CK937319

Overview
NameCK937319
Unique NameCK937319
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Homology
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_ECOLI (Inorganic pyrophosphatase OS=Escherichia coli (strain K12) GN=ppa PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 8.928e-21
Identity = 48/115 (41.74%), Postives = 72/115 (62.61%), Query Frame = 1
Query:  352 VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYK 690
            +KYE+DK+SG + VDR + +++ YP NYG+I  TL  D DP+DVL+    P+ PG  +R + +G++ M D+  +D K++AV       EY H  D+ +LP    A+I  FFE YK
Sbjct:   29 IKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDLPELLKAQIAHFFEHYK 143          
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_ECOL6 (Inorganic pyrophosphatase OS=Escherichia coli O6 GN=ppa PE=3 SV=3)

HSP 1 Score: 100.523 bits (249), Expect = 8.928e-21
Identity = 49/115 (42.61%), Postives = 72/115 (62.61%), Query Frame = 1
Query:  352 VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAV--CADDPEYRHYNDIKELPPHRLAEIRRFFEDYK 690
            +KYE+DK+SG + VDR + +++ YP NYG+I  TL  D DP+DVL+    P+ PG  +R + +G++ M D+  +D K+IAV       EY H  D+ +LP    A+I  FFE YK
Sbjct:   29 IKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGEDAKLIAVPHTKLSKEYDHIKDVNDLPELLKAQIAHFFEHYK 143          
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_ECO57 (Inorganic pyrophosphatase OS=Escherichia coli O157:H7 GN=ppa PE=3 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 8.928e-21
Identity = 48/115 (41.74%), Postives = 72/115 (62.61%), Query Frame = 1
Query:  352 VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYK 690
            +KYE+DK+SG + VDR + +++ YP NYG+I  TL  D DP+DVL+    P+ PG  +R + +G++ M D+  +D K++AV       EY H  D+ +LP    A+I  FFE YK
Sbjct:   29 IKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDLPELLKAQIAHFFEHYK 143          
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_YERPE (Inorganic pyrophosphatase OS=Yersinia pestis GN=ppa PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.166e-20
Identity = 47/115 (40.87%), Postives = 74/115 (64.35%), Query Frame = 1
Query:  352 VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCAD--DPEYRHYNDIKELPPHRLAEIRRFFEDYK 690
            +KYE+DK++G + VDR + +++ YP NYG+I  TL  D DP+DVL+    P+ PG  +R + +G++ M D+  +D K++AV       EY H  D+++LP    A+I+ FFE YK
Sbjct:   29 IKYEIDKETGSLFVDRFMSTAMFYPCNYGYINNTLSLDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGEDAKLVAVPHSKLTKEYDHVKDVQDLPELLKAQIKHFFEHYK 143          
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_SALTY (Inorganic pyrophosphatase OS=Salmonella typhimurium GN=ppa PE=3 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.166e-20
Identity = 48/115 (41.74%), Postives = 72/115 (62.61%), Query Frame = 1
Query:  352 VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAV--CADDPEYRHYNDIKELPPHRLAEIRRFFEDYK 690
            +KYE+DK+SG + VDR + +++ YP NYG+I  TL  D DP+DVL+    P+ PG  +R + +G++ M D+  +D K++AV       EY H  D+ +LP    A+I  FFE YK
Sbjct:   29 IKYEVDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGAVIRCRPVGVLKMTDESGEDAKLVAVPHTKLSKEYDHIKDVNDLPELLKAQITHFFEHYK 143          
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_SALTI (Inorganic pyrophosphatase OS=Salmonella typhi GN=ppa PE=3 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.166e-20
Identity = 48/115 (41.74%), Postives = 72/115 (62.61%), Query Frame = 1
Query:  352 VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAV--CADDPEYRHYNDIKELPPHRLAEIRRFFEDYK 690
            +KYE+DK+SG + VDR + +++ YP NYG+I  TL  D DP+DVL+    P+ PG  +R + +G++ M D+  +D K++AV       EY H  D+ +LP    A+I  FFE YK
Sbjct:   29 IKYEVDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGAVIRCRPVGVLKMTDESGEDAKLVAVPHTKLSKEYDHIKDVNDLPELLKAQITHFFEHYK 143          
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_HAEIN (Inorganic pyrophosphatase OS=Haemophilus influenzae GN=ppa PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.166e-20
Identity = 53/117 (45.30%), Postives = 73/117 (62.39%), Query Frame = 1
Query:  343 GSKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRH-YNDIKELPPHRLAEIRRFFEDYK 690
            GS  K E ++K     +DRV  +    P NYGFIP+TL ED D LDVL+I ++P+  G FL AK IG+M  +D GE DDKI+ V ADD +  + YN + +LP + + +I   F +YK
Sbjct:   27 GSCHKIEWNRKVAAFQLDRVEPAIFAKPTNYGFIPQTLDEDGDELDVLLITRQPLATGVFLEAKVIGVMKFVDDGEVDDKIVCVPADDRDTGNAYNSLADLPANLIKQIEFHFNNYK 143          
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_VIBPA (Inorganic pyrophosphatase OS=Vibrio parahaemolyticus GN=ppa PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20
Identity = 46/115 (40.00%), Postives = 71/115 (61.74%), Query Frame = 1
Query:  352 VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAV--CADDPEYRHYNDIKELPPHRLAEIRRFFEDYK 690
            +KYE+DK SG + VDR + + + YP NYG++  TL  D DP+DVL+    P++PG  +R + +G++ M D+  +D K++AV       EY H  D+ ++P    A+I  FFE YK
Sbjct:   29 IKYEVDKDSGAVFVDRFMSAPMFYPCNYGYVNNTLSLDGDPVDVLVPTPYPLMPGSVIRCRPVGVLKMTDESGEDAKVVAVPHSKISKEYEHIQDVGDIPELLKAQITHFFERYK 143          
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_RHORT (Inorganic pyrophosphatase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=ppa PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.431e-20
Identity = 47/115 (40.87%), Postives = 74/115 (64.35%), Query Frame = 1
Query:  352 VKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADD--PEYRHYNDIKELPPHRLAEIRRFFEDYK 690
            VKYE+DK+SG + VDR L++++ YP NYGF+P TL +D DP+DV+++ + PV  G  +R + +G++ M D+  +D+KI+ V      P + + N+  +L P  L  I  FF  YK
Sbjct:   29 VKYEVDKESGAMFVDRFLHTAMHYPCNYGFVPHTLSDDGDPVDVMVVGRIPVAVGSVMRTRPVGVLYMEDEAGRDEKILGVPHSKLYPYHDNVNNFGDLRPIELRRIEHFFAHYK 143          
BLAST of CK937319 vs. ExPASy Swiss-Prot
Match: IPYR_BUCAI (Inorganic pyrophosphatase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ppa PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.431e-20
Identity = 50/117 (42.74%), Postives = 71/117 (60.68%), Query Frame = 1
Query:  346 SKVKYELDKKSGLIMVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADD--PEYRHYNDIKELPPHRLAEIRRFFEDYK 690
            S +KYE+DKKSG++ VDR + + + YP NYG+I  TL  D DPLDVL+    P+   C +  K IG++ M D+   D KIIAV       EY++ NDI ++      +I  FF++YK
Sbjct:   27 SPIKYEVDKKSGMLFVDRFIPTPMFYPCNYGYINHTLSLDGDPLDVLVPSHYPIKSSCVIHCKPIGILNMQDESGDDAKIIAVPKSKICQEYKNINDISDISELLKKQITHFFQNYK 143          
The following BLAST results are available for this feature:
BLAST of CK937319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
IPYR_ECOLI8.928e-2141.74Inorganic pyrophosphatase OS=Escherichia coli (str... [more]
IPYR_ECOL68.928e-2142.61Inorganic pyrophosphatase OS=Escherichia coli O6 G... [more]
IPYR_ECO578.928e-2141.74Inorganic pyrophosphatase OS=Escherichia coli O157... [more]
IPYR_YERPE1.166e-2040.87Inorganic pyrophosphatase OS=Yersinia pestis GN=pp... [more]
IPYR_SALTY1.166e-2041.74Inorganic pyrophosphatase OS=Salmonella typhimuriu... [more]
IPYR_SALTI1.166e-2041.74Inorganic pyrophosphatase OS=Salmonella typhi GN=p... [more]
IPYR_HAEIN1.166e-2045.30Inorganic pyrophosphatase OS=Haemophilus influenza... [more]
IPYR_VIBPA1.989e-2040.00Inorganic pyrophosphatase OS=Vibrio parahaemolytic... [more]
IPYR_RHORT4.431e-2040.87Inorganic pyrophosphatase OS=Rhodospirillum rubrum... [more]
IPYR_BUCAI4.431e-2042.74Inorganic pyrophosphatase OS=Buchnera aphidicola s... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004511_D03 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIF_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937319 ID=CK937319; Name=CK937319; organism=Citrus sinensis; type=EST; length=697bp
TCTTGCTTTCCTCTACTTAAGCGCCCGTAGAGGAACTTAACTTTAATATC
TTCGCCATTACGCCTCTCTCTTTTCGAGATCGGGGCGTTTCTTTGTGGTC
TTGAAGCTTCGTTCTCGTTAGGCCCTGTTTGGCTTTCAGTACTTGAACCG
TTACGGTTATGATGGCTCCACCAATTGAGACTTCAAGCAAAACTCCTGTC
TCCCAACCTCCAGCACATCCTCCGCTTAATGAAAGGATACTTTCTTCAAT
GAGCAGGAGGTCTGTTGCTGCACATCCTTGGCATGATCTTGAGATTGGAC
CTGGAGCTCCAAAGATTTTCAATTGCGTGATTGAAATTGGGGGGGAGCAA
GGTGAAATATGAACTTGACAAAAAATCTGGACTGATCATGGTTGATCGTG
TTCTTTACTCTTCAGTTGTGTACCCCCATAACTATGGTTTCATACCTCGT
ACTCTTTGCGAAGACAATGATCCCCTTGATGTCCTGATCATCATGCAGGA
GCCAGTTCTTCCAGGCTGCTTTCTTCGGGCTAAAGCCATCGGACTCATGC
CTATGATTGATCAGGGTGAGAAAGATGATAAGATCATTGCTGTCTGTGCT
GATGATCCCGAGTACCGACACTACAATGACATTAAGGAGCTTCCACCACA
TCGTTTGGCTGAGATCCGCCGCTTCTTTGAAGACTACAAGNAAAATG
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