CK937289

Overview
NameCK937289
Unique NameCK937289
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937289 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.400e-18
Identity = 75/248 (30.24%), Postives = 116/248 (46.77%), Query Frame = 3
Query:  135 MSLKCAIGLGIADIIHSHGRA--ITLSELVSALDIQ-PTKTTGLFKLMRLLVHSG---CFNKTKVNGQ-EEAYGLTAASTLLIKDKP-YCFSPNVSLFLDPCFVGAFQSLSSWFKGTELTL-----WETVHGIKFWEFMYQNPGINQRFNEAMASDTEIMTSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVASLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLDD 839
            M LK AI L + +I+   G    ++ SE+ S L  + P     L +++RLL       C  K   +G+ E  YGL      L K++     SP   +  D         + SW+   +  L     +   +G+  +E+   +P  N+ FN+ M+  + I    ++  E  + FEGL SLVDVGGG G++   I   +P IK    DLPHV+   P    ++++ GDMF  +P ADA   K + H   D
Sbjct:   34 MILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVL------MESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKIL--ETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKADAVFMKWICHDWSD 273          
BLAST of CK937289 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.747e-18
Identity = 75/249 (30.12%), Postives = 119/249 (47.79%), Query Frame = 3
Query:  135 MSLKCAIGLGIADIIHSHGRAITLS--ELVSALDIQ-PTKTTGLFKLMRLLVHSGCFN---KTKVNGQ-EEAYGLTAASTLLIKDKPYCFSPNVSLFLDPCFVGAFQSL-SSWFKGTELTL-----WETVHGIKFWEFMYQNPGINQRFNEAMASDTEIMTSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVASLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLDDE 842
            M LK AI L + +I+   G    LS  +L S L  + P     L +++RLL          +T  +G+ E  YGL      L K++       VS+    C +   + L  SW+   +  L     +   +G+  +++   +P  N+ FN+ MA  + I    ++  E  + FEGL S+VDVGGG G++  +I   +P IK    DLPHV+   P+   ++++ GDMF  +P  DA   K + H   DE
Sbjct:   34 MVLKAAIELDLLEIMAKAGPGAFLSPNDLASQLPTKNPEAPVMLDRMLRLLASYSILTYSLRTLPDGKVERLYGLGPVCKFLTKNED-----GVSIAA-LCLMNQDKVLVESWYHLKDAVLDGGIPFNKAYGMTAFDYHGTDPRFNKVFNKGMADHSTITMKKIL--ETYKGFEGLTSIVDVGGGTGAVVNMIVSKYPSIKGINFDLPHVIEDAPQYPGVQHVGGDMFVSVPKGDAIFMKWICHDWSDE 274          
BLAST of CK937289 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.747e-18
Identity = 75/248 (30.24%), Postives = 116/248 (46.77%), Query Frame = 3
Query:  135 MSLKCAIGLGIADIIHSHGRA--ITLSELVSALDIQ-PTKTTGLFKLMRLLVHSG---CFNKTKVNGQ-EEAYGLTAASTLLIKDKP-YCFSPNVSLFLDPCFVGAFQSLSSWFKGTELTL-----WETVHGIKFWEFMYQNPGINQRFNEAMASDTEIMTSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVASLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLDD 839
            M LK AI L + +I+   G    ++ SE+ S L  + P     L +++RLL       C  K   +G+ E  YGL      L K++     SP   +  D         + SW+   +  L     +   +G+  +E+   +P  N+ FN+ M+  + I    ++  E  + FEGL SLVDVGGG G++   I   +P IK    DLPHV+   P    ++++ GDMF  +P ADA   K + H   D
Sbjct:   34 MILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVL------MESWYYLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKIL--ETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPNADAVFMKWICHDWSD 273          
BLAST of CK937289 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.747e-18
Identity = 74/247 (29.96%), Postives = 112/247 (45.34%), Query Frame = 3
Query:  141 LKCAIGLGIADIIHSHGRA--ITLSELVSALDIQ-PTKTTGLFKLMRLLVHSGCFNKTKVN----GQEEAYGLTAASTLLIKDKP-YCFSPNVSLFLDPCFVGAFQSLSSWFKGTELTL-----WETVHGIKFWEFMYQNPGINQRFNEAMASDTEIMTSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVASLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLDDE 842
            L  AI L + +I+   G    +T  E+ S L  Q P     L ++ RLL        T  +      E  YGL      L+K++     +P   +  D  F      L SW+   +  L     +   HG+  +++   +P  N+ FN AM+  + IM   ++  E    FEGL ++VDVGGG G++  +I   +P IK    DLPHV+   P    ++++ GDMF  IP  DA   K + H   DE
Sbjct:   18 LTAAIELDLLEIMARAGPGAYLTPGEVASQLPTQNPDAPVMLDRIFRLLASYSVLTCTLCDLPEGKVERLYGLAPLCKFLVKNEDGVSLAPLRLIDQDRVF------LESWYYMKDAILEGGIPFHKAHGMTAFDYPGTDPRFNKIFNRAMSDHSTIMMKKIL--ETYNGFEGLKTVVDVGGGTGAILNMIVAKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVNIPNGDAVFMKWICHDWSDE 256          
BLAST of CK937289 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 7.506e-18
Identity = 77/249 (30.92%), Postives = 117/249 (46.99%), Query Frame = 3
Query:  135 MSLKCAIGLGIADIIHSHG--RAITLSELVSALDIQ-PTKTTGLFKLMRLLVHSGCFN---KTKVNGQ-EEAYGLTAASTLLIKDKP-YCFSPNVSLFLDPCFVGAFQSLSSWFKGTELTL-----WETVHGIKFWEFMYQNPGINQRFNEAMASDTEIMTSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVASLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLDDE 842
            M LK A+ L + +I+   G   AI+ SEL + L  + P     L +++RLL      N   +T  +G+ E  Y L     LL K+      +P + +  D         + SW+  T+  L     +   +G+  +E+   +P  N+ FN  M SD   MT   +  + K  FEGL S+VDVGGG G+   +I   +P IK    DL HV+   P    ++++  DMF  +P ADA   K + H   DE
Sbjct:   30 MVLKSALELDLLEIMAKAGPGAAISPSELAAQLPTKNPEAPVMLDRMLRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKLLTKNADGVSVAPLLLMNQDKVL------MESWYHLTDAVLDGGVPFNKAYGMTAFEYHGTDPRFNKVFNRGM-SDHSTMTMKKILEDYKG-FEGLNSIVDVGGGTGATVNMIVSKYPSIKGINFDLSHVIEDAPAYPGVEHVGRDMFVSVPKADAIFMKWICHDWSDE 270          
BLAST of CK937289 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.184e-17
Identity = 68/248 (27.42%), Postives = 114/248 (45.97%), Query Frame = 3
Query:  135 MSLKCAIGLGIADIIHSHGRAITLSELVSALDIQPTKTTG---LFKLMRLLVHSG---CFNKTKVNGQ-EEAYGLTAASTLLIKDKPYCFSPNVSLFLDPCFVGAFQSLSSWFKGTELTL-----WETVHGIKFWEFMYQNPGINQRFNEAMASDTEIMTSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVASLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLDDE 842
            M LK AI L + ++I   G    +S +  A  +  T       L +++RLL       C  KT  +G  E  YGL      L K++       ++L      +     + SW+  ++  +     +   +G+  +E+   +P  N+ FN+ M++ + I    ++  E    F+GL ++VDVGGG G+   +I   +P IK    DLPHV+   P    ++++ GDMF  +P  DA   K + H   DE
Sbjct:   32 MVLKSAIELDLLELIKKSGAGAFVSPVDLAAQLPTTNPDAHVMLDRILRLLTSYAILECRLKTLPDGGVERLYGLAPVCKFLTKNEDGVSMAPLTLMNQDKVL-----MESWYHLSDAVVDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKIL--ETYTGFDGLKTVVDVGGGTGATLNMIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDE 272          
BLAST of CK937289 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGU (Caffeic acid 3-O-methyltransferase OS=Eucalyptus gunnii GN=OMT PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.184e-17
Identity = 68/248 (27.42%), Postives = 114/248 (45.97%), Query Frame = 3
Query:  135 MSLKCAIGLGIADIIHSHGRAITLS--ELVSALDIQ----PTKTTGLFKLMRLLVHSGCFNKTKVNGQ-EEAYGLTAASTLLIKDKPYCFSPNVSLFLDPCFVGAFQSLSSWFKGTELTL-----WETVHGIKFWEFMYQNPGINQRFNEAMASDTEIMTSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVASLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLDDE 842
            M LK AI L + +I+   G    LS  E+ + L  Q    P     +F+L+       C  +   +G+ E  YGL      L+K++       ++L      +     + SW+   +  L     +   +G+  +E+   +P  N+ FN  M+  + I    ++  E  + FEGL ++VDVGGG G++  +I   +P +K    DLPHV+   P    +K++ GDMF  +P  DA   K + H   D+
Sbjct:   35 MVLKAAIELDLLEIMAKAGPGAFLSPGEVAAQLPTQNPEAPVMLDRIFRLLASYSVLTCTLRNLPDGKVERLYGLAPVCKFLVKNEDGVSIAALNLMNQDKIL-----MESWYYLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKIFNRGMSDHSTITMKKIL--ETYKGFEGLETVVDVGGGTGAVLSMIVAKYPSMKGINFDLPHVIEDAPPLPGVKHVGGDMFVSVPKGDAIFMKWICHDWSDD 275          
BLAST of CK937289 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.852e-17
Identity = 70/249 (28.11%), Postives = 112/249 (44.98%), Query Frame = 3
Query:  135 MSLKCAIGLGIADIIHSHGRA--ITLSELVSALDIQ----PTKTTGLFKLMRLLVHSGCFNKTKVNGQ-EEAYGLTAASTLLIKDKP-YCFSPNVSLFLDPCFVGAFQSLSSWFKGTELTL-----WETVHGIKFWEFMYQNPGINQRFNEAMASDTEIMTSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVASLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLDDE 842
            M LK  + L + +I+   G    I+ SEL + L  +    P     +F+L+       C  +T  +G+ E  Y L      L K+      +P + +  D         + SW+  T+  L     +   +G+  +E+   +P  N+ FN  M+  T +    ++  E    FEGL S+VDVGGG G+   +I   +P IK    DLPHV+   P    ++ + GDMF  +P ADA   K + H   D+
Sbjct:   30 MVLKATVELDLLEIMAKSGPGAFISPSELAAQLPTKNPEAPVMLDRMFRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKFLTKNGDGVSIAPILLMNQDKVL------MESWYHLTDAVLDGGVPFNKAYGMTTFEYHGTDPRFNKVFNCGMSDHTTLSMKKIL--EDYTGFEGLNSIVDVGGGTGATVNMIVSKYPSIKGINFDLPHVIRDAPSYPGVEQVGGDMFVSVPKADAIFMKWICHDWSDD 270          
BLAST of CK937289 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.865e-17
Identity = 70/249 (28.11%), Postives = 113/249 (45.38%), Query Frame = 3
Query:  135 MSLKCAIGLGIADIIHSHGRA--ITLSELVSALDIQ-PTKTTGLFKLMRLLVHSGCF----NKTKVNGQEEAYGLTAASTLLIKDKP-YCFSPNVSLFLDPCFVGAFQSLSSWFKGTELTL-----WETVHGIKFWEFMYQNPGINQRFNEAMASDTEIMTSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVASLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLDDE 842
            M LK AI L + ++I   G    ++ SEL + L    P     L +++RLL          N     G E  YGL      L K+      +P + +  D         + SW+   +  L     +   +G+  +E+   +P  N+ FN+ M++ + I    ++  E  + FEGL ++VDVGGG G+   +I   +P IK    +LPHVV   P    ++++ GDMF  +P  DA   K + H   D+
Sbjct:   21 MVLKSAIELDLLELIAKAGPGAYVSPSELAAQLPTHNPEAPIMLDRILRLLATYSVLDCKLNNLADGGVERLYGLAPVCKFLTKNADGVSMAPLLLMNQDKVL------MESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKIL--EVYRGFEGLKTVVDVGGGTGATLNMIISKYPTIKGINFELPHVVEDAPSHSGVEHVGGDMFVSVPKGDAIFMKWICHDWSDD 261          
BLAST of CK937289 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.849e-16
Identity = 68/247 (27.53%), Postives = 111/247 (44.94%), Query Frame = 3
Query:  135 MSLKCAIGLGIADIIHSHGRAITLSELVSALDIQPTKTTG---LFKLMRLLVHSG---CFNKTKVNGQ-EEAYGLTAASTLLIKDKPYCFSPNVSLFLDPCFVGAFQSLSSWFKGTELTL-----WETVHGIKFWEFMYQNPGINQRFNEAMASDTEIMTSFVVKAECKQIFEGLGSLVDVGGGNGSLSRIISEAFPGIKCTVLDLPHVVASLPEADNLKYIAGDMFQFIPPADAFLFKLVFHGLDD 839
            M LK AI L + ++I   G    +S    A  +  T       L +++RLL       C  KT  +G  +  YGL      L K++       ++L      +     + SW+   +  L     +   +G+  +E+   +P  N+ FN+ M++ + I    ++  E    F+GL ++VDVGGG G+   +I   +P IK    DLPHVV   P    ++++ GDMF  +P  DA   K + H   D
Sbjct:   32 MVLKSAIELDLLELIKKAGAGAFVSPAELAAQLLTTNAEAHVMLDRILRLLTSYAILECRLKTLPDGGVQRLYGLAPVCKFLTKNEDGVSMAPLALMNQDKVL-----MESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKIL--ETYTGFDGLKTVVDVGGGTGATLNMIISKYPSIKGINFDLPHVVEDAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSD 271          
The following BLAST results are available for this feature:
BLAST of CK937289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
COMT1_POPTM4.400e-1830.24Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_ROSCH5.747e-1830.12Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_POPKI5.747e-1830.24Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT1_EUCGL5.747e-1829.96Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
COMT1_CAPAN7.506e-1830.92Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_OCIBA2.184e-1727.42Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT1_EUCGU2.184e-1727.42Caffeic acid 3-O-methyltransferase OS=Eucalyptus g... [more]
COMT1_CAPCH2.852e-1728.11Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
COMT1_COFCA4.865e-1728.11Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT2_OCIBA1.849e-1627.53Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004512_A01 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIIF_A01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937289 ID=CK937289; Name=CK937289; organism=Citrus sinensis; type=EST; length=851bp
GGGGGTGATCAATCAGGCAAGCTTAATTTAATTGATCATCAGTATCTATG
GATGCGAATCAAGATCAAGGAGCGAAAGAGTTGTTTCAAGGCCAAGCTCA
ACTGTATAAGCTCATGTTTAATCATTTAAGCTCGATGTCACTCAAGTGCG
CGATTGGGCTAGGCATAGCGGATATAATTCACAGCCACGGACGGGCCATC
ACTCTTTCTGAGTTGGTTTCGGCACTTGATATTCAGCCTACAAAAACGAC
TGGCTTATTCAAGCTCATGCGCTTGTTAGTTCACTCGGGCTGCTTTAACA
AAACCAAAGTCAATGGACAAGAAGAAGCATACGGGCTCACAGCTGCTTCT
ACTCTGCTCATCAAAGATAAGCCCTACTGTTTTTCACCAAATGTTTCATT
ATTTCTTGACCCATGTTTTGTCGGAGCATTTCAGTCTTTAAGTAGTTGGT
TCAAAGGGACTGAGCTCACGTTGTGGGAAACTGTTCATGGAATCAAGTTC
TGGGAATTTATGTATCAAAACCCTGGAATAAACCAGCGGTTCAATGAAGC
AATGGCCAGTGACACTGAAATAATGACAAGCTTTGTTGTCAAAGCCGAGT
GCAAGCAAATCTTTGAAGGGTTGGGCTCATTGGTTGACGTAGGAGGTGGC
AACGGATCGCTTTCCAGAATCATCTCTGAAGCATTCCCTGGCATCAAATG
CACTGTACTCGACCTCCCGCATGTTGTTGCTAGCCTGCCTGAGGCCGACA
ACTTGAAATACATAGCAGGTGACATGTTTCAGTTTATCCCTCCTGCAGAT
GCCTTTCTCTTCAAGTTGGTTTTTCATGGATTAGATGATGAGGATGGGTT
G
back to top