CK937319

Overview
NameCK937319
Unique NameCK937319
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_LEIXX (Inorganic pyrophosphatase OS=Leifsonia xyli subsp. xyli GN=ppa PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.019e-24
Identity = 50/116 (43.10%), Postives = 78/116 (67.24%), Query Frame = 1
Query:  343 GSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYK 690
            GS+ KYE+D ++G + +DRVL+++ VYP +YGF   TL +D DPLDVL++++ PV PG  ++ + +G++ M D+   D KIIAV   DP ++H  D+ ++P +   EI  FF  YK
Sbjct:   13 GSRNKYEVDHETGRVYLDRVLFTAFVYPADYGFFENTLGDDGDPLDVLVLLEYPVFPGVGIKVRPVGVLKMSDEAGGDAKIIAVQHKDPRWQHIQDVNDIPEYTRKEIEHFFARYK 128          
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_PSEAO (Inorganic pyrophosphatase OS=Pseudanabaena sp. (strain PCC 6903) GN=ppa PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.738e-24
Identity = 57/118 (48.31%), Postives = 74/118 (62.71%), Query Frame = 1
Query:  343 GSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRT--LCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYK 690
            GSK KYE DK      +DRVLYSSV YP++YGF+P T  L +D DPLD ++IM  P  PG    A+ IG++ M+D G++D+K + V A DP Y +     +L  HRL EI  FF  YK
Sbjct:   24 GSKNKYEFDKDLNAFALDRVLYSSVQYPYDYGFVPITNNLADDGDPLDGMVIMVPPTFPGV-ATARPIGMLQMVDGGDRDEKFLCVPAKDPRYTYVKSANDLAGHRLDEIFEFFRSYK 140          
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_SULAC (Inorganic pyrophosphatase OS=Sulfolobus acidocaldarius GN=ppa PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.270e-24
Identity = 58/118 (49.15%), Postives = 76/118 (64.41%), Query Frame = 1
Query:  343 GSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYK 690
            GS +KYE D + G+I VDRVLY+S+ YP NYGFIP TL ED DPLDVL+I    + PG  +  + IG++ M D+  +D KI+AV  D  DP + +  DI +LP     +I  FFE YK
Sbjct:   22 GSNIKYEYDDEEGVIKVDRVLYTSMNYPFNYGFIPGTLEEDGDPLDVLVITNYQLYPGSVIEVRPIGILYMKDEEGEDAKIVAVPKDKTDPSFSNIKDINDLPQATKNKIVHFFEHYK 139          
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_BARBK (Inorganic pyrophosphatase OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=ppa PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.270e-24
Identity = 56/115 (48.70%), Postives = 76/115 (66.09%), Query Frame = 1
Query:  352 VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYK 690
            VKYE+DKKSG + VDR + +S+VYP NYGFIP TL ED+DP+DVL+    P++PGC +  + IG + M D G KD+KIIAV       +Y   +D  +L  + L +I  FF+ YK
Sbjct:   29 VKYEMDKKSGSLFVDRFISTSMVYPGNYGFIPHTLSEDSDPIDVLVCNTRPLIPGCVINVRPIGALIMEDDGGKDEKIIAVPTPKLTQQYIGIHDYTDLTENILKKIEHFFKHYK 143          
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_MYCTU (Inorganic pyrophosphatase OS=Mycobacterium tuberculosis GN=ppa PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.873e-24
Identity = 49/116 (42.24%), Postives = 75/116 (64.66%), Query Frame = 1
Query:  343 GSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYK 690
            G + KYE+D ++G + +DR LY+ + YP +YGFI  TL +D DPLD L+++ +PV PG  + A+ +G+  M+D+   DDK++ V A DP + H  DI ++P   L  I+ FF  YK
Sbjct:   12 GQRNKYEVDHETGRVRLDRYLYTPMAYPTDYGFIEDTLGDDGDPLDALVLLPQPVFPGVLVAARPVGMFRMVDEHGGDDKVLCVPAGDPRWDHVQDIGDVPAFELDAIKHFFVHYK 127          
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_MYCGE (Inorganic pyrophosphatase OS=Mycoplasma genitalium GN=ppa PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.873e-24
Identity = 53/115 (46.09%), Postives = 70/115 (60.87%), Query Frame = 1
Query:  346 SKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYK 690
            SK+KYE D+++G I VDR+L+ S  YP NYGFI  TL  D D LD  I   +P LP   +  + +G + MID GE D K++ V   DP Y+  N I +LP HR+ EI  F + YK
Sbjct:   16 SKIKYEYDRQTGQIRVDRILFGSESYPQNYGFIKNTLDWDGDELDCFIFADQPFLPATVVPTRIVGALEMIDDGEIDTKLLGVIDCDPRYKEINQISDLPKHRIEEILIFLKTYK 130          
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_MYCBO (Inorganic pyrophosphatase OS=Mycobacterium bovis GN=ppa PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.873e-24
Identity = 49/116 (42.24%), Postives = 75/116 (64.66%), Query Frame = 1
Query:  343 GSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYK 690
            G + KYE+D ++G + +DR LY+ + YP +YGFI  TL +D DPLD L+++ +PV PG  + A+ +G+  M+D+   DDK++ V A DP + H  DI ++P   L  I+ FF  YK
Sbjct:   12 GQRNKYEVDHETGRVRLDRYLYTPMAYPTDYGFIEDTLGDDGDPLDALVLLPQPVFPGVLVAARPVGMFRMVDEHGGDDKVLCVPAGDPRWDHVQDIGDVPAFELDAIKHFFVHYK 127          
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR2_PSESM (Inorganic pyrophosphatase 2 OS=Pseudomonas syringae pv. tomato GN=ppa2 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.058e-24
Identity = 57/127 (44.88%), Postives = 80/127 (62.99%), Query Frame = 1
Query:  316 FSIA*LKLGGSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYK 690
            F++  +    S +KYE+DK SG I VDR L + + YP NYGFIP TL +D DPLDVL+I   PV PG  +R++ +G+M M D+   D K+IAV  +     Y +  +  +LP   LA+I+ FFE+YK
Sbjct:   17 FTVIEIPANHSPIKYEVDKPSGQIFVDRFLSTPMFYPANYGFIPNTLSDDGDPLDVLVICPYPVSPGVVIRSRPVGVMYMTDEAGADAKVIAVPHEKLSSMYSNVKECSDLPALLLAQIQHFFENYK 143          
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_HELPY (Inorganic pyrophosphatase OS=Helicobacter pylori GN=ppa PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.628e-24
Identity = 53/117 (45.30%), Postives = 76/117 (64.96%), Query Frame = 1
Query:  346 SKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYK 690
            S +KYELDK+SG +MVDRVLY +  YP NYGF+P TL  D DP+D L++       G  ++A+ +G++ M D+   D+K+IA+  D  DP + +  DI +L  H L +I+ FFE YK
Sbjct:   25 SNIKYELDKESGALMVDRVLYGAQNYPANYGFVPNTLGSDGDPVDALVLSDVAFQAGSVVKARLVGVLNMEDESGMDEKLIALPIDKIDPTHSYVKDIDDLSKHTLDKIKHFFETYK 141          
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_HELPJ (Inorganic pyrophosphatase OS=Helicobacter pylori J99 GN=ppa PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.472e-23
Identity = 52/117 (44.44%), Postives = 76/117 (64.96%), Query Frame = 1
Query:  346 SKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYK 690
            S +KYELDK+SG +MVDRVLY +  YP NYGF+P TL  D DP+D L++       G  ++A+ +G++ M D+   D+K++A+  D  DP + +  DI +L  H L +I+ FFE YK
Sbjct:   25 SNIKYELDKESGALMVDRVLYGAQNYPANYGFVPNTLGSDGDPVDALVLSDVAFQAGSVVKARLVGVLNMEDESGMDEKLLALPIDKIDPTHSYVKDIDDLSKHTLDKIKHFFETYK 141          
The following BLAST results are available for this feature:
BLAST of CK937319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
IPYR_LEIXX1.019e-2443.10Inorganic pyrophosphatase OS=Leifsonia xyli subsp.... [more]
IPYR_PSEAO1.738e-2448.31Inorganic pyrophosphatase OS=Pseudanabaena sp. (st... [more]
IPYR_SULAC2.270e-2449.15Inorganic pyrophosphatase OS=Sulfolobus acidocalda... [more]
IPYR_BARBK2.270e-2448.70Inorganic pyrophosphatase OS=Bartonella bacillifor... [more]
IPYR_MYCTU3.873e-2442.24Inorganic pyrophosphatase OS=Mycobacterium tubercu... [more]
IPYR_MYCGE3.873e-2446.09Inorganic pyrophosphatase OS=Mycoplasma genitalium... [more]
IPYR_MYCBO3.873e-2442.24Inorganic pyrophosphatase OS=Mycobacterium bovis G... [more]
IPYR2_PSESM5.058e-2444.88Inorganic pyrophosphatase 2 OS=Pseudomonas syringa... [more]
IPYR_HELPY8.628e-2445.30Inorganic pyrophosphatase OS=Helicobacter pylori G... [more]
IPYR_HELPJ1.472e-2344.44Inorganic pyrophosphatase OS=Helicobacter pylori J... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004511_D03 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIF_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937319 ID=CK937319; Name=CK937319; organism=Citrus sinensis; type=EST; length=697bp
TCTTGCTTTCCTCTACTTAAGCGCCCGTAGAGGAACTTAACTTTAATATC
TTCGCCATTACGCCTCTCTCTTTTCGAGATCGGGGCGTTTCTTTGTGGTC
TTGAAGCTTCGTTCTCGTTAGGCCCTGTTTGGCTTTCAGTACTTGAACCG
TTACGGTTATGATGGCTCCACCAATTGAGACTTCAAGCAAAACTCCTGTC
TCCCAACCTCCAGCACATCCTCCGCTTAATGAAAGGATACTTTCTTCAAT
GAGCAGGAGGTCTGTTGCTGCACATCCTTGGCATGATCTTGAGATTGGAC
CTGGAGCTCCAAAGATTTTCAATTGCGTGATTGAAATTGGGGGGGAGCAA
GGTGAAATATGAACTTGACAAAAAATCTGGACTGATCATGGTTGATCGTG
TTCTTTACTCTTCAGTTGTGTACCCCCATAACTATGGTTTCATACCTCGT
ACTCTTTGCGAAGACAATGATCCCCTTGATGTCCTGATCATCATGCAGGA
GCCAGTTCTTCCAGGCTGCTTTCTTCGGGCTAAAGCCATCGGACTCATGC
CTATGATTGATCAGGGTGAGAAAGATGATAAGATCATTGCTGTCTGTGCT
GATGATCCCGAGTACCGACACTACAATGACATTAAGGAGCTTCCACCACA
TCGTTTGGCTGAGATCCGCCGCTTCTTTGAAGACTACAAGNAAAATG
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