CK937319

Overview
NameCK937319
Unique NameCK937319
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_HALSA (Inorganic pyrophosphatase OS=Halobacterium salinarium GN=ppa PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 4.038e-28
Identity = 55/118 (46.61%), Postives = 79/118 (66.95%), Query Frame = 1
Query:  337 LGGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYK 690
            L G + KYE DK    +++DRVL+S+V YP +YGFIP++  +D DP DVL+++++   PGC + A+ + LM M D GE+DDK+IAV  +DP Y    D+ +L   + AEI  FFE YK
Sbjct:   25 LKGERNKYEYDKDIPGVVLDRVLHSNVHYPSDYGFIPQSYYDDGDPFDVLVLVEDQTFPGCVIEARPVALMEMDDDGEQDDKVIAVPEEDPRYDDVEDVDDLTDQQKAEIAEFFETYK 142          

HSP 2 Score: 25.409 bits (54), Expect = 4.038e-28
Identity = 10/20 (50.00%), Postives = 12/20 (60.00%), Query Frame = 3
Query:  270 AHPWHDLEIGPGAPKIFNCV 329
            A+ W DLE GP AP +   V
Sbjct:    2 ANLWEDLETGPDAPDVIYAV 21          
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_PYRKO (Inorganic pyrophosphatase OS=Pyrococcus kodakaraensis GN=ppa PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.421e-28
Identity = 58/116 (50.00%), Postives = 82/116 (70.69%), Query Frame = 1
Query:  343 GSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYK 690
            GS+ KYELDKK+GL+ +DRVLYS   YP +YG IP+T  +D DP D+++IM+EPV P   + A+ IG+M M D G+KD K++AV  +DP ++ + DI ++P   L EI  FF+ YK
Sbjct:   26 GSRNKYELDKKTGLLKLDRVLYSPFFYPVDYGIIPQTWYDDGDPFDIMVIMREPVYPLTIVEARPIGIMKMEDSGDKDWKVLAVPVEDPYFKDWKDIDDVPKAFLDEIAHFFQRYK 141          
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_MYCPE (Inorganic pyrophosphatase OS=Mycoplasma penetrans GN=ppa PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.774e-28
Identity = 60/115 (52.17%), Postives = 75/115 (65.22%), Query Frame = 1
Query:  346 SKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYK 690
            S VKYE D+K+  I VDR+L+ + VYPHNYGFI   L  D D LD L+I  +  LPG  + AK IG M MID GE D K+I+V   DP Y+H N++ +L  H L EI+ FFE YK
Sbjct:   13 SNVKYEYDRKTNQISVDRILFGTEVYPHNYGFIKEALDWDGDELDALVIADQSFLPGIIVPAKIIGAMEMIDDGETDTKLISVIDCDPRYKHINNLSDLGEHTLKEIQNFFETYK 127          
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_PICTO (Inorganic pyrophosphatase OS=Picrophilus torridus GN=ppa PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.541e-28
Identity = 56/116 (48.28%), Postives = 75/116 (64.66%), Query Frame = 1
Query:  343 GSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYK 690
            G + KYE+ K+   I +DR++YSS VYP  YG IP+T   D DP+D ++ M +   PG  LRAK +G+M M+D G+ D+KII VC DDP Y   N+ +E+P H L E   FFE YK
Sbjct:   30 GERNKYEIAKEFPGIKLDRIIYSSYVYPLEYGLIPQTYYSDGDPIDAMVFMSQSTYPGVILRAKPVGMMNMVDSGDVDNKIICVCLDDPVYSKINNYREIPEHVLKETENFFETYK 145          
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_BACST (Inorganic pyrophosphatase OS=Bacillus stearothermophilus GN=ppa PE=1 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 7.541e-28
Identity = 55/116 (47.41%), Postives = 75/116 (64.66%), Query Frame = 1
Query:  343 GSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYK 690
            GS+ KYE DK+ G+  +DRVLYS + YP  YG++  TL  D DPLD+L+I   P  PGC +  + IG + M+D GE+D K+I V  +DP +     I++LP H+L EI  FFE YK
Sbjct:   17 GSQNKYEFDKERGIFKLDRVLYSPMFYPAEYGYLQNTLALDGDPLDILVITTNPTFPGCVIDTRVIGYLNMVDSGEEDAKLIGVPVEDPRFDEVRSIEDLPQHKLKEIAHFFERYK 132          
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_BACP3 (Inorganic pyrophosphatase OS=Bacillus PS3 GN=ppa PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.286e-27
Identity = 55/116 (47.41%), Postives = 75/116 (64.66%), Query Frame = 1
Query:  343 GSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYK 690
            GS+ KYE DK+ G+  +DRVLYS + YP  YG++  TL  D DPLD+L+I   P  PGC +  + IG + M+D GE+D K+I V  +DP +     I++LP H+L EI  FFE YK
Sbjct:   17 GSQNKYEFDKERGIFKLDRVLYSPMFYPAEYGYLQNTLALDGDPLDILVITTNPPFPGCVIDTRVIGYLNMVDSGEEDAKLIGVPVEDPRFDEVRSIEDLPQHKLKEIAHFFERYK 132          
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_UREPA (Inorganic pyrophosphatase OS=Ureaplasma parvum GN=ppa PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.680e-27
Identity = 57/115 (49.57%), Postives = 78/115 (67.83%), Query Frame = 1
Query:  346 SKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYK 690
            S +KYE D+ +  IMVDR+L+ S+VYPHNYGF+   L  D D LDVL+   +   PG  + A+ +G M MID GE D K++AV   DP Y+H N+ K++P H LAE++ FFE+YK
Sbjct:   13 SNIKYEYDRATKEIMVDRILHGSMVYPHNYGFLKEALDYDGDELDVLVFADQAFQPGIKVPARVLGAMKMIDGGETDTKLLAVIDVDPRYKHINNFKDIPLHWLAEVQDFFENYK 127          
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_AQUAE (Inorganic pyrophosphatase OS=Aquifex aeolicus GN=ppa PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.089e-26
Identity = 57/118 (48.31%), Postives = 81/118 (68.64%), Query Frame = 1
Query:  343 GSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYK 690
            GS VKYELDK +G+I VDR L++++ YP NYGF+P+TL +D DP+DVL+I +EPV+PG  +R + IG++ M D+   D K+IAV  +  DP Y +   +  LP     +I+ FFE YK
Sbjct:   25 GSAVKYELDKDTGVIFVDRFLFTAMYYPFNYGFVPQTLADDGDPVDVLVISREPVVPGAVMRCRPIGMLEMRDEAGIDTKVIAVPHEKLDPSYSNIKTVDNLPEIVREKIKHFFEHYK 142          
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_BRUSU (Inorganic pyrophosphatase OS=Brucella suis GN=ppa PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.426e-26
Identity = 55/120 (45.83%), Postives = 78/120 (65.00%), Query Frame = 1
Query:  337 LGGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYK 690
            +GG  +KYE+DKK+G ++VDR LY+ + YP NYGF+P TL ED DP+DVL+    P++PGC +  + IG++ M D   KD+KIIAV +      Y   +D  ++P   L +I  FFE YK
Sbjct:   24 VGGQPIKYEMDKKAGALIVDRFLYTPMTYPGNYGFVPHTLSEDGDPIDVLVCNTRPLIPGCVINVRPIGVLVMEDNSGKDEKIIAVPSPHLTRRYEKIHDYTDMPEITLKQIAHFFEHYK 143          
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_BRUME (Inorganic pyrophosphatase OS=Brucella melitensis GN=ppa PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.426e-26
Identity = 55/120 (45.83%), Postives = 78/120 (65.00%), Query Frame = 1
Query:  337 LGGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYK 690
            +GG  +KYE+DKK+G ++VDR LY+ + YP NYGF+P TL ED DP+DVL+    P++PGC +  + IG++ M D   KD+KIIAV +      Y   +D  ++P   L +I  FFE YK
Sbjct:   24 VGGQPIKYEMDKKAGALIVDRFLYTPMTYPGNYGFVPHTLSEDGDPIDVLVCNTRPLIPGCVINVRPIGVLVMEDNSGKDEKIIAVPSPHLTRRYEKIHDYTDMPEITLKQIAHFFEHYK 143          
The following BLAST results are available for this feature:
BLAST of CK937319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
IPYR_HALSA4.038e-2846.61Inorganic pyrophosphatase OS=Halobacterium salinar... [more]
IPYR_PYRKO4.421e-2850.00Inorganic pyrophosphatase OS=Pyrococcus kodakaraen... [more]
IPYR_MYCPE5.774e-2852.17Inorganic pyrophosphatase OS=Mycoplasma penetrans ... [more]
IPYR_PICTO7.541e-2848.28Inorganic pyrophosphatase OS=Picrophilus torridus ... [more]
IPYR_BACST7.541e-2847.41Inorganic pyrophosphatase OS=Bacillus stearothermo... [more]
IPYR_BACP31.286e-2747.41Inorganic pyrophosphatase OS=Bacillus PS3 GN=ppa P... [more]
IPYR_UREPA1.680e-2749.57Inorganic pyrophosphatase OS=Ureaplasma parvum GN=... [more]
IPYR_AQUAE1.089e-2648.31Inorganic pyrophosphatase OS=Aquifex aeolicus GN=p... [more]
IPYR_BRUSU2.426e-2645.83Inorganic pyrophosphatase OS=Brucella suis GN=ppa ... [more]
IPYR_BRUME2.426e-2645.83Inorganic pyrophosphatase OS=Brucella melitensis G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004511_D03 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIF_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937319 ID=CK937319; Name=CK937319; organism=Citrus sinensis; type=EST; length=697bp
TCTTGCTTTCCTCTACTTAAGCGCCCGTAGAGGAACTTAACTTTAATATC
TTCGCCATTACGCCTCTCTCTTTTCGAGATCGGGGCGTTTCTTTGTGGTC
TTGAAGCTTCGTTCTCGTTAGGCCCTGTTTGGCTTTCAGTACTTGAACCG
TTACGGTTATGATGGCTCCACCAATTGAGACTTCAAGCAAAACTCCTGTC
TCCCAACCTCCAGCACATCCTCCGCTTAATGAAAGGATACTTTCTTCAAT
GAGCAGGAGGTCTGTTGCTGCACATCCTTGGCATGATCTTGAGATTGGAC
CTGGAGCTCCAAAGATTTTCAATTGCGTGATTGAAATTGGGGGGGAGCAA
GGTGAAATATGAACTTGACAAAAAATCTGGACTGATCATGGTTGATCGTG
TTCTTTACTCTTCAGTTGTGTACCCCCATAACTATGGTTTCATACCTCGT
ACTCTTTGCGAAGACAATGATCCCCTTGATGTCCTGATCATCATGCAGGA
GCCAGTTCTTCCAGGCTGCTTTCTTCGGGCTAAAGCCATCGGACTCATGC
CTATGATTGATCAGGGTGAGAAAGATGATAAGATCATTGCTGTCTGTGCT
GATGATCCCGAGTACCGACACTACAATGACATTAAGGAGCTTCCACCACA
TCGTTTGGCTGAGATCCGCCGCTTCTTTGAAGACTACAAGNAAAATG
back to top