CK937343

Overview
NameCK937343
Unique NameCK937343
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 8.250e-91
Identity = 164/225 (72.89%), Postives = 183/225 (81.33%), Query Frame = 2
Query:  146 GTSAQSDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 820
            G   Q  KDY +PPPAP F+ GELK WSF+RA IAEF+AT LFLYITV TV+G  K    C++VG+ GIAW+FGGMIF LVYCTAGISGGHINPAVTFGL LARK+SL RA+ YM+ QC GA+CG G+VK F     Y + GGGAN VA GY KG   GAE+IGTFVLVYTVFSATD KR+ARDSHVPILAPLPIGFAVF+VHLATIPITGTGINPARS GAA+I
Sbjct:   10 GQVHQHGKDYVDPPPAPFFDMGELKLWSFWRAAIAEFIATLLFLYITVATVIGYKKETDPCASVGLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLLRALVYMIAQCAGAICGVGLVKAFMKGP-YNQFGGGANSVALGYNKGTAFGAELIGTFVLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVI 233          
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 332.028 bits (850), Expect = 2.400e-90
Identity = 165/226 (73.01%), Postives = 187/226 (82.74%), Query Frame = 2
Query:  167 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMG--------VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 820
            KDY +PPPAPL +  EL SWS YRA IAEF+AT LFLYITV TV+G         S ++  C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK+SL RA+ Y+V QCLGA+CG G+VK F+ S  ++R GGGAN +A GY++G GLGAEIIGTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARSLGAA+I
Sbjct:   19 KDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKAFQ-SAYFDRYGGGANSLASGYSRGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVI 243          
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 331.257 bits (848), Expect = 4.095e-90
Identity = 169/231 (73.16%), Postives = 185/231 (80.09%), Query Frame = 2
Query:  146 GTSAQSDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVS-KSNTK-----CSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 820
            G      +DY++PPP P F+  EL  WS YRA IAEF+AT LFLYITVLTV+G   +S+TK     C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK+SL RAV YMV QCLGA+CG G VK F+ S  Y+R GGGAN +A GY  G GL AEIIGTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+I
Sbjct:    7 GPEGFQTRDYEDPPPTPFFDADELTKWSLYRAVIAEFVATLLFLYITVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQSSY-YDRYGGGANSLADGYNTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVI 236          
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1)

HSP 1 Score: 330.487 bits (846), Expect = 6.984e-90
Identity = 165/226 (73.01%), Postives = 185/226 (81.86%), Query Frame = 2
Query:  167 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMG--------VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 820
            KDY +PPPAPL +  EL SWS YRA IAEF+AT LFLYITV TV+G         S ++  C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK+SL RA+ Y+V QCLGA+CG G+VK F+ S  + R GGGAN +A GY+KG GL AEIIGTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS+GAA+I
Sbjct:   19 KDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAICGVGLVKAFQ-SAYFNRYGGGANTLAAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVI 243          
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 1.191e-89
Identity = 166/231 (71.86%), Postives = 186/231 (80.52%), Query Frame = 2
Query:  152 SAQSDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMG--------VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 820
            +A   KDY +PPPAPL +  EL  WS YRA IAEF+AT LFLYITV TV+G         S  +  C  VG+ GIAWAFGGMIF LVYCTAG+SGGHINPAVTFGL LARK+SL RA+ Y+V QCLGA+CG G+VKGF+ S  Y R GGGAN ++ GY+KG GL AEIIGTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+I
Sbjct:    9 AAHEGKDYSDPPPAPLVDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKGFQ-SAFYVRYGGGANELSAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVI 238          
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 1.191e-89
Identity = 163/228 (71.49%), Postives = 186/228 (81.58%), Query Frame = 2
Query:  167 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSK----------SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 820
            KDY +PPPAPL +  EL SWS YRA IAEF+AT LFLY+TV TV+G             ++  C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK+SL RA+ YMV QCLGAVCG G+VK F+ S  ++R GGGAN +A GY++G GLGAEI+GTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARSLGAA++
Sbjct:   19 KDYTDPPPAPLVDAAELGSWSLYRAVIAEFIATLLFLYVTVATVIGYKHQTDASASGAGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMVAQCLGAVCGVGLVKAFQ-SAYFDRYGGGANSLASGYSRGAGLGAEIVGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVV 245          
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 329.331 bits (843), Expect = 1.556e-89
Identity = 166/220 (75.45%), Postives = 183/220 (83.18%), Query Frame = 2
Query:  167 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMG--VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 820
            KDY +PPPAPLF+ GEL+ WSFYRA IAEF+AT LFLYITV TV+G  V  S  +C  VG  GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLLLARK+S+ RAV Y+V QCLG + G G+VKG      Y   GGGAN+VA GY+ G  LGAEIIGTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS+GAA+I
Sbjct:   15 KDYTDPPPAPLFDVGELRLWSFYRALIAEFIATLLFLYITVATVIGYKVQSSADQCGGVGTLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGVGIVKGIM-KHQYNANGGGANMVASGYSTGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVI 233          
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 328.561 bits (841), Expect = 2.654e-89
Identity = 166/228 (72.81%), Postives = 185/228 (81.14%), Query Frame = 2
Query:  161 SDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMG--------VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 820
            S KDY +PPPAPL +  EL  WS YRA IAEF+AT LFLYITV TV+G         S  +  C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK+SL RA+ Y++ QCLGA+CG G+VKGF+ S  Y R GGGAN ++ GY+KG GL AEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+I
Sbjct:   17 SAKDYTDPPPAPLIDADELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQ-SAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVI 243          
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 328.561 bits (841), Expect = 2.654e-89
Identity = 167/231 (72.29%), Postives = 184/231 (79.65%), Query Frame = 2
Query:  146 GTSAQSDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVS-KSNTK-----CSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 820
            G      +DY++PPP P F+  EL  WS YRA IAEF+AT LFLY+TVLTV+G   +S+TK     C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK+SL RAV YMV QCLGA+CG G VK F+ S +Y   GGGAN +A GY  G GL AEIIGTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+I
Sbjct:    7 GPDGFQTRDYEDPPPTPFFDAEELTKWSLYRAVIAEFVATLLFLYVTVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQSS-HYVNYGGGANFLADGYNTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVI 236          
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 3.466e-89
Identity = 166/228 (72.81%), Postives = 185/228 (81.14%), Query Frame = 2
Query:  161 SDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMG--------VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 820
            S KDY +PPPAPL +  EL  WS YRA IAEF+AT LFLYITV TV+G         S  +  C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK+SL RA+ Y++ QCLGA+CG G+VKGF+ S  Y R GGGAN ++ GY+KG GL AEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+I
Sbjct:   16 SAKDYTDPPPAPLIDAEELTQWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQ-SAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVI 242          
The following BLAST results are available for this feature:
BLAST of CK937343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 191
Match NameE-valueIdentityDescription
PIP1_ATRCA8.250e-9172.89Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1[more]
PIP21_MAIZE2.400e-9073.01Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]
PIP22_ARATH4.095e-9073.16Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2... [more]
PIP21_ORYSJ6.984e-9073.01Probable aquaporin PIP2-1 OS=Oryza sativa subsp. j... [more]
PIP25_MAIZE1.191e-8971.86Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP22_MAIZE1.191e-8971.49Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1[more]
PIP26_ORYSJ1.556e-8975.45Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]
PIP23_MAIZE2.654e-8972.81Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP23_ARATH2.654e-8972.29Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3... [more]
PIP24_MAIZE3.466e-8972.81Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004511_B06 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIF_B06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937343 ID=CK937343; Name=CK937343; organism=Citrus sinensis; type=EST; length=822bp
GGGGGCTACGCTACATACACAACACAAACACAGCATCTTCTTTGAGAGAA
TAAGGGAGCGAGAGAGAGGTTCATCATCGTCAATGGAGGGCAAAGAAGAG
GATGTTAAGCTAGGAGCTAACAAGTTCTCAGAGAGGCAACCCATTGGGAC
ATCAGCTCAATCAGACAAAGACTACAAGGAGCCACCACCAGCACCTTTGT
TTGAGCCTGGTGAGCTCAAGTCATGGTCTTTTTACAGAGCTGGTATTGCA
GAGTTCATGGCTACCTTCTTGTTCCTCTACATCACTGTCTTGACTGTCAT
GGGTGTCTCTAAGTCTAACACCAAGTGCTCCACTGTCGGTATCCAAGGAA
TTGCTTGGGCCTTTGGTGGCATGATCTTTGCGCTTGTTTACTGCACTGCT
GGTATCTCAGGAGGACACATCAACCCAGCAGTGACCTTCGGTCTGCTGCT
AGCGAGGAAGCTTTCCCTGACAAGGGCTGTCTTCTACATGGTCATGCAGT
GCCTTGGTGCTGTCTGTGGTGCTGGTGTTGTCAAGGGATTCGAAGGTTCA
AAGAACTACGAGAGGTTGGGTGGTGGAGCCAATGTTGTTGCTCACGGCTA
CACCAAGGGTGATGGTCTTGGTGCTGAGATTATTGGAACCTTTGTTCTTG
TTTACACTGTCTTCTCTGCCACTGATGCGAAGAGAAACGCCAGAGACTCT
CATGTCCCTATTTTGGCCCCCCTCCCCATTGGATTTGCTGTTTTCTTGGT
CCACCTGGCCACCATCCCCATCACAGGAACTGGCATCAACCCAGCTAGGA
GTCTTGGAGCTGCCATCATCTT
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