CK937280

Overview
NameCK937280
Unique NameCK937280
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length600
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_CERBE (Maturase K OS=Cercocarpus betuloides GN=matK PE=3 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 1.906e-76
Identity = 142/199 (71.36%), Postives = 162/199 (81.41%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVE-VFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            NQSSHLQ TS  +  ER +FY K+++ VE VFA DF  IL   KDPFMHYVRYQGKSILASKDTPLLMNKWKYYLV LWQ HF+  SQPGR+ +N L   K++++FLGYLS +R N  +VRSQMLENSF++DN+ KK DT VPII LIGSL K +FCNALGHPISKSTW+D SD  +IDRFVRICRNLSHYYSGSSKKK
Sbjct:  225 NQSSHLQFTSSWIFFERIHFYEKIKYPVEEVFANDFPAILWFFKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVNLWQCHFYVWSQPGRIYINQL--SKHSLDFLGYLSSIRPNLSVVRSQMLENSFIMDNARKKFDTLVPIIPLIGSLAKVKFCNALGHPISKSTWADSSDFDIIDRFVRICRNLSHYYSGSSKKK 421          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_OENPA (Maturase K OS=Oenothera parviflora GN=matK PE=3 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 3.251e-76
Identity = 142/199 (71.36%), Postives = 164/199 (82.41%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVEVFA-KDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            NQSSH QSTS  V  ER  FY K++HLVEVF   DF DI    KDP MHYVRYQGKSILASKDTPLLMNKWKYYLV LWQ+HF   SQPGR+ +N L  GKY+++FLGY S V+L S +VR+Q LENSFLI+N+MKK++TTVPI+ LIGSL++A+FCNALGHPISK T +D SDS +IDRFVRICRNLSHY+SGSSKKK
Sbjct:  230 NQSSHFQSTSSGVFFERILFYVKIDHLVEVFVGTDFLDIRSFFKDPNMHYVRYQGKSILASKDTPLLMNKWKYYLVNLWQYHFSVWSQPGRININQL--GKYSLDFLGYFSNVQLKSSVVRNQTLENSFLINNAMKKLETTVPILPLIGSLSRAKFCNALGHPISKPTRTDSSDSDIIDRFVRICRNLSHYHSGSSKKK 426          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_OENGL (Maturase K OS=Oenothera glazioviana GN=matK PE=3 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 3.251e-76
Identity = 142/199 (71.36%), Postives = 164/199 (82.41%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVEVFA-KDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            NQSSH QSTS  V  ER  FY K++HLVEVF   DF DI    KDP MHYVRYQGKSILASKDTPLLMNKWKYYLV LWQ+HF   SQPGR+ +N L  GKY+++FLGY S V+L S +VR+Q LENSFLI+N+MKK++TTVPI+ LIGSL++A+FCNALGHPISK T +D SDS +IDRFVRICRNLSHY+SGSSKKK
Sbjct:  230 NQSSHFQSTSSGVFFERILFYVKIDHLVEVFVGTDFLDIRSFFKDPNMHYVRYQGKSILASKDTPLLMNKWKYYLVNLWQYHFSVWSQPGRININQL--GKYSLDFLGYFSNVQLKSSVVRNQTLENSFLINNAMKKLETTVPILPLIGSLSRAKFCNALGHPISKPTRTDSSDSDIIDRFVRICRNLSHYHSGSSKKK 426          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_OENEH (Maturase K OS=Oenothera elata subsp. hookeri GN=matK PE=3 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 3.251e-76
Identity = 142/199 (71.36%), Postives = 164/199 (82.41%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVEVFA-KDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            NQSSH QSTS  V  ER  FY K++HLVEVF   DF DI    KDP MHYVRYQGKSILASKDTPLLMNKWKYYLV LWQ+HF   SQPGR+ +N L  GKY+++FLGY S V+L S +VR+Q LENSFLI+N+MKK++TTVPI+ LIGSL++A+FCNALGHPISK T +D SDS +IDRFVRICRNLSHY+SGSSKKK
Sbjct:  230 NQSSHFQSTSSGVFFERILFYVKIDHLVEVFVGTDFLDIRSFFKDPNMHYVRYQGKSILASKDTPLLMNKWKYYLVNLWQYHFSVWSQPGRININQL--GKYSLDFLGYFSNVQLKSSVVRNQTLENSFLINNAMKKLETTVPILPLIGSLSRAKFCNALGHPISKPTRNDSSDSDIIDRFVRICRNLSHYHSGSSKKK 426          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_OENBI (Maturase K OS=Oenothera biennis GN=matK PE=3 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 3.251e-76
Identity = 142/199 (71.36%), Postives = 164/199 (82.41%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVEVFA-KDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            NQSSH QSTS  V  ER  FY K++HLVEVF   DF DI    KDP MHYVRYQGKSILASKDTPLLMNKWKYYLV LWQ+HF   SQPGR+ +N L  GKY+++FLGY S V+L S +VR+Q LENSFLI+N+MKK++TTVPI+ LIGSL++A+FCNALGHPISK T +D SDS +IDRFVRICRNLSHY+SGSSKKK
Sbjct:  230 NQSSHFQSTSSGVFFERILFYVKIDHLVEVFVGTDFLDIRSFFKDPNMHYVRYQGKSILASKDTPLLMNKWKYYLVNLWQYHFSVWSQPGRININQL--GKYSLDFLGYFSNVQLKSSVVRNQTLENSFLINNAMKKLETTVPILPLIGSLSRAKFCNALGHPISKPTRNDSSDSDIIDRFVRICRNLSHYHSGSSKKK 426          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_OENAR (Maturase K OS=Oenothera argillicola GN=matK PE=3 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 3.251e-76
Identity = 142/199 (71.36%), Postives = 164/199 (82.41%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVEVFA-KDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            NQSSH QSTS  V  ER  FY K++HLVEVF   DF DI    KDP MHYVRYQGKSILASKDTPLLMNKWKYYLV LWQ+HF   SQPGR+ +N L  GKY+++FLGY S V+L S +VR+Q LENSFLI+N+MKK++TTVPI+ LIGSL++A+FCNALGHPISK T +D SDS +IDRFVRICRNLSHY+SGSSKKK
Sbjct:  230 NQSSHFQSTSSGVFFERILFYVKIDHLVEVFVGTDFLDIRSFFKDPNMHYVRYQGKSILASKDTPLLMNKWKYYLVNLWQYHFSVWSQPGRININQL--GKYSLDFLGYFSNVQLKSSVVRNQTLENSFLINNAMKKLETTVPILPLIGSLSRAKFCNALGHPISKPTRTDSSDSDIIDRFVRICRNLSHYHSGSSKKK 426          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_MENLA (Maturase K OS=Mentzelia laevicaulis GN=matK PE=3 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 5.545e-76
Identity = 139/197 (70.56%), Postives = 161/197 (81.73%), Query Frame = 3
Query:    9 QSSHLQSTSFQVLVERTYFYGKVEHLVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            QSSHL+STS   L+ER YFYGK+EH VEVFAKDFQ IL L KDPF+HY+RYQGKSILASK T LLMNKWKYYL+  WQ HF+  SQP R+ +N L    ++++FLGYLS VRLN  +VRSQM+ENSFLIDN++KK DT VPII +I SL KA+FCN LGHPISK  W+D SDS +IDRF RICRNLSHY+SGSSKKK
Sbjct:  226 QSSHLRSTSSGALLERIYFYGKLEHSVEVFAKDFQAILWLFKDPFIHYLRYQGKSILASKGTSLLMNKWKYYLLNCWQCHFYVWSQPRRIYINQL--SNHSLDFLGYLSSVRLNPSMVRSQMIENSFLIDNAIKKFDTIVPIIPMIQSLAKAKFCNVLGHPISKPVWADLSDSDIIDRFGRICRNLSHYHSGSSKKK 420          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_BACCT (Maturase K OS=Backhousia citriodora GN=matK PE=3 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 5.545e-76
Identity = 143/199 (71.86%), Postives = 164/199 (82.41%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVEVFA-KDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            N+SSHL+STS  +  ER YFY K+EH V+VF   DFQ IL   KDPFMHYVRYQGKSILASKDTPLLMNKWKYYLV LWQ+HF+A  QPGR+ +N L   KY+++FLGY S VRLNS +VRSQMLEN FLI+N+MKK +T VPII LIGSL+KA FCN LGHPISK T SD SDS +I+RF+RICRNLSHY+SGSSKKK
Sbjct:  225 NKSSHLRSTSSGIFFERIYFYVKIEHFVKVFFDNDFQCILWFFKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVNLWQYHFYAWFQPGRININQLC--KYSLDFLGYRSSVRLNSSVVRSQMLENLFLINNAMKKFETIVPIIPLIGSLSKANFCNTLGHPISKPTRSDSSDSDIINRFLRICRNLSHYHSGSSKKK 421          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_NICDE (Maturase K OS=Nicotiana debneyi GN=matK PE=3 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 7.242e-76
Identity = 142/198 (71.72%), Postives = 156/198 (78.79%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            NQSSHL+STSF  L+ER YFYGK+E LVEVFAKDFQ  L L KDPFMHYVRYQGKSILASK T LLMNKWK+YLV  WQ HF      GR+ +N L    ++ NF+GYLS VRLN  +VRSQMLENSFLI+N++KK DT VPII LIGSL KA FC  LGHPISK  WSD SDS +IDRF RICRNL HYYSGSSKKK
Sbjct:  232 NQSSHLRSTSFGALLERIYFYGKIERLVEVFAKDFQVTLWLFKDPFMHYVRYQGKSILASKGTFLLMNKWKFYLVNFWQCHFSLCFHTGRIHINQL--SNHSRNFMGYLSSVRLNPSMVRSQMLENSFLINNAIKKFDTLVPIIPLIGSLAKANFCTVLGHPISKPVWSDLSDSDIIDRFGRICRNLFHYYSGSSKKK 427          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_NICBE (Maturase K OS=Nicotiana benthamiana GN=matK PE=3 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 7.242e-76
Identity = 142/198 (71.72%), Postives = 156/198 (78.79%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            NQSSHL+STSF  L+ER YFYGK+E LVEVFAKDFQ  L L KDPFMHYVRYQGKSILASK T LLMNKWK+YLV  WQ HF      GR+ +N L    ++ NF+GYLS VRLN  +VRSQMLENSFLI+N++KK DT VPII LIGSL KA FC  LGHPISK  WSD SDS +IDRF RICRNL HYYSGSSKKK
Sbjct:  232 NQSSHLRSTSFGALLERIYFYGKIERLVEVFAKDFQVTLWLFKDPFMHYVRYQGKSILASKGTFLLMNKWKFYLVNFWQCHFSLCFHTGRIHINQL--SNHSRNFMGYLSSVRLNPSMVRSQMLENSFLINNAIKKFDTLVPIIPLIGSLAKANFCTVLGHPISKPVWSDLSDSDIIDRFGRICRNLFHYYSGSSKKK 427          
The following BLAST results are available for this feature:
BLAST of CK937280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MATK_CERBE1.906e-7671.36Maturase K OS=Cercocarpus betuloides GN=matK PE=3 ... [more]
MATK_OENPA3.251e-7671.36Maturase K OS=Oenothera parviflora GN=matK PE=3 SV... [more]
MATK_OENGL3.251e-7671.36Maturase K OS=Oenothera glazioviana GN=matK PE=3 S... [more]
MATK_OENEH3.251e-7671.36Maturase K OS=Oenothera elata subsp. hookeri GN=ma... [more]
MATK_OENBI3.251e-7671.36Maturase K OS=Oenothera biennis GN=matK PE=3 SV=1[more]
MATK_OENAR3.251e-7671.36Maturase K OS=Oenothera argillicola GN=matK PE=3 S... [more]
MATK_MENLA5.545e-7670.56Maturase K OS=Mentzelia laevicaulis GN=matK PE=3 S... [more]
MATK_BACCT5.545e-7671.86Maturase K OS=Backhousia citriodora GN=matK PE=3 S... [more]
MATK_NICDE7.242e-7671.72Maturase K OS=Nicotiana debneyi GN=matK PE=3 SV=1[more]
MATK_NICBE7.242e-7671.72Maturase K OS=Nicotiana benthamiana GN=matK PE=3 S... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004512_A12 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIIF_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937280 ID=CK937280; Name=CK937280; organism=Citrus sinensis; type=EST; length=600bp
GGGGTAACCAATCGTCTCATTTACAATCAACATCCTTTCAAGTCCTCGTT
GAGCGAACGTATTTCTATGGAAAAGTCGAACATCTTGTCGAAGTCTTTGC
TAAAGATTTTCAGGACATCTTAGGGTTGGTCAAGGATCCTTTCATGCATT
ATGTTAGATATCAAGGAAAATCCATTTTGGCTTCAAAGGATACGCCTCTT
CTGATGAATAAATGGAAATATTACCTTGTCGGTTTATGGCAATGGCATTT
TCACGCGTCTTCTCAACCAGGAAGGGTTCAGCTAAACCACTTATACTTAG
GCAAGTACGCTATTAACTTTCTGGGCTATCTTTCCGGTGTGCGACTAAAT
TCTTTGTTGGTACGGAGTCAAATGCTAGAAAATTCATTTCTAATAGATAA
TTCTATGAAGAAGGTCGATACGACCGTTCCAATTATTCATCTGATTGGAT
CATTGACTAAGGCGCGGTTTTGTAACGCATTAGGGCATCCTATCAGTAAG
TCGACTTGGTCCGATTTCTCTGATTCTCATCTTATCGACCGATTTGTGCG
TATATGTAGAAATCTTTCTCATTATTACAGCGGATCTTCAAAAAAAAAAA
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