CK937306

Overview
NameCK937306
Unique NameCK937306
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length369
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK937306 vs. ExPASy Swiss-Prot
Match: C85A_PHAVU (Cytochrome P450 85A OS=Phaseolus vulgaris GN=BA13 PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 4.658e-13
Identity = 37/91 (40.66%), Postives = 50/91 (54.95%), Query Frame = 2 
Query:   98 LFLLPFASICFILCFY-LFLKFISSNGRNLPLPPGTLSWPYIAETFDLYSQNPNVFFASKVKRYGSIFKTHILGCPCVMISSPEAAKFVLV 367
            LF+     +  +LCF    LK+     R   LPPG + WP   ET +   Q PN F  +K  RYGS FK+HILGCP ++   PE  +F+L+
Sbjct:    3 LFMAILGVLVLLLCFCSALLKWNEVRFRRKGLPPGAMGWPVFGETTEFLKQGPN-FMKNKRARYGSFFKSHILGCPTIVSMDPELNRFILM 92
[Close]
BLAST of CK937306 vs. ExPASy Swiss-Prot
Match: C85A1_SOLLC (Cytochrome P450 85A1 OS=Solanum lycopersicum GN=CYP85A1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.499e-11
Identity = 35/95 (36.84%), Postives = 50/95 (52.63%), Query Frame = 2 
Query:   83 MDFTFLFLLPFASICFILCFYLFLKFISSNGRNLPLPPGTLSWPYIAETFDLYSQNPNVFFASKVKRYGSIFKTHILGCPCVMISSPEAAKFVLV 367
            M F  +FL  F  +C      L    +  N +NLP  PGT+ WP   ET +     P+ F  ++  RYGS FK+HILGCP ++    E  +++LV
Sbjct:    1 MAFFLIFLSSFFGLCIFCTALLRWNQVKYNQKNLP--PGTMGWPLFGETTEFLKLGPS-FMKNQRARYGSFFKSHILGCPTIVSMDSELNRYILV 92
The following BLAST results are available for this feature:
BLAST of CK937306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
C85A_PHAVU4.658e-1340.66Cytochrome P450 85A OS=Phaseolus vulgaris GN=BA13 ... [more]
C85A1_SOLLC1.499e-1136.84Cytochrome P450 85A1 OS=Solanum lycopersicum GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004511_G03 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIF_G03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937306 ID=CK937306; Name=CK937306; organism=Citrus sinensis; type=EST; length=369bp
GGGGCACACAACTCCTTCACCACTTAACTACCACTACTGCTACTACTTCT
TCTACTTCTCAAGCACAAAAAACATATCAAGCATGGATTTTACTTTCTTG
TTTCTCTTACCATTTGCTTCCATTTGCTTCATCCTCTGCTTTTATTTGTT
TCTCAAGTTCATTTCCTCAAACGGAAGAAATTTGCCTCTCCCTCCAGGCA
CCTTAAGCTGGCCTTATATTGCAGAAACCTTTGATCTCTATTCTCAAAAC
CCAAACGTGTTCTTTGCTTCCAAAGTGAAAAGGTATGGTTCTATCTTCAA
GACTCACATATTGGGATGTCCTTGCGTAATGATTTCGAGCCCGGAGGCTG
CAAAATTTGTGCTTGTAAC
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