CK937343

Overview
NameCK937343
Unique NameCK937343
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: AQP2_BOVIN (Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 3.305e-23
Identity = 77/203 (37.93%), Postives = 106/203 (52.22%), Query Frame = 2
Query:  212 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 820
            EL+S +F RA +AEF+AT LF++  + + +     N   +   +  IA AFG  I  LV     +SG HINPAVT   L+   +S  RAVFY+  Q LGAV GA ++   E +    R     N + +  T G  +  E+  T  LV  +F++TD +R            L IGF+V L HL  I  TG  +NPARSL  AI+
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSAL-----NWPQALPSVLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALL--HEITPPAIRGDLAVNALNNNSTAGQAVTVELFLTLQLVLCIFASTDERRGDNVG----TPALSIGFSVALGHLLGIHYTGCSMNPARSLAPAIV 194          
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.317e-23
Identity = 75/203 (36.95%), Postives = 104/203 (51.23%), Query Frame = 2
Query:  212 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 820
            EL+S SF+RA  AEF AT  +++      +G S        + +  +A AFG  +  LV     ISG H+NPAVTF  L+  ++SL RA+ YM  Q LGAV GA V+  +  +    R     N +  G + G     EI  T   V  +F+  D +RN R   V     L +GF++ L HL  +  TG G+NPARS   AI+
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAP-GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMAAQLLGAVAGAAVL--YSVTPAAVRGNLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL 194          
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEPK (Aquaporin Z OS=Pseudomonas putida (strain KT2440) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.317e-23
Identity = 61/168 (36.31%), Postives = 94/168 (55.95%), Query Frame = 2
Query:  335 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVV-------KGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAI 817
            +G+ G+A+AFG  +  + +    ISG H+NPAV+FGL++  +      + Y++ Q +GA+  AGV+        GFE S       G A+    GYT G G  +E++ T + +  +  ATDA+  A        AP+ IG A+ L+HL +IP+T T +NPARS G A+
Sbjct:   35 IGVLGVAFAFGLTVLTMAFAIGHISGCHLNPAVSFGLVVGGRFPAKELLPYVIAQVIGAILAAGVIYLIASGKAGFELSAGLAS-NGYADHSPGGYTLGAGFVSEVVMTAMFLVVIMGATDARAPAG------FAPIAIGLALTLIHLISIPVTNTSVNPARSTGPAL 195          
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.363e-23
Identity = 75/203 (36.95%), Postives = 105/203 (51.72%), Query Frame = 2
Query:  212 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 820
            EL+S SF+RA  AEF AT  +++      +G S        + +  +A AFG  +  LV     ISG H+NPAVTF  L+  ++SL RA+ Y+V Q LGAV GA V+  +  +    R     N +  G + G     EI  T   V  +F+  D +RN R   V     L +GF++ L HL  +  TG G+NPARS   AI+
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAP-GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVL--YSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL 194          
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 9.616e-23
Identity = 75/203 (36.95%), Postives = 105/203 (51.72%), Query Frame = 2
Query:  212 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 820
            EL+S SF+RA  AEF A+  +++      +G S        + +  +A AFG  +  LV     ISG H+NPAVTF  L+  ++SL RA+ YMV Q LGAV GA V+  +  +    R     N +  G + G     EI  T   V  +F+  D +RN R   V     L +GF++ L HL  +  TG G+NPARS   AI+
Sbjct:    3 ELRSASFWRAICAEFFASLFYVFFG----LGASLRWAP-GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVL--YSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL 194          
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.256e-22
Identity = 71/211 (33.65%), Postives = 112/211 (53.08%), Query Frame = 2
Query:  209 GELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKG----DGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 820
            G+  S +  +A ++EF+AT LF++  V + +  +K  S+      G+  +A A    +F  V   A ISGGH+NPAVT GL +   +++    FY + QCLG++    ++           +  G +V  HG   G    +G+  EI+ TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA  P +G  +NPARS G A++
Sbjct:   10 GDSFSVASLKAYLSEFIATLLFVFAGVGSALAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITVITGFFYWIAQCLGSIVACLLL---------VFVTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVV 207          
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.142e-22
Identity = 69/197 (35.03%), Postives = 104/197 (52.79%), Query Frame = 2
Query:  227 SFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAI 817
            + +R   AE + T L + I   +  GV  S        +  IA  FG +I  +V C   +SG HINPAVT GLL+   +S+ +A+FY+++QC+GA+ G+ ++K    ++    L      +A G T   G   E   TFVL+  V S  D +R     ++   AP+ +G A+   HLA I  TG+ +NPARS G A+
Sbjct:   24 TIWRCLAAELIGTLLLVLIGTGSCTGVQISEGDV----VVRIALTFGFIIATMVQCIGHVSGCHINPAVTCGLLVTGHISILKAIFYIIVQCVGAIAGSAILKVITPAEFRGTL--CMTSLAPGVTPPMGFLVEACITFVLILLVQSVCDDRR----KNLGNAAPVAVGLAITCCHLAAIKYTGSSMNPARSFGPAV 210          
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.798e-22
Identity = 73/203 (35.96%), Postives = 102/203 (50.25%), Query Frame = 2
Query:  212 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 820
            EL+S SF+RA  AEF AT  +++  +      S        + +  +A AFG  +  LV     ISG H+NPAVTF  L+  ++SL RA  Y+  Q LGAV GA V+  +  +    R     N +  G + G     EI  T   V  +F+  D +RN R   V     L +GF++ L HL  +  TG G+NPARS   AI+
Sbjct:    1 ELRSASFWRAIFAEFFATLFYVFFGL-----GSSLRWAPGPLHVLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVL--YSVTPPAVRGNLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL 192          
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: MIP_MOUSE (Lens fiber major intrinsic protein OS=Mus musculus GN=Mip PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 3.654e-22
Identity = 74/203 (36.45%), Postives = 103/203 (50.74%), Query Frame = 2
Query:  212 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 820
            EL+S SF+RA  AEF AT  +++      +G S        + +  +A AFG  +  LV     ISG H+NPAVTF  L+  ++SL RA  Y+  Q LGAV GA V+  +  +    R     N +  G + G     EI  T   V  +F+  D +RN R   V     L +GF++ L HL  +  TG G+NPARS   AI+
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAP-GPLHVLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVL--YSVTPPAVRGNLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL 194          
BLAST of CK937343 vs. ExPASy Swiss-Prot
Match: AQP2_MOUSE (Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 3.654e-22
Identity = 75/203 (36.95%), Postives = 106/203 (52.22%), Query Frame = 2
Query:  212 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 820
            EL+S +F RA +AEF+AT LF++  + + +  + S        +  IA AFG  I  LV     +SG HINPAVT   L+   +S  RA FY+  Q LGAV GA ++   E +    R     N + +  T G  +  E+  T  LV  +F++TD +R+           L IGF+V L HL  I  TG  +NPARSL  A++
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSALQWASSPPS-----VLQIAVAFGLGIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAIL--HEITPVEIRGDLAVNALHNNATAGQAVTVELFLTMQLVLCIFASTDERRSDNLGS----PALSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVV 194          
The following BLAST results are available for this feature:
BLAST of CK937343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 191
Match NameE-valueIdentityDescription
AQP2_BOVIN3.305e-2337.93Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2[more]
MIP_RABIT4.317e-2336.95Lens fiber major intrinsic protein OS=Oryctolagus ... [more]
AQPZ_PSEPK4.317e-2336.31Aquaporin Z OS=Pseudomonas putida (strain KT2440) ... [more]
MIP_SHEEP7.363e-2336.95Lens fiber major intrinsic protein OS=Ovis aries G... [more]
MIP_BOVIN9.616e-2336.95Lens fiber major intrinsic protein OS=Bos taurus G... [more]
TIP22_ARATH1.256e-2233.65Probable aquaporin TIP2-2 OS=Arabidopsis thaliana ... [more]
AQP_CICVR2.142e-2235.03Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 ... [more]
MIP_RAT2.798e-2235.96Lens fiber major intrinsic protein (Fragment) OS=R... [more]
MIP_MOUSE3.654e-2236.45Lens fiber major intrinsic protein OS=Mus musculus... [more]
AQP2_MOUSE3.654e-2236.95Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCGF1004511_B06 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIF_B06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937343 ID=CK937343; Name=CK937343; organism=Citrus sinensis; type=EST; length=822bp
GGGGGCTACGCTACATACACAACACAAACACAGCATCTTCTTTGAGAGAA
TAAGGGAGCGAGAGAGAGGTTCATCATCGTCAATGGAGGGCAAAGAAGAG
GATGTTAAGCTAGGAGCTAACAAGTTCTCAGAGAGGCAACCCATTGGGAC
ATCAGCTCAATCAGACAAAGACTACAAGGAGCCACCACCAGCACCTTTGT
TTGAGCCTGGTGAGCTCAAGTCATGGTCTTTTTACAGAGCTGGTATTGCA
GAGTTCATGGCTACCTTCTTGTTCCTCTACATCACTGTCTTGACTGTCAT
GGGTGTCTCTAAGTCTAACACCAAGTGCTCCACTGTCGGTATCCAAGGAA
TTGCTTGGGCCTTTGGTGGCATGATCTTTGCGCTTGTTTACTGCACTGCT
GGTATCTCAGGAGGACACATCAACCCAGCAGTGACCTTCGGTCTGCTGCT
AGCGAGGAAGCTTTCCCTGACAAGGGCTGTCTTCTACATGGTCATGCAGT
GCCTTGGTGCTGTCTGTGGTGCTGGTGTTGTCAAGGGATTCGAAGGTTCA
AAGAACTACGAGAGGTTGGGTGGTGGAGCCAATGTTGTTGCTCACGGCTA
CACCAAGGGTGATGGTCTTGGTGCTGAGATTATTGGAACCTTTGTTCTTG
TTTACACTGTCTTCTCTGCCACTGATGCGAAGAGAAACGCCAGAGACTCT
CATGTCCCTATTTTGGCCCCCCTCCCCATTGGATTTGCTGTTTTCTTGGT
CCACCTGGCCACCATCCCCATCACAGGAACTGGCATCAACCCAGCTAGGA
GTCTTGGAGCTGCCATCATCTT
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