CN187188

Overview
NameCN187188
Unique NameCN187188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187188 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 1.623e-40
Identity = 94/222 (42.34%), Postives = 127/222 (57.21%), Query Frame = 1
Query:   73 MAMFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYK 735
            M + +  +FT+   L +S +S       K        +    F  W   + KAY    E   R+E FK N+ ++   NS+     +GLN+ ADL+NEEYR  YLG R   K      +     L R     P +VDWR+K AV  VKDQG CGSC++FST  +VEG+  I TG L+SLSEQ ++DC +S+ NEGCNGGLM  AFE+II N G+++EE YPY+
Sbjct:    1 MRLSITLIFTLI-VLSISFISAGNVFSHK--------QYQDSFIDWMRSNNKAYTHK-EFMPRYEEFKKNMDYVHNWNSKGSKTVLGLNQHADLSNEEYRLNYLGTRAHIKLNGYHKRNLGLRLNRPQFKQPLNVDWREKDAVTPVKDQGQCGSCYSFSTTGSVEGVTAIKTGKLVSLSEQNILDCSSSFGNEGCNGGLMTNAFEYIIKNNGLNSEEQYPYE 212          
BLAST of CN187188 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.120e-40
Identity = 84/186 (45.16%), Postives = 116/186 (62.37%), Query Frame = 1
Query:  199 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 753
            F  + V++GK+Y +  E  +RF IF ++L  +   N +   Y++G+NRF+D++ EE+++  LGA      T      +  +L R   ALP++ DWR+ G V+ VK+Q  CGSCW FST  A+E      TG  ISLSEQ+LVDC   +N  GCNGGL   AFE+I  NGGIDTEE YPYK ++G C
Sbjct:   61 FARFAVRYGKSYESAAEVRRRFRIFSESLEEVRSTNRKGLPYRLGINRFSDMSWEEFQATRLGAAQTCSATL-----AGNHLMRDAAALPETKDWREDGIVSPVKNQAHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDCAGGFNNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVNGVC 241          
BLAST of CN187188 vs. ExPASy Swiss-Prot
Match: CATS_HUMAN (Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3)

HSP 1 Score: 165.622 bits (418), Expect = 2.768e-40
Identity = 86/188 (45.74%), Postives = 115/188 (61.17%), Query Frame = 1
Query:  208 WFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY--NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 753
            W   +GK Y    E+  R  I++ NL+F+  HN E+     +Y +G+N   D+T+EE  S+       + R   + +R+  Y       LPDSVDWR+KG V EVK QGSCG+CWAFS + A+E   K+ TG L+SLS Q LVDC T    N+GCNGG M  AF++IIDN GID++  YPYKA+D  C
Sbjct:   31 WKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSL-----MSSLRVPSQWQRNITYKSNPNRILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKC 213          
BLAST of CN187188 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 3.616e-40
Identity = 83/187 (44.39%), Postives = 120/187 (64.17%), Query Frame = 1
Query:  217 KHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENR----TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDS--VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDC--DTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 753
            K G+ Y  L E+  R  +F DNL++I+E N +      TY + +N+F+D+TNE++ ++  G + G +  ++ +           +A P+S  VDWR KGAV  VKDQG CGSCWAFST   +EG + + TG L+SLSEQ+LVDC   + YN+GCNGG ++ A  ++ DNGG+DTE  YPY+A D +C
Sbjct:   26 KFGRKYVDLEEERYRLNVFLDNLQYIEEFNKKYERGEVTYNLAINQFSDMTNEKFNAVMKGYKKGPRPAAVFTST---------DAAPESTEVDWRTKGAVTPVKDQGQCGSCWAFSTTGGIEGQHFLKTGRLVSLSEQQLVDCAGGSYYNQGCNGGWVERAIMYVRDNGGVDTESSYPYEARDNTC 203          
BLAST of CN187188 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.616e-40
Identity = 91/201 (45.27%), Postives = 120/201 (59.70%), Query Frame = 1
Query:  181 DEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNS----ENRTYKVGLNRFADLTNEEYRSMYLG-----ARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 753
            D +   +  + ++H K Y    E+  R +IF +N   I +HN        +YK+GLN++AD+ + E++    G      +   +RT L       Y+P     +P SVDWR+ GAV  VKDQG CGSCWAFS+  A+EG +    G L+SLSEQ LVDC T Y N GCNGGLMD AF +I DNGGIDTE+ YPY+ ID SC
Sbjct:   22 DLIKEEWHTYKLQHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQGKVSYKLGLNKYADMLHHEFKETMNGYNHTLRQLMRERTGLVGAT---YIPPAHVTVPKSVDWREHGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEGIDDSC 219          
BLAST of CN187188 vs. ExPASy Swiss-Prot
Match: CATL1_MOUSE (Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 4.722e-40
Identity = 88/197 (44.67%), Postives = 117/197 (59.39%), Query Frame = 1
Query:  178 DDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 753
            D      +  W   H + Y    E+E R  I++ N+R I  HN E       + + +N F D+TNEE+R +  G R        K K+   +   +   +P SVDWR+KG V  VK+QG CGSCWAFS    +EG   + TG LISLSEQ LVDC  +  N+GCNGGLMD+AF++I +NGG+D+EE YPY+A DGSC
Sbjct:   22 DQTFSAEWHQWKSTHRRLYGT-NEEEWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEEFRQVVNGYRHQ------KHKKGRLFQEPLMLKIPKSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSC 211          
BLAST of CN187188 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 8.055e-40
Identity = 88/194 (45.36%), Postives = 119/194 (61.34%), Query Frame = 1
Query:  199 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDR-YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD--------TSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 753
            F ++  K  K+Y    E + RF +FK NL     H + + T + G+ +F+DLT  E+R  +LG +   KR  L +       LP     LP+  DWR+KGAV  VKDQGSCGSCWAFST  A+EG + + TG L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+++++GG+  E+DY Y   DGSC
Sbjct:   48 FTSFKSKFSKSYATKEEHDYRFGVFKSNLIKAKLHQNRDPTAEHGITKFSDLTASEFRRQFLGLK---KRLRLPAHAQKAPILPTTN--LPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLESGGVVQEKDYAYTGRDGSC 236          
BLAST of CN187188 vs. ExPASy Swiss-Prot
Match: CATL1_RAT (Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 8.055e-40
Identity = 88/197 (44.67%), Postives = 116/197 (58.88%), Query Frame = 1
Query:  178 DDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVG----LNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 753
            D      +  W   H + Y    E+E R  +++ N+R I  HN E    K G    +N F D+TNEE+R +  G R        K K+   +   +   +P +VDWR+KG V  VK+QG CGSCWAFS    +EG   + TG LISLSEQ LVDC     N+GCNGGLMD+AF++I +NGG+D+EE YPY+A DGSC
Sbjct:   22 DQTFNAQWHQWKSTHRRLYGT-NEEEWRRAVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQIVNGYRHQ------KHKKGRLFQEPLMLQIPKTVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSC 211          
BLAST of CN187188 vs. ExPASy Swiss-Prot
Match: CYSP4_DICDI (Cysteine proteinase 4 OS=Dictyostelium discoideum GN=cprD PE=2 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 3.061e-39
Identity = 91/219 (41.55%), Postives = 127/219 (57.99%), Query Frame = 1
Query:  103 VSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGS---LISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDG 747
            V S L + +VSY    +  S       +    F  W   H + Y++  E   R++IFK N+ ++ + NS+     +GLN FAD+TN+EYR+ YLG  F    ++L     ++    +      +VDWR +GAV  +K+QG CG CW+FST  + EG + I +G+   L+SLSEQ L+DC  SY N GC GGLM  AFE+II+N GIDTE  YPY A DG
Sbjct:    3 VLSFLCLLLVSYASAKQQFSEL-----QYRNAFTNWMQAHQRTYSS-EEFNARYQIFKSNMDYVHQWNSKGGETVLGLNVFADITNQEYRTTYLGTPFDG--SALIGTEEEK----IFSTPAPTVDWRAQGAVTPIKNQGQCGGCWSFSTTGSTEGAHFIASGTKKDLVSLSEQNLIDCSKSYGNNGCEGGLMTLAFEYIINNKGIDTESSYPYTAEDG 209          
BLAST of CN187188 vs. ExPASy Swiss-Prot
Match: P34_SOYBN (P34 probable thiol protease OS=Glycine max PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.997e-39
Identity = 92/237 (38.82%), Postives = 139/237 (58.65%), Query Frame = 1
Query:   73 MAMFLLFLFTVSSALDMSIVSYDKTHES----KSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRT---YKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEAL---PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 753
            M   +L LF   S L +S  S   TH S      + + T  +V  +F+ W  +HG+ Y+   E+ KR EIFK+N  +I + N+  ++   +++GLN+FAD+T +E+   YL A    K  S + K +++ + +   +    P S DWRKKG + +VK QG CG  WAFS   A+E  + I TG L+SLSEQELVDC    +EG   G    +FE+++++GGI T++DYPY+A +G C
Sbjct:    1 MGFLVLLLF---SLLGLSSSSSISTHRSILDLDLTKFTTQKQVSSLFQLWKSEHGRVYHNHEEEAKRLEIFKNNSNYIRDMNANRKSPHSHRLGLNKFADITPQEFSKKYLQA---PKDVSQQIKMANKKMKKEQYSCDHPPASWDWRKKGVITQVKYQGGCGRGWAFSATGAIEAAHAIATGDLVSLSEQELVDC-VEESEGSYNGWQYQSFEWVLEHGGIATDDDYPYRAKEGRC 230          
The following BLAST results are available for this feature:
BLAST of CN187188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
CYSP3_DICDI1.623e-4042.34Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
ALEU_HORVU2.120e-4045.16Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
CATS_HUMAN2.768e-4045.74Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3[more]
CYSP1_HOMAM3.616e-4044.39Digestive cysteine proteinase 1 OS=Homarus america... [more]
CATL_SARPE3.616e-4045.27Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1[more]
CATL1_MOUSE4.722e-4044.67Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2[more]
CYSP_PEA8.055e-4045.36Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
CATL1_RAT8.055e-4044.67Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV... [more]
CYSP4_DICDI3.061e-3941.55Cysteine proteinase 4 OS=Dictyostelium discoideum ... [more]
P34_SOYBN3.997e-3938.82P34 probable thiol protease OS=Glycine max PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0004B05_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0004B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187188 ID=CN187188; Name=CN187188; organism=Citrus sinensis; type=EST; length=786bp
GCCTTTTTCTTCTCCCAAAAAGAAAAAAAAAAGCTCTTTTCTCCCTTGAT
GGGTTTGTTCAGATCACCAACCATGGCCATGTTTTTACTTTTTCTCTTCA
CTGTATCATCTGCCTTGGACATGTCGATTGTATCTTATGATAAAACCCAT
GAGTCAAAATCTAGCAGCTGGAGGACCGACGATGAGGTTATGGGTATGTT
CGAGGCCTGGTTTGTGAAGCATGGCAAGGCTTATAACGCTTTGGGTGAAA
AAGAGAAAAGGTTTGAGATCTTTAAGGACAATCTTAGGTTTATTGATGAA
CATAACTCAGAGAACCGGACCTACAAGGTTGGGTTGAACCGGTTTGCTGA
TTTGACCAACGAGGAGTACCGGTCCATGTATCTGGGTGCACGCTTTGGTG
CTAAAAGGACTTCCTTGAAATCAAAGAGGAGCGATCGTTATCTGCCACGT
GTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGAAAGGAGCTGT
CGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCATTTTCAA
CCATTGCTGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGCCTGATC
TCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAATGAAGG
ATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTGATAATG
GAGGTATTGACACAGAAGAAGATTACCCCTACAAAGCCATTGATGGTAGC
TGTGACACATATCGGAAAATGCCAAAGTAGTTACAA
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