CK937295
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937295 vs. ExPASy Swiss-Prot
Match: NLTP1_AMAHP (Non-specific lipid-transfer protein 1 OS=Amaranthus hypochondriacus PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.316e-20 Identity = 46/94 (48.94%), Postives = 62/94 (65.96%), Query Frame = 1 Query: 88 AITCGQVTASLAPCIPFLRTGGRFPPPP-CCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCYRVR 366 A+TC VT +L PC+ +L+ G PPP CC+GVRSL AA+T DR+ ACNC+K A + + VAA L SQCGVR+ Y +SP+ +C V+ Sbjct: 1 AVTCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSVQ 94
BLAST of CK937295 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSJ (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. japonica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.020e-19 Identity = 42/99 (42.42%), Postives = 63/99 (63.64%), Query Frame = 1 Query: 67 VTAPATNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCYRV 363 V A+ A++CG VT+S+APC+ ++ P CCSGVR+LNG A ++ DR+ AC+CLK + R + AA +PS+CGV + + IS S DC ++ Sbjct: 22 VAERASAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of CK937295 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSI (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. indica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.020e-19 Identity = 42/99 (42.42%), Postives = 63/99 (63.64%), Query Frame = 1 Query: 67 VTAPATNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCYRV 363 V A+ A++CG VT+S+APC+ ++ P CCSGVR+LNG A ++ DR+ AC+CLK + R + AA +PS+CGV + + IS S DC ++ Sbjct: 22 VAERASAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of CK937295 vs. ExPASy Swiss-Prot
Match: NLTPC_ARATH (Non-specific lipid-transfer protein 12 OS=Arabidopsis thaliana GN=LTP12 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.500e-19 Identity = 46/98 (46.94%), Postives = 62/98 (63.27%), Query Frame = 1 Query: 61 IPVTAPATNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDC 354 I + +P + I CG VT++LA C+ +L G P CC GV+SL A+TTPDR+ C CLK A I+G+ ++ A LP+ CGV IPY IS ST+C Sbjct: 16 IYMASPTESTIQCGTVTSTLAQCLTYLTNSGPLPSQ-CCVGVKSLYQLAQTTPDRKQVCECLKLAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNC 112
BLAST of CK937295 vs. ExPASy Swiss-Prot
Match: NLTP1_HELAN (Non-specific lipid-transfer protein AP10 OS=Helianthus annuus PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.309e-18 Identity = 40/89 (44.94%), Postives = 60/89 (67.42%), Query Frame = 1 Query: 88 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDC 354 AITC VT +L PC+P+LR+GG+ P P CC+G + L GA RT DR+ AC C K A ++ ++P++A+ LP +CG+ I+P+ +C Sbjct: 26 AITCNDVTGNLTPCLPYLRSGGK-PTPACCAGAKKLLGATRTQADRRTACKCAKTAAPQLK-VRPDMASSLPGKCGISTSIPINPNVNC 112
BLAST of CK937295 vs. ExPASy Swiss-Prot
Match: NLTP1_HORVU (Non-specific lipid-transfer protein 1 OS=Hordeum vulgare GN=LTP1 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.233e-18 Identity = 42/95 (44.21%), Postives = 59/95 (62.11%), Query Frame = 1 Query: 79 ATNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCYRV 363 A A+ CGQV + + PC+ +++ GG P CC+GVR L+ A+++ DRQ CNCLK I + N AA +PS+C V +PY ISP DC R+ Sbjct: 23 AAVALNCGQVDSKMKPCLTYVQ-GGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIHNLNLNNAASIPSKCNVNVPYTISPDIDCSRI 116
BLAST of CK937295 vs. ExPASy Swiss-Prot
Match: NLTPB_ARATH (Non-specific lipid-transfer protein 11 OS=Arabidopsis thaliana GN=LTP11 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.108e-17 Identity = 44/89 (49.44%), Postives = 53/89 (59.55%), Query Frame = 1 Query: 88 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDC 354 AI C QV LA C+P+L+ GG P P CC+G+ SL AA DRQ ACNCLK TI GI + A LP++CGV I S + DC Sbjct: 28 AIACPQVNMYLAQCLPYLKAGGN-PSPMCCNGLNSLKAAAPEKADRQVACNCLKSVANTIPGINDDFAKQLPAKCGVNIGVPFSKTVDC 115
BLAST of CK937295 vs. ExPASy Swiss-Prot
Match: NLTP5_ARATH (Non-specific lipid-transfer protein 5 OS=Arabidopsis thaliana GN=LTP5 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.448e-17 Identity = 54/108 (50.00%), Postives = 64/108 (59.26%), Query Frame = 1 Query: 58 CIPVTAPATN--AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLK---RAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCYRVR 366 C+ VTAP + AI+CG VT SL C +L GG F P CCSGV+ LN ARTT DRQ AC C++ RA G+ + AA LP C VRI Y IS T+C VR Sbjct: 14 CMLVTAPMASEAAISCGAVTGSLGQCYNYLTRGG-FIPRGCCSGVQRLNSLARTTRDRQQACRCIQGAARALGS--RLNAGRAARLPGACRVRISYPISARTNCNTVR 118
BLAST of CK937295 vs. ExPASy Swiss-Prot
Match: NLTP7_ARATH (Non-specific lipid-transfer protein 7 OS=Arabidopsis thaliana GN=LTP7 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.891e-17 Identity = 46/101 (45.54%), Postives = 65/101 (64.36%), Query Frame = 1 Query: 64 PVTAPATNAITCGQVTASLAPCIPFLRTGG-RFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTI-RGIKPNVAAGLPSQCGVRIPY--KISPSTDC 354 P+TA A A++CG+V ++L PC +L GG P P CC+GVR LNG TT DR+ AC C+K A + G+ + AAG+P +CG++IPY +I +T C Sbjct: 20 PITAKA--ALSCGEVNSNLKPCTGYLTNGGITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAARNVGPGLNADRAAGIPRRCGIKIPYSTQIRFNTKC 118
BLAST of CK937295 vs. ExPASy Swiss-Prot
Match: NLTP2_ARATH (Non-specific lipid-transfer protein 2 OS=Arabidopsis thaliana GN=LTP2 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.891e-17 Identity = 52/106 (49.06%), Postives = 63/106 (59.43%), Query Frame = 1 Query: 58 CIPVTAPAT-NAI-TCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIR-GIKPNVAAGLPSQCGVRIPYKISPSTDCYRVR 366 C+ V P T NA+ +CG V +LA CI +L G CC+GV +L A TTPDRQ AC CL+ A + G+ AAGLPS C V IPYKIS ST+C VR Sbjct: 14 CMIVAGPITANALMSCGTVNGNLAGCIAYLTRGAPLTQG-CCNGVTNLKNMASTTPDRQQACRCLQSAAKAVGPGLNTARAAGLPSACKVNIPYKISASTNCNTVR 118 The following BLAST results are available for this feature:
BLAST of CK937295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937295 ID=CK937295; Name=CK937295; organism=Citrus sinensis; type=EST; length=584bpback to top |