CK937343

Overview
NameCK937343
Unique NameCK937343
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.613e-28
Identity = 79/199 (39.70%), Postives = 114/199 (57.29%), Query Frame = 2
Query:  227 SFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHG-YTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 820
            +F++A  AEF+A  +F+ ++V + +    S      V +  I+  FG  I  +V C   ISGGHINPAVT  ++  RK+S+ ++VFY+  QCLGA+ GAG++           +GG      HG  T G GL  E+I TF LV+T+F++ D+KR    + V     L IGF+V + HL  I  TG  +NPARS G A+I
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPP---SVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVI 223          
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.412e-28
Identity = 79/199 (39.70%), Postives = 114/199 (57.29%), Query Frame = 2
Query:  227 SFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHG-YTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 820
            +F++A  AEF+A  +F+ ++V + +    S      V +  I+  FG  I  +V C   ISGGHINPAVT  ++  RK+S+ ++VFY+  QCLGA+ GAG++           +GG      HG  T G GL  E+I TF LV+T+F++ D+KR    + V     L IGF+V + HL  I  TG  +NPARS G A+I
Sbjct:   36 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPP---NVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVI 226          
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 7.602e-28
Identity = 78/199 (39.20%), Postives = 116/199 (58.29%), Query Frame = 2
Query:  227 SFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHG-YTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 820
            +F++A  AEF+A  +F+ +++ + +    +  K   V +  I+  FG  I  +V C   ISGGHINPAVT  ++  RK+S+ ++VFY+  QCLGA+ GAG++           +GG    + HG  T G GL  E+I TF LV+T+F++ D+KR    + V     L IGF+V + HL  I  TG  +NPARS G A+I
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTE-KPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPP---SVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVI 223          
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.928e-28
Identity = 80/200 (40.00%), Postives = 115/200 (57.50%), Query Frame = 2
Query:  227 SFYRAGIAEFMATFLFLYITV-LTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHG-YTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 820
            +F++A  AEF+A  +F+ +++  T+    K N     V +  I+  FG  I  +V C   ISGGHINPAVT  ++  RK+S+ ++VFY+  QCLGA+ GAG++           +GG      HG  T G GL  E+I TF LV+T+F++ D+KR    + V     L IGF+V + HL  I  TG  +NPARS G A+I
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSLGSTINWGGKENPL--PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPP---SVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVI 223          
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 6.435e-27
Identity = 82/204 (40.20%), Postives = 114/204 (55.88%), Query Frame = 2
Query:  212 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKS-NTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 820
            EL+S SF+RA +AEF+ + L+      T++G+  S        G+ G A AFG     LV     +SGGHINPA+T   LLA +LSL RA+ Y++ Q LGA+ GAGV+ G   +     LG  A   + G   G G   E++ T   +  VF++ D + + R    P  A LP+GF++ L HL  IP TG G+NPARS   A+I
Sbjct:    3 ELRSSSFWRAILAEFLGSLLY------TLLGLGASLRWAPGPHGVLGSALAFGLAQATLVQALGHVSGGHINPAITLAFLLASQLSLPRALGYLLAQLLGALAGAGVLYGVTPAAVRGTLGLSALHPSVG--PGQGTVVELLLTAQFILCVFASFDDRHDGR----PGSAALPVGFSLALGHLFGIPFTGAGMNPARSFAPAVI 194          
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.435e-27
Identity = 77/204 (37.75%), Postives = 113/204 (55.39%), Query Frame = 2
Query:  212 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAII 820
            E+ S +F +A  AEF+AT +F++  + + +         +   I  IA AFG  I  L      +SGGHINPA+T  LL+  ++SL RAVFY+V Q +GA+ GAG++ G         L    N + +  T G  +  E+I TF L   +FS+TD++R +     P+ +P L IG +V L HL  I  TG  +NPARS G A++
Sbjct:    4 EVCSLAFLKAVFAEFLATLIFVFFGLASAL-----KWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPGNARGNL--AVNSLNNNTTPGQAVVVEMILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVV 195          
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 119.013 bits (297), Expect = 3.194e-26
Identity = 75/199 (37.69%), Postives = 114/199 (57.29%), Query Frame = 2
Query:  227 SFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHG-YTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 820
            +F++A  AEF+A  +F+ +++ + +    +  K   V +  I+  FG  I  +V C   ISGGHINPAVT  ++  R++S+ ++VFY+  QCLGA+ GAG++           +GG      HG  + G GL  E+I TF LV+T+F++ D+KR    + V     L IG +V + HL  I  TG  +NPARS G A+I
Sbjct:   33 TFWKAVTAEFLAMLIFVLLSLGSTINWGGAE-KPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGILYLVTPP---SVVGGLGVTTVHGNLSAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGISVAIGHLFAINYTGASMNPARSFGPAVI 223          
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.448e-26
Identity = 75/204 (36.76%), Postives = 113/204 (55.39%), Query Frame = 2
Query:  212 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAII 820
            E+ S +F +A  AEF+AT +F++  + + +         +   +  I+ AFG  I  +      +SGGH+NPA+T  LL+  ++SL RAVFY+V Q +GA+ GA ++ G         L    N + +  T G  + AE+I TF L   VFS+TD++R +     P+ +P L IG +V L HL  I  TG  +NPARS G A+I
Sbjct:    4 EVCSAAFLKAVFAEFLATLIFVFFGLGSAL-----KWPSAMPSVLQISLAFGLAIGTMAQALGPVSGGHMNPAITLALLVGNQISLLRAVFYLVAQLVGAIAGAAILYGLAPYNARSNL--AVNALNNNTTAGQAVVAEMILTFQLALCVFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVI 195          
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4)

HSP 1 Score: 117.087 bits (292), Expect = 1.214e-25
Identity = 72/199 (36.18%), Postives = 109/199 (54.77%), Query Frame = 2
Query:  227 SFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGG-GANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 820
            + +R  +AEF+ TF  + I + +  G +  +   +      IA+ FG ++  L      +SG HINPAVT GL++   +S+ +  FY+V QC+GA+ GA V+K    S   E +GG G   +A G + G G+  E + TF+LV+ V    D +R    + V   APL IG ++   HLA I  TG  +NPARS G A++
Sbjct:   21 NIWRMLVAEFLGTFFLVAIGIGSTTGWTDYSPTLTQ-----IAFTFGLVVATLAQAFGHVSGCHINPAVTIGLIVTADVSILKGAFYIVSQCIGAIAGAAVIKAATPS---EVVGGLGVTGIAPGLSTGQGVLIEALITFMLVFVVHGVCDNRR----TDVKGSAPLAIGLSITAGHLAAIKYTGASMNPARSFGPAVV 207          
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.214e-25
Identity = 73/204 (35.78%), Postives = 113/204 (55.39%), Query Frame = 2
Query:  212 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAII 820
            E+ S +F++A  AEF+AT +F++  + + +         +   I  I+ AFG  I  L      +SGGHINPA+T  LL+  ++SL RA+FY+  Q +GA+ GAG++           L    N +++  T G  +  E+I TF L   +FS+TD++R +     P+ +P L IG +V L HL  I  TG  +NPARS G A++
Sbjct:    4 EVCSVAFFKAVFAEFLATLIFVFFGLGSAL-----KWPSALPTILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAIFYVAAQLVGAIAGAGILYWLAPGNARGNL--AVNALSNNTTPGKAVVVELILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVV 195          
The following BLAST results are available for this feature:
BLAST of CK937343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 191
Match NameE-valueIdentityDescription
AQP4_RAT2.613e-2839.70Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1[more]
AQP4_NOTAL3.412e-2839.70Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]
AQP4_HUMAN7.602e-2839.20Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2[more]
AQP4_DIPME9.928e-2840.00Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=... [more]
MIP_CHICK6.435e-2740.20Lens fiber major intrinsic protein OS=Gallus gallu... [more]
AQP5_PIG6.435e-2737.75Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
AQP4_BOVIN3.194e-2637.69Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
AQP5_SHEEP5.448e-2636.76Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]
AQP_ANOGA1.214e-2536.18Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP0088... [more]
AQP5_MOUSE1.214e-2535.78Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004511_B06 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIF_B06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937343 ID=CK937343; Name=CK937343; organism=Citrus sinensis; type=EST; length=822bp
GGGGGCTACGCTACATACACAACACAAACACAGCATCTTCTTTGAGAGAA
TAAGGGAGCGAGAGAGAGGTTCATCATCGTCAATGGAGGGCAAAGAAGAG
GATGTTAAGCTAGGAGCTAACAAGTTCTCAGAGAGGCAACCCATTGGGAC
ATCAGCTCAATCAGACAAAGACTACAAGGAGCCACCACCAGCACCTTTGT
TTGAGCCTGGTGAGCTCAAGTCATGGTCTTTTTACAGAGCTGGTATTGCA
GAGTTCATGGCTACCTTCTTGTTCCTCTACATCACTGTCTTGACTGTCAT
GGGTGTCTCTAAGTCTAACACCAAGTGCTCCACTGTCGGTATCCAAGGAA
TTGCTTGGGCCTTTGGTGGCATGATCTTTGCGCTTGTTTACTGCACTGCT
GGTATCTCAGGAGGACACATCAACCCAGCAGTGACCTTCGGTCTGCTGCT
AGCGAGGAAGCTTTCCCTGACAAGGGCTGTCTTCTACATGGTCATGCAGT
GCCTTGGTGCTGTCTGTGGTGCTGGTGTTGTCAAGGGATTCGAAGGTTCA
AAGAACTACGAGAGGTTGGGTGGTGGAGCCAATGTTGTTGCTCACGGCTA
CACCAAGGGTGATGGTCTTGGTGCTGAGATTATTGGAACCTTTGTTCTTG
TTTACACTGTCTTCTCTGCCACTGATGCGAAGAGAAACGCCAGAGACTCT
CATGTCCCTATTTTGGCCCCCCTCCCCATTGGATTTGCTGTTTTCTTGGT
CCACCTGGCCACCATCCCCATCACAGGAACTGGCATCAACCCAGCTAGGA
GTCTTGGAGCTGCCATCATCTT
back to top