CK937319

Overview
NameCK937319
Unique NameCK937319
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_CHLTB (Inorganic pyrophosphatase OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=ppa PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.197e-14
Identity = 48/132 (36.36%), Postives = 69/132 (52.27%), Query Frame = 1
Query:  352 VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCED------------------NDPLDVLIIMQEPVLPG-CFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYK 690
            VK+ELDK++G++ VDR    S   P  YG +P+T C D                   DPLD+ ++ ++ +  G   L+A+ IG + ++D  E DDKIIAV  DD  Y +  DI E P   L  I+ +F  YK
Sbjct:   37 VKFELDKETGILKVDRPQKFSNFCPCLYGLLPKTYCGDLSGEYSGQQSNRENIKGDGDPLDICVLTEKNITQGNILLQARPIGGIRILDSEEADDKIIAVLEDDLVYGNIEDISECPGTVLDMIQHYFLTYK 168          
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_CHLTA (Inorganic pyrophosphatase OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=ppa PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.197e-14
Identity = 48/132 (36.36%), Postives = 69/132 (52.27%), Query Frame = 1
Query:  352 VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCED------------------NDPLDVLIIMQEPVLPG-CFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYK 690
            VK+ELDK++G++ VDR    S   P  YG +P+T C D                   DPLD+ ++ ++ +  G   L+A+ IG + ++D  E DDKIIAV  DD  Y +  DI E P   L  I+ +F  YK
Sbjct:   37 VKFELDKETGILKVDRPQKFSNFCPCLYGLLPKTYCGDLSGEYSGQQSNRENIKGDGDPLDICVLTEKNITQGNILLQARPIGGIRILDSEEADDKIIAVLEDDLVYGNIEDISECPGTVLDMIQHYFLTYK 168          
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_CHLT2 (Inorganic pyrophosphatase OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=ppa PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.197e-14
Identity = 48/132 (36.36%), Postives = 69/132 (52.27%), Query Frame = 1
Query:  352 VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCED------------------NDPLDVLIIMQEPVLPG-CFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYK 690
            VK+ELDK++G++ VDR    S   P  YG +P+T C D                   DPLD+ ++ ++ +  G   L+A+ IG + ++D  E DDKIIAV  DD  Y +  DI E P   L  I+ +F  YK
Sbjct:   37 VKFELDKETGILKVDRPQKFSNFCPCLYGLLPKTYCGDLSGEYSGQQSNRENIKGDGDPLDICVLTEKNITQGNILLQARPIGGIRILDSEEADDKIIAVLEDDLVYGNIEDISECPGTVLDMIQHYFLTYK 168          
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_BOVIN (Inorganic pyrophosphatase OS=Bos taurus GN=PPA1 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12
Identity = 45/123 (36.59%), Postives = 61/123 (49.59%), Query Frame = 1
Query:  367 DKKSGLIMVDRVLYSSVVYPHNYGFIPRT------------LCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDI---KELPPHRLAEIRRFFEDYK 690
            D K G +     L+    Y  NYG IP+T             C DNDP+DV  I  +    G  +R K +G++ MID+GE D K+IA+  +DP+  +YNDI   K L P  L     +F  YK
Sbjct:   72 DVKKGKLRYVANLFPYKGYIWNYGAIPQTWEDPGHNDKHTGCCGDNDPIDVCEIGSKVCARGEIIRVKVLGILAMIDEGETDWKVIAINVEDPDAANYNDINDVKRLKPGYLEATVDWFRRYK 194          
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_MACFA (Inorganic pyrophosphatase OS=Macaca fascicularis GN=PPA1 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.204e-11
Identity = 45/123 (36.59%), Postives = 60/123 (48.78%), Query Frame = 1
Query:  367 DKKSGLIMVDRVLYSSVVYPHNYGFIPRT------------LCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDI---KELPPHRLAEIRRFFEDYK 690
            D K G +     L+    Y  NYG IP+T             C DNDP+DV  I  +    G  +  K +G++ MID+GE D K+IA+  DDP+  +YNDI   K L P  L     +F  YK
Sbjct:   72 DVKKGKLRYVANLFPYKGYIWNYGAIPQTWEDPGHNDKHTGCCGDNDPIDVCEIGSKVCARGEIIGVKVLGILAMIDEGETDWKVIAINVDDPDAANYNDINDVKRLKPGYLEATVDWFRRYK 194          
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_HUMAN (Inorganic pyrophosphatase OS=Homo sapiens GN=PPA1 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.204e-11
Identity = 45/123 (36.59%), Postives = 60/123 (48.78%), Query Frame = 1
Query:  367 DKKSGLIMVDRVLYSSVVYPHNYGFIPRT------------LCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDI---KELPPHRLAEIRRFFEDYK 690
            D K G +     L+    Y  NYG IP+T             C DNDP+DV  I  +    G  +  K +G++ MID+GE D K+IA+  DDP+  +YNDI   K L P  L     +F  YK
Sbjct:   72 DVKKGKLRYVANLFPYKGYIWNYGAIPQTWEDPGHNDKHTGCCGDNDPIDVCEIGSKVCARGEIIGVKVLGILAMIDEGETDWKVIAINVDDPDAANYNDINDVKRLKPGYLEATVDWFRRYK 194          
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_MOUSE (Inorganic pyrophosphatase OS=Mus musculus GN=Ppa1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.879e-11
Identity = 43/123 (34.96%), Postives = 61/123 (49.59%), Query Frame = 1
Query:  367 DKKSGLIMVDRVLYSSVVYPHNYGFIPRT------------LCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPE---YRHYNDIKELPPHRLAEIRRFFEDYK 690
            D K G +     L+    Y  NYG IP+T             C DNDP+DV  I  +    G  +R K +G++ MID+GE D K+IA+  DDP+   Y+  +D++ L P  L     +F  YK
Sbjct:   72 DVKKGKLRYVANLFPYKGYIWNYGAIPQTWEDPGHSDKHTGCCGDNDPIDVCEIGSKVCARGEIIRVKVLGILAMIDEGETDWKVIAINVDDPDAANYKDISDVERLKPGYLEATVDWFRRYK 194          
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_PONAB (Inorganic pyrophosphatase OS=Pongo abelii GN=PPA1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11
Identity = 43/128 (33.59%), Postives = 64/128 (50.00%), Query Frame = 1
Query:  352 VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRT------------LCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDI---KELPPHRLAEIRRFFEDYK 690
            +K ++ K+    + +   Y   ++  NYG IP+T             C DNDP+DV  I  +    G  +  K +G++ MID+GE D K+IA+  DDP+  +YNDI   K L P  L     +F  YK
Sbjct:   69 IKQDVKKRKLRYVANLFPYKGYIW--NYGAIPQTWEDPGHNDKHTGCCGDNDPIDVCEIGSKVCARGEIIGVKVLGILAMIDEGETDWKVIAINMDDPDAANYNDINDVKRLKPGYLEATVDWFRRYK 194          
The following BLAST results are available for this feature:
BLAST of CK937319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
IPYR_CHLTB6.197e-1436.36Inorganic pyrophosphatase OS=Chlamydia trachomatis... [more]
IPYR_CHLTA6.197e-1436.36Inorganic pyrophosphatase OS=Chlamydia trachomatis... [more]
IPYR_CHLT26.197e-1436.36Inorganic pyrophosphatase OS=Chlamydia trachomatis... [more]
IPYR_BOVIN9.894e-1236.59Inorganic pyrophosphatase OS=Bos taurus GN=PPA1 PE... [more]
IPYR_MACFA2.204e-1136.59Inorganic pyrophosphatase OS=Macaca fascicularis G... [more]
IPYR_HUMAN2.204e-1136.59Inorganic pyrophosphatase OS=Homo sapiens GN=PPA1 ... [more]
IPYR_MOUSE2.879e-1134.96Inorganic pyrophosphatase OS=Mus musculus GN=Ppa1 ... [more]
IPYR_PONAB8.376e-1133.59Inorganic pyrophosphatase OS=Pongo abelii GN=PPA1 ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004511_D03 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIF_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937319 ID=CK937319; Name=CK937319; organism=Citrus sinensis; type=EST; length=697bp
TCTTGCTTTCCTCTACTTAAGCGCCCGTAGAGGAACTTAACTTTAATATC
TTCGCCATTACGCCTCTCTCTTTTCGAGATCGGGGCGTTTCTTTGTGGTC
TTGAAGCTTCGTTCTCGTTAGGCCCTGTTTGGCTTTCAGTACTTGAACCG
TTACGGTTATGATGGCTCCACCAATTGAGACTTCAAGCAAAACTCCTGTC
TCCCAACCTCCAGCACATCCTCCGCTTAATGAAAGGATACTTTCTTCAAT
GAGCAGGAGGTCTGTTGCTGCACATCCTTGGCATGATCTTGAGATTGGAC
CTGGAGCTCCAAAGATTTTCAATTGCGTGATTGAAATTGGGGGGGAGCAA
GGTGAAATATGAACTTGACAAAAAATCTGGACTGATCATGGTTGATCGTG
TTCTTTACTCTTCAGTTGTGTACCCCCATAACTATGGTTTCATACCTCGT
ACTCTTTGCGAAGACAATGATCCCCTTGATGTCCTGATCATCATGCAGGA
GCCAGTTCTTCCAGGCTGCTTTCTTCGGGCTAAAGCCATCGGACTCATGC
CTATGATTGATCAGGGTGAGAAAGATGATAAGATCATTGCTGTCTGTGCT
GATGATCCCGAGTACCGACACTACAATGACATTAAGGAGCTTCCACCACA
TCGTTTGGCTGAGATCCGCCGCTTCTTTGAAGACTACAAGNAAAATG
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