESLDVTTFISSRAHHGRTAFIDAATGRHLTFSELWRAVDSVSTCLSDMGIRKGHVILLLSPNSIFFPVVCLAVMPLGAIITTTNPLNTKQEIAKQIADSKPVLAFTISQLVPKL-------AGSTLPIVLLDDEKTTSTEGIKTVTTLPQMMRKEPSGTLVRDRINQDDVATLLYSSGTTGASKGVVSSHRNLIAMVQTVLGGFKLE---DGEQTFICTVPMFHIYGLAAFATGLLASGSTIVVLSK 931 +++ +F SK + + + L F + R I + T+++ ++ LS++GI KG V+++L NS F LA+ +GA+ TT NP T EI KQ SK L T + V KL G +V +DD ++ + + I+ DD + +SSGTTG KGV+ +H++L V + G E +C +P+FHI+ L + L +GS ++++ K Sbjct: 22 QTSHVFKSKLPDIPISNHLPLHSYCFQNLSQFAHRPCLIVGPASKTFTYADTHLISSKIAAGLSNLGILKGDVVMILLQNSADFVFSFLAISMIGAVATTANPFYTAPEIFKQFTVSKAKLIITQAMYVDKLRNHDGAKLGEDFKVVTVDDPPENCLHF--------SVLSEANESDVPEVEIHPDDAVAMPFSSGTTGLPKGVILTHKSLTTSVAQQVDGENPNLYLTTEDVLLCVLPLFHIFSLNSVLLCALRAGSAVLLMQK 278
BLAST of CK937376 vs. ExPASy Swiss-Prot
Match: 4CL3_ORYSJ (Probable 4-coumarate--CoA ligase 3 OS=Oryza sativa subsp. japonica GN=4CL3 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.205e-19 Identity = 78/261 (29.89%), Postives = 116/261 (44.44%), Query Frame = 2 Query: 179 IFYSKRKPVSLPPNESLDVTTFISSRAHHGRTAFIDAATGRHLTFSELWRAVDSVSTCLSDMGIRKGHVILLLSPNSIFFPVVCLAVMPLGAIITTTNPLNTKQEIAKQIADSKPVLAFTISQLVPKL----AGSTLPIVLLDDEKTTSTEGIKTVTTLPQMMRKEPSGTLVRDRINQDDVATLLYSSGTTGASKGVVSSHRNLIAMVQTVLGG------FKLEDGEQTFICTVPMFHIYGLAAFATGLLASGSTIVVLSK 931 +F SK + + + +L F R ID TG T++E+ A + L MG+ KG V++ L N F L LGA TT NP T E+ +Q + + T + V K+ A +P+V +D E + V ++ ++ DDV L YSSGTTG KGV+ +HR+LI V + G F +D +C +P+FHIY L + L +GSTIV++ K Sbjct: 11 VFRSKLPDIEIDNSMTLQEYCFARMAEVGARPCLIDGQTGESYTYAEVESASRRAAAGLRRMGVGKGDVVMSLLRNCPEFAFSFLGAARLGAATTTANPFYTPHEVHRQAEAAGARVIVTEACAVEKVREFAAERGVPVVTVDGAFDGCVE-FREVLAAEELDADAD--------VHPDDVVALPYSSGTTGLPKGVMLTHRSLITSVAQQVDGENPNLYFSKDD---VILCLLPLFHIYSLNSVLLAGLRAGSTIVIMRK 259
BLAST of CK937376 vs. ExPASy Swiss-Prot
Match: 4CL2_TOBAC (4-coumarate--CoA ligase 2 OS=Nicotiana tabacum GN=4CL2 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.614e-18 Identity = 74/258 (28.68%), Postives = 115/258 (44.57%), Query Frame = 2 Query: 179 IFYSKRKPVSLPPNESLDVTTFISSRAHHGRTAFIDAATGRHLTFSELWRAVDSVSTCLSDMGIRKGHVILLLSPNSIFFPVVCLAVMPLGAIITTTNPLNTKQEIAKQIADSKPVLAFTISQLVPKLAG----STLPIVLLDDEKTTSTEGIKTVTTLPQMMRKEPSGTLVRDRINQDDVATLLYSSGTTGASKGVVSSHRNLIAMVQTVLGGFKLE---DGEQTFICTVPMFHIYGLAAFATGLLASGSTIVVLSK 931 IF SK + +P + L F + R I+ A + T++++ V+ L GI+ I++L PNS F + LGAI T NPL T E+ KQ S + T + V K+ + + I+ +D ++ EG + L Q + + I DDV L YSSGTTG KGV+ +H+ L+ V + G E +C +P+FHIY L + L G+ I+++ K Sbjct: 11 IFRSKLPDIYIPNHLPLHSYCFENISEFSSRPCLINGANKQIYTYADVELNSRKVAAGLHKQGIQPKDTIMILLPNSPEFVFAFIGASYLGAISTMANPLFTPAEVVKQAKASSAKIIVTQACHVNKVKDYAFENDVKIICID----SAPEGCLHFSVLTQANEHD----IPEVEIQPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYIHSEDVMLCVLPLFHIYSLNSVLLCGLRVGAAILIMQK 260
BLAST of CK937376 vs. ExPASy Swiss-Prot
Match: LCFA_BACSU (Long-chain-fatty-acid--CoA ligase OS=Bacillus subtilis GN=lcfA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.473e-17 Identity = 74/275 (26.91%), Postives = 129/275 (46.91%), Query Frame = 2 Query: 185 YSKRKPVSLP-PNESLDVTTFISSRAHHGRTAFIDAATGRHLTFSELWRAVDSVSTCLSDMGIRKGHVILLLSPNSIFFPVVCLAVMPLGAIITTTNPLNTKQEIAKQIADSKPVLAFTISQLVPK-LAGSTLPIV--------------------LLDDEKTTSTEGIKT--VTTLPQMMRKEPSGTLVRDRINQD-DVATLLYSSGTTGASKGVVSSHRNLIAMVQTVLGG-FKLEDGEQTFICTVPMFHIYGLAAFATGLLASGSTIVVLSK 931 Y P LP PN++L S+ +TA + G+ LTF ++ ++ L G++KG + ++ PN + V+ G I+ TNPL T+ E+ Q+ D++ + T+ L PK + TL IV L ++ + KT + T M++E + L +I+ + D+A L Y+ GTTGA KGV+ +H+N++A + + +++G + + VP FH+YGL A + G +++L K Sbjct: 11 YPNDIPHELPLPNKTLQSILTDSAARFPDKTAI--SFYGKKLTFHDILTDALKLAAFLQCNGLQKGDRVAVMLPNCPQTVISYYGVLFAGGIVVQTNPLYTEHELEYQLRDAQVSVIITLDLLFPKAIKMKTLSIVDQILITSVKDYLPFPKNILYPLTQKQKVHIDFDKTANIHTFASCMKQEKTELLTIPKIDPEHDIAVLQYTGGTTGAPKGVMLTHQNILANTEMCAAWMYDVKEGAEKVLGIVPFFHVYGLTAVMNYSIKLGFEMILLPK 283
BLAST of CK937376 vs. ExPASy Swiss-Prot
Match: LCFB_BACSU (Long-chain-fatty-acid--CoA ligase OS=Bacillus subtilis GN=lcfB PE=2 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 1.247e-16 Identity = 58/216 (26.85%), Postives = 103/216 (47.69%), Query Frame = 2 Query: 305 LTFSELWRAVDSVSTCLSDMGIRKGHVILLLSPNSIFFPVVCLAVMPLGAIITTTNPLNTKQEIAKQIADSKPVLAFTISQLVP--KLAGSTLPIVLL--------DDEKTTSTEGIKTVTTLPQMMRKEPSGTLVRDRINQDDVATLLYSSGTTGASKGVVSSHRNLIAMVQTVLGGFKLEDGEQTFICTVPMFHIYGLAAFATGLLASGSTIVV 922 +T+ EL + + L + G+ KG + LL NS F + + G ++ NPL T EI + + +SQL+P + +LP V L + + E +TT +++R + ++ + DD A +LY+SGTTG KG + +H+NL + V G +++ + +C +PMFH++ L L SG+T+++ Sbjct: 27 MTYQELNEYIQRFADGLQEAGMEKGDHLALLLGNSPDFIIAFFGALKAGIVVVPINPLYTPTEIGYMLTNGDVKAIVGVSQLLPLYESMHESLPKVELVILCQTGEAEPEAADPEVRMKMTTFAKILRPTSAAKQNQEPV-PDDTAVILYTSGTTGKPKGAMLTHQNLYSNANDVAGYLGMDERDNV-VCALPMFHVFCLTVCMNAPLMSGATVLI 240
BLAST of CK937376 vs. ExPASy Swiss-Prot
Match: LCFA_SALTY (Long-chain-fatty-acid--CoA ligase OS=Salmonella typhimurium GN=fadD PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.072e-15 Identity = 63/259 (24.32%), Postives = 116/259 (44.79%), Query Frame = 2 Query: 194 RKPVSLPPNESLDVTTFISSRAHHGRTAFIDAAT----GRHLTFSELWRAVDSVSTCLSD-MGIRKGHVILLLSPNSIFFPVVCLAVMPLGAIITTTNPLNTKQEIAKQIADSKPV-------LAFTISQLVPKLAGSTLPIVLLDDEKTTSTEGIKTVTTLPQMMRKEPSGTL------------------VRDRINQDDVATLLYSSGTTGASKGVVSSHRNLIAMVQTVLG--GFKLEDGEQTFICTVPMFHIYGL 874 R P +P + D + H T + D G +TF +L + + L +G++KG + L+ PN + +PV ++ G I+ NPL T +E+ Q+ DS A T+ ++V K + + + + D+ +T+ +G + + R P L V+ + +D+A L Y+ GTTG +KG + +HRN++A ++ V G L G++ + +P++HI+ L Sbjct: 8 RYPADVPAEINPDRYQSLVELFEHAATRYADQPAFVNMGEVMTFRKLEERSRAFAAYLQQGLGLKKGDRVALMMPNLLQYPVALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAAAIIIVSNFAHTLEKVVEKTSVQHVILTRMGDQLSTA-KGTVVNFVVKYIKRLVPKYHLPDAISFRSALQHGYRMQYVKPEVVAEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQVKATYGPLLHPGKELVVTALPLYHIFAL 265
BLAST of CK937376 vs. ExPASy Swiss-Prot
Match: LCFA_SALTI (Long-chain-fatty-acid--CoA ligase OS=Salmonella typhi GN=fadD PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.072e-15 Identity = 63/259 (24.32%), Postives = 116/259 (44.79%), Query Frame = 2 Query: 194 RKPVSLPPNESLDVTTFISSRAHHGRTAFIDAAT----GRHLTFSELWRAVDSVSTCLSD-MGIRKGHVILLLSPNSIFFPVVCLAVMPLGAIITTTNPLNTKQEIAKQIADSKPV-------LAFTISQLVPKLAGSTLPIVLLDDEKTTSTEGIKTVTTLPQMMRKEPSGTL------------------VRDRINQDDVATLLYSSGTTGASKGVVSSHRNLIAMVQTVLG--GFKLEDGEQTFICTVPMFHIYGL 874 R P +P + D + H T + D G +TF +L + + L +G++KG + L+ PN + +PV ++ G I+ NPL T +E+ Q+ DS A T+ ++V K + + + + D+ +T+ +G + + R P L V+ + +D+A L Y+ GTTG +KG + +HRN++A ++ V G L G++ + +P++HI+ L Sbjct: 8 RYPADVPAEINPDRYQSLVELFEHAATRYADQPAFVNMGEVMTFRKLEERSRAFAAYLQQGLGLKKGDRVALMMPNLLQYPVALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAAAIIIVSNFAHTLEKVVEKTSVQHVILTRMGDQLSTA-KGTVVNFVVKYIKRLVPKYHLPDAISFRSALQHGYRMQYVKPEVVAEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQVKATYGPLLHPGKELVVTALPLYHIFAL 265 The following BLAST results are available for this feature:
BLAST of CK937376 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 79
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK937376 ID=CK937376; Name=CK937376; organism=Citrus sinensis; type=EST; length=932bpback to top |