CN187188

Overview
NameCN187188
Unique NameCN187188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187188 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 8.036e-48
Identity = 105/242 (43.39%), Postives = 141/242 (58.26%), Query Frame = 1
Query:   49 MGLFRSPTMAMFLLFLFTVSSALDM--SIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYR 765
            MGL     +   ++      +A+++  +I   DK  ES+ + W        ++E W   H +      EK +RF  FK N  FI  HN   +  Y++ LNRF D+   E+R+ ++G       +   S     Y       LP SVDWR+KGAV  VKDQG CGSCWAFST+ +VEGIN I TGSL+SLSEQEL+DCDT+ N+GC GGLMD AFE+I +NGG+ TE  YPY+A  G+C+  R
Sbjct:    1 MGLLSKKLLVASMVAAVLAVAAVELCSAIPMEDKDLESEEALW-------DLYERWQSAH-RVRRHHAEKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGDLRRDTPSKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGTCNVAR 234          
BLAST of CN187188 vs. ExPASy Swiss-Prot
Match: CYSP1_HORVU (Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.050e-47
Identity = 105/242 (43.39%), Postives = 140/242 (57.85%), Query Frame = 1
Query:   49 MGLFRSPTMAMFLLFLFTVSSALDM--SIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYR 765
            MGL     +   ++      +A+++  +I   DK  ES+ + W        ++E W   H +      EK +RF  FK N  FI  HN   +  Y++ LNRF D+   E+R+ ++G           S     Y       LP SVDWR+KGAV  VKDQG CGSCWAFST+ +VEGIN I TGSL+SLSEQEL+DCDT+ N+GC GGLMD AFE+I +NGG+ TE  YPY+A  G+C+  R
Sbjct:    1 MGLLSKKLLVASMVAAVLAVAAVELCSAIPMEDKDLESEEALW-------DLYERWQSAH-RVRRHHAEKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGDLRRDTPAKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGTCNVAR 234          
BLAST of CN187188 vs. ExPASy Swiss-Prot
Match: PAPA2_CARPA (Chymopapain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 1.371e-47
Identity = 94/192 (48.96%), Postives = 134/192 (69.79%), Query Frame = 1
Query:  181 DEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKR-TSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 753
            + ++ +F++W +KH K Y ++ EK  RFEIF+DNL +IDE N +N +Y +GLN FADL+N+E++  Y+G  F A+  T L+   ++ +  +     P S+DWR KGAV  VK+QG+CGSCWAFSTIA VEGINKIVTG+L+ LSEQELVDCD  ++ GC GG    + +++ +N G+ T + YPY+A    C
Sbjct:   42 ERLIQLFDSWMLKHNKIYESIDEKIYRFEIFRDNLMYIDETNKKNNSYWLGLNGFADLSNDEFKKKYVG--FVAEDFTGLEHFDNEDFTYKHVTNYPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCD-KHSYGCKGGYQTTSLQYVANN-GVHTSKVYPYQAKQYKC 229          
BLAST of CN187188 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.160e-44
Identity = 98/229 (42.79%), Postives = 138/229 (60.26%), Query Frame = 1
Query:   88 LFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKMP 774
            LF++   S  D SIV Y +   + +      + ++ +FE+W +KH K Y  + EK  RFEIFKDNL++IDE N +N +Y +GLN FAD++N+E++  Y G+  G   T+  S   +  L      +P+ VDWR+KGAV  VK+QGSCGSCWAFS +  +EGI KI TG+L   SEQEL+DCD   + GCNGG    A + ++   GI     YPY+ +   C +  K P
Sbjct:   17 LFVYMGLSFGDFSIVGYSQNDLTST------ERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTGSIAGNYTTTELSY--EEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDRR-SYGCNGGYPWSALQ-LVAQYGIHYRNTYPYEGVQRYCRSREKGP 235          
BLAST of CN187188 vs. ExPASy Swiss-Prot
Match: CYSP5_DICDI (Cysteine proteinase 5 OS=Dictyostelium discoideum GN=cprE PE=2 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 4.127e-44
Identity = 90/186 (48.39%), Postives = 119/186 (63.98%), Query Frame = 1
Query:  199 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCD 756
            F  W + H K+Y +  E   R+ IFK N+ ++ + NS+     +GLN FAD+TNEEYR+ YLG +F A  +SL   + ++       A   S DWR +GAV  VK+QG CG CW+FST  + EG +    G L+SLSEQ L+DC T  N GC+GGLM YAFE+II+N GIDTE  YPYKA +G C+
Sbjct:   30 FTDWMITHQKSYTS-EEFGARYNIFKANMDYVQQWNSKGSETVLGLNNFADITNEEYRNTYLGTKFDA--SSLIGTQEEKVFTTSSAA---SKDWRSEGAVTPVKNQGQCGGCWSFSTTGSTEGAHFQSKGELVSLSEQNLIDCSTE-NSGCDGGLMTYAFEYIINNNGIDTESSYPYKAENGKCE 208          
BLAST of CN187188 vs. ExPASy Swiss-Prot
Match: BROM1_ANACO (Fruit bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.201e-43
Identity = 97/227 (42.73%), Postives = 136/227 (59.91%), Query Frame = 1
Query:   85 LLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENR-TYKVGLNRFADLTNEEYRSMYLGARF--GAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCD 756
            L+FLF    A+  S         S +S    +D +M  FE W  ++G+ Y    EK +RF+IFK+N++ I+  NS N  +Y +G+N+F D+T  E+ + Y G       +R  + S            A+P S+DWR  GAV EVK+Q  CGSCW+F+ IA VEGI KI TG L+SLSEQE++DC  SY  GC GG ++ A++FII N G+ TEE+YPY A  G+C+
Sbjct:    7 LVFLFLFLCAMWAS--------PSAASRDEPNDPMMKRFEEWMAEYGRVYKDDDEKMRRFQIFKNNVKHIETFNSRNENSYTLGINQFTDMTKSEFVAQYTGVSLPLNIEREPVVSFDDVNI-----SAVPQSIDWRDYGAVNEVKNQNPCGSCWSFAAIATVEGIYKIKTGYLVSLSEQEVLDCAVSY--GCKGGWVNKAYDFIISNNGVTTEENYPYLAYQGTCN 218          
BLAST of CN187188 vs. ExPASy Swiss-Prot
Match: PAPA4_CARPA (Papaya proteinase 4 OS=Carica papaya PE=1 SV=3)

HSP 1 Score: 175.252 bits (443), Expect = 3.494e-43
Identity = 94/215 (43.72%), Postives = 127/215 (59.07%), Query Frame = 1
Query:  109 SALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 753
            S  D SIV Y +   + +      + ++ +F +W +KH K Y  + EK  RFEIFKDNL++IDE N     Y +GLN F+DL+N+E++  Y+G+              + ++      LP+SVDWR KGAV  VK QG C SCWAFST+A VEGINKI TG+L+ LSEQELVDCD   + GCN G    + +++  N GI     YPY A   +C
Sbjct:   24 SYCDFSIVGYSQDDLTST------ERLIQLFNSWMLKHNKNYKNVDEKLYRFEIFKDNLKYIDERNKMINGYWLGLNEFSDLSNDEFKEKYVGS---LPEDYTNQPYDEEFVNEDIVDLPESVDWRAKGAVTPVKHQGYCESCWAFSTVATVEGINKIKTGNLVELSEQELVDCD-KQSYGCNRGYQSTSLQYVAQN-GIHLRAKYPYIAKQQTC 227          
BLAST of CN187188 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.328e-42
Identity = 92/192 (47.92%), Postives = 117/192 (60.94%), Query Frame = 1
Query:  199 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY---NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 753
            ++ W   H K Y    E+E R  I++ NL+FI  HN E      TY+VG+N   D+TNEE     +  R GA R S +S ++  +       LPD+VDWR+KG V EVK QGSCG+CWAFS + A+EG  K+ TG LISLS Q LVDC       N+GC GG M  AF++IIDNGGI+ +  YPYKA D  C
Sbjct:   36 WDLWKKTHEKEYKDKNEEEVRRLIWEKNLKFIMIHNLEYSMGMHTYQVGMNDMGDMTNEE-----ISCRMGALRISRQSPKTVTFRSYSNRTLPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDEKC 222          
BLAST of CN187188 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.863e-42
Identity = 85/186 (45.70%), Postives = 119/186 (63.98%), Query Frame = 1
Query:  199 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 753
            F  + V++GK+Y +  E  KRF IF ++L+ +   N +  +Y++G+NRFAD++ EE+R+  LGA      T   + R    +     ALP++ DWR+ G V+ VK+QG CGSCW FST  A+E      TG  ISLSEQ+LVDC  ++N  GCNGGL   AFE+I  NGG+DTEE YPY+ ++G C
Sbjct:   59 FARFAVRYGKSYESAAEVHKRFRIFSESLQLVRSTNRKGLSYRLGINRFADMSWEEFRATRLGAAQNCSATLTGNHR----MRAAAVALPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLVDCGFAFNNFGCNGGLPSQAFEYIKYNGGLDTEESYPYQGVNGIC 240          
BLAST of CN187188 vs. ExPASy Swiss-Prot
Match: CATL_DROME (Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 5.045e-42
Identity = 92/199 (46.23%), Postives = 123/199 (61.81%), Query Frame = 1
Query:  181 DEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMYLGARFGAK---RTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 753
            D VM  +  + ++H K Y    E+  R +IF +N   I +HN        ++K+ +N++ADL + E+R +  G  +      R + +S +   ++      LP SVDWR KGAV  VKDQG CGSCWAFS+  A+EG +   +G L+SLSEQ LVDC T Y N GCNGGLMD AF +I DNGGIDTE+ YPY+AID SC
Sbjct:   53 DVVMEEWHTFKLEHRKNYQDETEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQLMNGFNYTLHKQLRAADESFKGVTFISPAHVTLPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSC 251          
The following BLAST results are available for this feature:
BLAST of CN187188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
CYSP2_HORVU8.036e-4843.39Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]
CYSP1_HORVU1.050e-4743.39Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=E... [more]
PAPA2_CARPA1.371e-4748.96Chymopapain OS=Carica papaya PE=1 SV=2[more]
PAPA1_CARPA3.160e-4442.79Papain OS=Carica papaya PE=1 SV=1[more]
CYSP5_DICDI4.127e-4448.39Cysteine proteinase 5 OS=Dictyostelium discoideum ... [more]
BROM1_ANACO1.201e-4342.73Fruit bromelain OS=Ananas comosus PE=1 SV=1[more]
PAPA4_CARPA3.494e-4343.72Papaya proteinase 4 OS=Carica papaya PE=1 SV=3[more]
CATS_MOUSE1.328e-4247.92Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1[more]
CYSP2_MAIZE3.863e-4245.70Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
CATL_DROME5.045e-4246.23Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0004B05_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0004B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187188 ID=CN187188; Name=CN187188; organism=Citrus sinensis; type=EST; length=786bp
GCCTTTTTCTTCTCCCAAAAAGAAAAAAAAAAGCTCTTTTCTCCCTTGAT
GGGTTTGTTCAGATCACCAACCATGGCCATGTTTTTACTTTTTCTCTTCA
CTGTATCATCTGCCTTGGACATGTCGATTGTATCTTATGATAAAACCCAT
GAGTCAAAATCTAGCAGCTGGAGGACCGACGATGAGGTTATGGGTATGTT
CGAGGCCTGGTTTGTGAAGCATGGCAAGGCTTATAACGCTTTGGGTGAAA
AAGAGAAAAGGTTTGAGATCTTTAAGGACAATCTTAGGTTTATTGATGAA
CATAACTCAGAGAACCGGACCTACAAGGTTGGGTTGAACCGGTTTGCTGA
TTTGACCAACGAGGAGTACCGGTCCATGTATCTGGGTGCACGCTTTGGTG
CTAAAAGGACTTCCTTGAAATCAAAGAGGAGCGATCGTTATCTGCCACGT
GTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGAAAGGAGCTGT
CGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCATTTTCAA
CCATTGCTGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGCCTGATC
TCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAATGAAGG
ATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTGATAATG
GAGGTATTGACACAGAAGAAGATTACCCCTACAAAGCCATTGATGGTAGC
TGTGACACATATCGGAAAATGCCAAAGTAGTTACAA
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