CK937343
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: GLPF_ECOLI (Glycerol uptake facilitator protein OS=Escherichia coli (strain K12) GN=glpF PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.539e-12 Identity = 59/212 (27.83%), Postives = 91/212 (42.92%), Query Frame = 2 Query: 245 IAEFMATFLFLY-----ITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKG------FEGSKNYERLGGGANVVAHGYTKG----------DGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAI 817 IAEF+ T L ++ + L V G S + S + G+A A +Y TAG+SG H+NPAVT L L + + ++V Q GA C A +V G F+ + + + G V T E++ T +L+ + + TD LAPL IG + ++ + P+TG +NPAR G + Sbjct: 12 IAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIWGLGVAMA--------IYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRGP---LAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKV 212
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: GLPF_ECOL6 (Glycerol uptake facilitator protein OS=Escherichia coli O6 GN=glpF PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.539e-12 Identity = 59/212 (27.83%), Postives = 91/212 (42.92%), Query Frame = 2 Query: 245 IAEFMATFLFLY-----ITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKG------FEGSKNYERLGGGANVVAHGYTKG----------DGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAI 817 IAEF+ T L ++ + L V G S + S + G+A A +Y TAG+SG H+NPAVT L L + + ++V Q GA C A +V G F+ + + + G V T E++ T +L+ + + TD LAPL IG + ++ + P+TG +NPAR G + Sbjct: 12 IAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIWGLGVAMA--------IYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRGP---LAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKV 212
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: GLPF_ECO57 (Glycerol uptake facilitator protein OS=Escherichia coli O157:H7 GN=glpF PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.539e-12 Identity = 59/212 (27.83%), Postives = 91/212 (42.92%), Query Frame = 2 Query: 245 IAEFMATFLFLY-----ITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKG------FEGSKNYERLGGGANVVAHGYTKG----------DGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAI 817 IAEF+ T L ++ + L V G S + S + G+A A +Y TAG+SG H+NPAVT L L + + ++V Q GA C A +V G F+ + + + G V T E++ T +L+ + + TD LAPL IG + ++ + P+TG +NPAR G + Sbjct: 12 IAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIWGLGVAMA--------IYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRGP---LAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKV 212
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: TIP42_ORYSJ (Probable aquaporin TIP4-2 OS=Oryza sativa subsp. japonica GN=TIP4-2 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 2.010e-12 Identity = 64/213 (30.05%), Postives = 95/213 (44.60%), Query Frame = 2 Query: 200 FEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAG--ISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKG----DGLGAEIIGTFVLVYTVFSA-TDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAI 817 +EPG L RA E + TFLF++I V + + K+ A A + V TAG +SGGH+NPAVT L + ++L R+ Y+ Q G+ +++ L GGA H G G+ AE + TF L+ + + D +R A P+L L +G +A +TG +NPARS G A+ Sbjct: 18 WEPGCL------RAVAGELLFTFLFVFIGVASTITAGKAAGGAGEAAAVTAA-AMAQALVVAVLATAGFHVSGGHLNPAVTLSLAVGGHITLFRSALYVAAQLAGSSLACLLLR---------CLTGGAATPVHALADGVGPVQGVAAEAVFTFTLLLVICATILDPRRAAPPGTGPLLTGLLVGANT----VAGGALTGASMNPARSFGPAL 210
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: NIP12_ARATH (Aquaporin NIP1-2 OS=Arabidopsis thaliana GN=NIP1-2 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 4.477e-12 Identity = 59/211 (27.96%), Postives = 95/211 (45.02%), Query Frame = 2 Query: 194 PLFEPGELKSWS--FYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 820 PL + L S S F + +AE + T+ FL + V+ + K T + GIA +G + LVY ISG H NPAVT + L + Y++ Q +G+ A ++ G + + G +V G L + +I + Y +F + + R + LA L +G V L + P++G +NP RSLG A++ Sbjct: 36 PLKKQDSLLSISVPFLQKLMAEVLGTY-FLIFAGCAAVAVNTQHDKAVT--LPGIAIVWGLTVMVLVYSLGHISGAHFNPAVTIAFASCGRFPLKQVPAYVISQVIGSTLAAATLRLLFG-LDQDVCSGKHDVFVGTLPSGSNLQSFVIEFIITFYLMFVISGVATDNR--AIGELAGLAVGSTVLLNVIIAGPVSGASMNPGRSLGPAMV 240
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: GLPF_PSEAE (Glycerol uptake facilitator protein OS=Pseudomonas aeruginosa GN=glpF PE=3 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 4.477e-12 Identity = 56/214 (26.17%), Postives = 96/214 (44.86%), Query Frame = 2 Query: 227 SFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVK--------GFEGSKNYERLGGGANVVAHGYTK--------GDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 820 S + +AEF+ T L ++ V + + ++ G+ I+ +G + +Y +AG+SG H+NPAV+ L L + FY+ Q GA C A +V FE ++N R + +A ++ G E++ T +L+ + + TD LAPL IG + ++ A P+TG +NPAR G ++ Sbjct: 9 SLFGQCLAEFLGTALLIFFGTGCVAALKVAG---ASFGLWEISIIWGVGVSMAIYLSAGVSGAHLNPAVSIALWLFAGFEGRKLPFYITAQVAGAFCAAALVYTLYSSLFIEFEQAQNIVRGSQDSLALASVFSTYPHPALSVGQAFLVEVVITAILMAVIMALTDDGNGLPRGP---LAPLLIGLLIAVIGSAMGPLTGFAMNPARDFGPKLM 216
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: AQPM_ARCFU (Probable aquaporin aqpM OS=Archaeoglobus fulgidus GN=aqpM PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.477e-12 Identity = 62/201 (30.85%), Postives = 85/201 (42.29%), Query Frame = 2 Query: 248 AEFMATFLFLY-------ITVLTVMGVSKSNTKCSTVGIQG-------IAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLG 808 AE + TF+ ++ IT++ G K N +G G I AF I A++Y ISG HINPAVT L + V Y+V Q +GA G+ + G G GA G G + E IGTF+L+ + +R P A L IG V + ITG+ +NPAR+ G Sbjct: 11 AEVVGTFILVFFGPGAAVITLMIANGADKPNEFNIGIGALGGLGDWFAIGMAFALAIAAVIYSLGRISGAHINPAVTIALWSIGRFPGREVVPYIVAQFIGAALGSLLFLACVGPAAATVGGLGATAPFPGIGYGQAILTEAIGTFLLMLVIMGVAVDERAP-----PGFAGLVIGLTVGGIITTIGNITGSSLNPARTFG 206
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: NIP31_ORYSJ (Aquaporin NIP3-1 OS=Oryza sativa subsp. japonica GN=NIP3-1 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 5.848e-12 Identity = 56/191 (29.32%), Postives = 84/191 (43.98%), Query Frame = 2 Query: 248 AEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAI 817 AEF+ TF+ ++ + K S G A G + ++ T ISG H+NP++T R + Y+ +Q LG++C +KG + L GG V + E I TF L++ V + ATD + V LA + +G AV L L P TG +NP R+LG A+ Sbjct: 87 AEFVGTFILIFFATAAPIVNQKYGGAISPFGNAACA---GLAVTTIILSTGHISGAHLNPSLTIAFAALRHFPWLQVPAYVAVQVLGSICAGFALKGV----FHPFLSGGVTVPDPTISTAQAFFTEFIITFNLLFVVTAVATDTRA------VGELAGIAVGAAVTLNILIAGPTTGGSMNPVRTLGPAV 264
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: NIP13_ORYSJ (Aquaporin NIP1-3 OS=Oryza sativa subsp. japonica GN=NIP1-3 PE=3 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 5.848e-12 Identity = 61/201 (30.35%), Postives = 85/201 (42.29%), Query Frame = 2 Query: 221 SWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 820 S F + IAE + TF FL + V+K TV GI +G + +VY ISG H+NPAVT + R Y Q G+ + ++ G G A + L E I TF L++ V ATD + + LA L +G V + L PI+G +NPAR++G AII Sbjct: 49 SVQFAQKVIAEILGTF-FLIFAGCAAVAVNKRTG--GTVTFPGICITWGLAVMVMVYSVGHISGAHLNPAVTLAFATCGRFPWRRVPAYAAAQVAGSAAASAALRALFGGAPEHFFG-----TAPAGSDVQSLAMEFIITFYLMFVVSGVATDNRA------IGELAGLAVGATVLVNVLFAGPISGASMNPARTIGPAII 235
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: NIP11_MAIZE (Aquaporin NIP1-1 OS=Zea mays GN=NIP1-1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.848e-12 Identity = 56/198 (28.28%), Postives = 94/198 (47.47%), Query Frame = 2 Query: 230 FYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 820 F + IAE T+ ++ V+ + +K + G+A +G + +VY ISG H NPAVT + + + Y++ Q LGA +G ++ G + +E G + G ++ L EII TF L++ + ATD + + LA L +G + L L P++G +NPARS+G A++ Sbjct: 42 FIQKIIAEIFGTYFLMFAGC---GAVTINASKNGQITFPGVAIVWGLAVMVMVYAVGHISGAHFNPAVTLAFATSGRFPWRQLPAYVLAQMLGATLASGTLRLMFGGR-HEHFPG---TLPTG-SEVQSLVIEIITTFYLMFVISGVATDNRA------IGELAGLAVGATILLNVLIAGPVSGASMNPARSVGPALV 225 The following BLAST results are available for this feature:
BLAST of CK937343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 191
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937343 ID=CK937343; Name=CK937343; organism=Citrus sinensis; type=EST; length=822bpback to top |