EY665872

Overview
NameEY665872
Unique NameEY665872
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length840
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY665872 vs. ExPASy Swiss-Prot
Match: LLDD_ECO57 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O157:H7 GN=lldD PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.637e-20
Identity = 58/173 (33.53%), Postives = 85/173 (49.13%), Query Frame = 3 
Query:  108 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIQNRFTLP 626
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT+   K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGP 175
[Close]
BLAST of EY665872 vs. ExPASy Swiss-Prot
Match: LLDD_ECO55 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain 55989 / EAEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.637e-20
Identity = 58/173 (33.53%), Postives = 85/173 (49.13%), Query Frame = 3 
Query:  108 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIQNRFTLP 626
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT+   K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGP 175
[Close]
BLAST of EY665872 vs. ExPASy Swiss-Prot
Match: LLDD_ECO24 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.637e-20
Identity = 58/173 (33.53%), Postives = 85/173 (49.13%), Query Frame = 3 
Query:  108 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIQNRFTLP 626
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT+   K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +DR  +   + RA+ AG   +  TVD P  G R  D  +  + P
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGP 175
[Close]
BLAST of EY665872 vs. ExPASy Swiss-Prot
Match: LLDD_CAUCR (L-lactate dehydrogenase [cytochrome] OS=Caulobacter crescentus GN=lldD PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.637e-20
Identity = 55/173 (31.79%), Postives = 88/173 (50.87%), Query Frame = 3 
Query:  108 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIQNRFTLP 626
            +++  ++   A+ +LP+ +FDY   GA  + T+  N +  + I  R R+L+DVS +D STT+ G + ++P+ +AP  +  M    GE          G    LS+ S   V+EV +      +FQLYV +DR  +  L+ RA  AG   +  TVD P  G R  D  +  + P
Sbjct:    3 VSSTTDFREAARRRLPRFLFDYIDGGAYAERTMARNIDDLADIALRQRVLMDVSVVDPSTTLFGVRQALPVALAPVGLTGMYARRGECQAARAAAAKGVPFCLSTVSVCDVDEVRAASATPFWFQLYVLRDRGFMRDLLARASAAGATTLVFTVDMPVPGARYRDAHSGMSGP 175
[Close]
BLAST of EY665872 vs. ExPASy Swiss-Prot
Match: LLDD_CAUCN (L-lactate dehydrogenase [cytochrome] OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=lldD PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.637e-20
Identity = 55/173 (31.79%), Postives = 88/173 (50.87%), Query Frame = 3 
Query:  108 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIQNRFTLP 626
            +++  ++   A+ +LP+ +FDY   GA  + T+  N +  + I  R R+L+DVS +D STT+ G + ++P+ +AP  +  M    GE          G    LS+ S   V+EV +      +FQLYV +DR  +  L+ RA  AG   +  TVD P  G R  D  +  + P
Sbjct:    3 VSSTTDFREAARRRLPRFLFDYIDGGAYAERTMARNIDDLADIALRQRVLMDVSVVDPSTTLFGVRQALPVALAPVGLTGMYARRGECQAARAAAAKGVPFCLSTVSVCDVDEVRAASATPFWFQLYVLRDRGFMRDLLARASAAGATTLVFTVDMPVPGARYRDAHSGMSGP 175
[Close]
BLAST of EY665872 vs. ExPASy Swiss-Prot
Match: LLDD_YERPY (L-lactate dehydrogenase [cytochrome] OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=lldD PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.056e-20
Identity = 62/198 (31.31%), Postives = 94/198 (47.47%), Query Frame = 3 
Query:  123 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIQNRFTLPPFLTLKNFQGL-------DLGKMDKANDSG 695
            +Y A A+ KLP  +F Y   GA ++ TL+ N    + I  R R+L ++S++ + T + G   +MP+++ P  +  M    GE          G   TLS+ S   +EEVA       +FQLYV KDR  +   + RA+ AG K +  TVD P  G R  D  +  + P     +  Q +       D+G   K +D G
Sbjct:    8 DYRAAAQRKLPPFLFHYIDGGAYNEQTLRRNTADLADIALRQRVLKNMSELSLETQLFGETQAMPVVLGPVGLSGMYARRGEVQAARAADKKGIPFTLSTLSVCPIEEVAPAIARPMWFQLYVLKDRGFMRNALTRAQAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPHDLG 205
[Close]
BLAST of EY665872 vs. ExPASy Swiss-Prot
Match: LLDD_YERPS (L-lactate dehydrogenase [cytochrome] OS=Yersinia pseudotuberculosis GN=lldD PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.056e-20
Identity = 62/198 (31.31%), Postives = 94/198 (47.47%), Query Frame = 3 
Query:  123 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIQNRFTLPPFLTLKNFQGL-------DLGKMDKANDSG 695
            +Y A A+ KLP  +F Y   GA ++ TL+ N    + I  R R+L ++S++ + T + G   +MP+++ P  +  M    GE          G   TLS+ S   +EEVA       +FQLYV KDR  +   + RA+ AG K +  TVD P  G R  D  +  + P     +  Q +       D+G   K +D G
Sbjct:    8 DYRAAAQRKLPPFLFHYIDGGAYNEQTLRRNTADLADIALRQRVLKNMSELSLETQLFGETQAMPVVLGPVGLSGMYARRGEVQAARAADKKGIPFTLSTLSVCPIEEVAPAIARPMWFQLYVLKDRGFMRNALTRAQAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPHDLG 205
[Close]
BLAST of EY665872 vs. ExPASy Swiss-Prot
Match: LLDD_YERPP (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis (strain Pestoides F) GN=lldD PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.056e-20
Identity = 62/198 (31.31%), Postives = 94/198 (47.47%), Query Frame = 3 
Query:  123 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIQNRFTLPPFLTLKNFQGL-------DLGKMDKANDSG 695
            +Y A A+ KLP  +F Y   GA ++ TL+ N    + I  R R+L ++S++ + T + G   +MP+++ P  +  M    GE          G   TLS+ S   +EEVA       +FQLYV KDR  +   + RA+ AG K +  TVD P  G R  D  +  + P     +  Q +       D+G   K +D G
Sbjct:    8 DYRAAAQRKLPPFLFHYIDGGAYNEQTLRRNTADLADIALRQRVLKNMSELSLETQLFGETQAMPVVLGPVGLSGMYARRGEVQAARAADKKGIPFTLSTLSVCPIEEVAPAIARPMWFQLYVLKDRGFMRNALTRAQAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPHDLG 205
[Close]
BLAST of EY665872 vs. ExPASy Swiss-Prot
Match: LLDD_YERPN (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=lldD PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.056e-20
Identity = 62/198 (31.31%), Postives = 94/198 (47.47%), Query Frame = 3 
Query:  123 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIQNRFTLPPFLTLKNFQGL-------DLGKMDKANDSG 695
            +Y A A+ KLP  +F Y   GA ++ TL+ N    + I  R R+L ++S++ + T + G   +MP+++ P  +  M    GE          G   TLS+ S   +EEVA       +FQLYV KDR  +   + RA+ AG K +  TVD P  G R  D  +  + P     +  Q +       D+G   K +D G
Sbjct:    8 DYRAAAQRKLPPFLFHYIDGGAYNEQTLRRNTADLADIALRQRVLKNMSELSLETQLFGETQAMPVVLGPVGLSGMYARRGEVQAARAADKKGIPFTLSTLSVCPIEEVAPAIARPMWFQLYVLKDRGFMRNALTRAQAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPHDLG 205
[Close]
BLAST of EY665872 vs. ExPASy Swiss-Prot
Match: LLDD_YERPG (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis bv. Antiqua (strain Angola) GN=lldD PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.056e-20
Identity = 62/198 (31.31%), Postives = 94/198 (47.47%), Query Frame = 3 
Query:  123 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMSTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIQNRFTLPPFLTLKNFQGL-------DLGKMDKANDSG 695
            +Y A A+ KLP  +F Y   GA ++ TL+ N    + I  R R+L ++S++ + T + G   +MP+++ P  +  M    GE          G   TLS+ S   +EEVA       +FQLYV KDR  +   + RA+ AG K +  TVD P  G R  D  +  + P     +  Q +       D+G   K +D G
Sbjct:    8 DYRAAAQRKLPPFLFHYIDGGAYNEQTLRRNTADLADIALRQRVLKNMSELSLETQLFGETQAMPVVLGPVGLSGMYARRGEVQAARAADKKGIPFTLSTLSVCPIEEVAPAIARPMWFQLYVLKDRGFMRNALTRAQAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPHDLG 205
The following BLAST results are available for this feature:
BLAST of EY665872 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD_ECO574.637e-2033.53L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO554.637e-2033.53L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO244.637e-2033.53L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_CAUCR4.637e-2031.79L-lactate dehydrogenase [cytochrome] OS=Caulobacte... [more]
LLDD_CAUCN4.637e-2031.79L-lactate dehydrogenase [cytochrome] OS=Caulobacte... [more]
LLDD_YERPY6.056e-2031.31L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPS6.056e-2031.31L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPP6.056e-2031.31L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPN6.056e-2031.31L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPG6.056e-2031.31L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-006-F02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665872 ID=EY665872; Name=EY665872; organism=Citrus sinensis; type=EST; length=840bp
ATCATCGTCTTCTCTCCACTGGTTTCTCTGAATGCACTTTGCTGCACAGT
CTTTGTAAACCTTAGATTAATTTAAGTAGAAAACAGTCAACTGTCAAGAT
GGGGGAGATCACAAATGTGATGGAGTATGAGGCCATTGCCAAGGAAAAGT
TGCCAAAGATGGTGTTTGATTACTATGCTTCAGGTGCAGAGGACCAGTGG
ACTTTGCAAGAGAACAGGAATGCTTTCTCAAGAATCCTGTTTCGACCTCG
CATTCTGATTGATGTAAGCAAAATAGACATGAGTACCACTGTCTTGGGCT
TCAAGATATCGATGCCAATCATGATTGCCCCAACAGCCATGCAGAAGATG
GCTCATCCTGAAGGGGAGTATGCTACAGCTAGAGCTGCATCGGCTGCTGG
AACGATTATGACATTGTCTTCGTGGTCTACTTCTAGCGTTGAAGAGGTTG
CTTCAACAGGACCTGGCATCCGCTTTTTCCAGCTCTATGTGTACAAGGAC
AGGAATGTGGTTGCTCAGCTTGTGAGAAGGGCTGAAAGAGCCGGATTCAA
GGCCATTGCTCTAACAGTTGATACCCCGAGGCTGGGTCGCAGAGAAGCTG
ACATCCAAAACAGATTCACTCTACCACCATTTTTGACATTAAAGAATTTT
CAGGGTTTGGACCTTGGCAAGATGGACAAGGCAAATGACTCTGGGGCTTG
CTGCCTATGTTGCTGGCGCAATTTAATCGTTCCTCTGAAGCTGGAAGGAC
GTGAAAGTGGGTTTCCAACAATCCCCCAATTTGCCCATTTTGGCGGAAGG
GGTGGTATCCCAAATAAAAGCGAGGGGCCGAATATGGCCC
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