CK937280

Overview
NameCK937280
Unique NameCK937280
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length600
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_MENLI (Maturase K OS=Mentzelia lindleyi GN=matK PE=3 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 9.459e-76
Identity = 139/197 (70.56%), Postives = 161/197 (81.73%), Query Frame = 3
Query:    9 QSSHLQSTSFQVLVERTYFYGKVEHLVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            QSSHL+STS  VL+ER YFYGK+EH VEV AKDF+ IL L KDPF+HY+RYQGKSIL SK T LLMNKWKYYL+  WQ HF+  SQP R+ +N L    ++++FLGYLS VRLN  +VRSQMLENSFLIDN++KK DT VPII +IGSL KA+FCN LGHPISK  W+D SDS +IDRF RICRNLSHY+SGSSKKK
Sbjct:  228 QSSHLRSTSSGVLLERIYFYGKLEHSVEVCAKDFKAILWLFKDPFIHYLRYQGKSILTSKGTSLLMNKWKYYLLNCWQCHFYVWSQPRRIYINQL--SNHSLDFLGYLSSVRLNPSMVRSQMLENSFLIDNAIKKFDTIVPIIPMIGSLAKAKFCNVLGHPISKPVWADLSDSDIIDRFGRICRNLSHYHSGSSKKK 422          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_SYZSA (Maturase K OS=Syzygium samarangense GN=matK PE=3 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 1.235e-75
Identity = 143/199 (71.86%), Postives = 163/199 (81.91%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVEVFA-KDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            NQSSHL+STS  +  ER YFY K+EH  +VF   DFQ IL   KDPFMHYVRYQGKSILASKDTPLLMNKWKYYLV LWQ+HF+A  QP R+ +N L   KY+++FLGY S VRLNS +VRSQMLENSFLI+N+MKK +T VPII LIGSL+KA FCN LGHPISK T +D SDS +IDRF+RICRNLSHY+SGSSKKK
Sbjct:  225 NQSSHLRSTSSGIFFERIYFYVKIEHFAKVFFDNDFQCILWFFKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVTLWQYHFYAWFQPVRIDINQLC--KYSLDFLGYRSSVRLNSSVVRSQMLENSFLINNAMKKFETIVPIIPLIGSLSKANFCNTLGHPISKPTRADSSDSDIIDRFLRICRNLSHYHSGSSKKK 421          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_NICGL (Maturase K OS=Nicotiana glauca GN=matK PE=3 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 1.235e-75
Identity = 141/198 (71.21%), Postives = 156/198 (78.79%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            NQSSHL+STSF  L+ER YFYGK+E LVEVFAKDFQ  L L KDPFMHYVRYQGKSILASK T LLMNKWK+YLV  WQ HF      GR+ +N L    ++ NF+GYLS VRLN  +VRSQMLENSFLI+N++KK DT VP+I LIGSL KA FC  LGHPISK  WSD SDS +IDRF RICRNL HYYSGSSKKK
Sbjct:  232 NQSSHLRSTSFGALLERIYFYGKIERLVEVFAKDFQITLWLFKDPFMHYVRYQGKSILASKGTFLLMNKWKFYLVNFWQCHFSLCFHTGRIHINQL--SNHSRNFMGYLSSVRLNPSMVRSQMLENSFLINNAIKKFDTLVPLIPLIGSLAKANFCTVLGHPISKPVWSDLSDSDIIDRFGRICRNLFHYYSGSSKKK 427          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_ANEAN (Maturase K OS=Anetholea anisata GN=matK PE=3 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 1.613e-75
Identity = 142/199 (71.36%), Postives = 163/199 (81.91%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVEVFA-KDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            NQSSHL+STS  +  ER YFY K+EH  +VF   DFQ IL   KDPFMHYVRYQGKSILA KDTPLLMNKWKYYLV LWQ+HF+A  QPGR+ +N L   KY+++FLGY S VRLNS +VRSQ+LENSFLI+N+MKK +T VPII LIGSL+KA FCN LGHPISK T +D SDS +IDRF+RICRNLSHY+SGSSKKK
Sbjct:  225 NQSSHLRSTSSGIFFERIYFYVKIEHFAKVFFDNDFQCILWFFKDPFMHYVRYQGKSILALKDTPLLMNKWKYYLVTLWQYHFYAWFQPGRIDINQLC--KYSLDFLGYRSSVRLNSSVVRSQILENSFLINNAMKKFETIVPIIPLIGSLSKANFCNTLGHPISKPTRADSSDSDIIDRFLRICRNLSHYHSGSSKKK 421          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_SYZCU (Maturase K OS=Syzygium cumini GN=matK PE=3 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 2.107e-75
Identity = 142/199 (71.36%), Postives = 162/199 (81.41%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVEVFA-KDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            NQSSHL+STS  +  ER YFY K+EH  +VF   DFQ IL   KDPFMHYVRYQGKSIL SKDTPLLMNKWKYYLV LWQ+HF+A  QPGR+ +N L   KY+++FLGY S V LNS +VRSQMLENSFLI+N+MKK +T VPII LIGSL+KA FCN LGHPISK T +D SDS +IDRF+RICRNLSHY+SGSSKKK
Sbjct:  227 NQSSHLRSTSSGIFFERIYFYVKIEHFAKVFFDNDFQCILWFFKDPFMHYVRYQGKSILGSKDTPLLMNKWKYYLVTLWQYHFYAWFQPGRIDINQLC--KYSLDFLGYRSSVPLNSSVVRSQMLENSFLINNAMKKFETIVPIIPLIGSLSKANFCNTLGHPISKPTRADSSDSDIIDRFLRICRNLSHYHSGSSKKK 423          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_GOSTU (Maturase K OS=Gossypium turneri GN=matK PE=3 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 2.107e-75
Identity = 137/198 (69.19%), Postives = 166/198 (83.84%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            NQSSHL+STS  V +ER +FYGK+++L EVF  DFQ+ L L KDPF+H++RYQGKSILASKDT LL+NKWKYY V LWQ++F+  SQ GRV++N L   KY+++FLGYLS VRLN  +VRSQMLENSFLIDN++K +DT +PII LIGSL+KA+FCN LGHPISK TW+D  DS +IDRFVRI RNLSHY+SGSSKKK
Sbjct:  225 NQSSHLRSTSSGVFLERIFFYGKIKYLGEVFYNDFQNNLWLFKDPFIHFIRYQGKSILASKDTSLLINKWKYYFVDLWQYYFYLWSQSGRVRINQL--SKYSLDFLGYLSSVRLNPSVVRSQMLENSFLIDNAVKTLDTRIPIISLIGSLSKAKFCNTLGHPISKPTWADSPDSDIIDRFVRISRNLSHYHSGSSKKK 420          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_GOSHI (Maturase K OS=Gossypium hirsutum GN=matK PE=3 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 2.107e-75
Identity = 137/198 (69.19%), Postives = 166/198 (83.84%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            NQSSHL+STS  V +ER +FYGK+++L EVF  DFQ+ L L KDPF+H++RYQGKSILASKDT LL+NKWKYY V LWQ++F+  SQ GRV++N L   KY+++FLGYLS VRLN  +VRSQMLENSFLIDN++K +DT +PII LIGSL+KA+FCN LGHPISK TW+D  DS +IDRFVRI RNLSHY+SGSSKKK
Sbjct:  225 NQSSHLRSTSSGVFLERIFFYGKIKYLGEVFYNDFQNNLWLFKDPFIHFIRYQGKSILASKDTSLLINKWKYYFVDLWQYYFYLWSQSGRVRINQL--SKYSLDFLGYLSSVRLNPSVVRSQMLENSFLIDNAVKTLDTRIPIISLIGSLSKAKFCNTLGHPISKPTWADSPDSDIIDRFVRISRNLSHYHSGSSKKK 420          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_CHIAL (Maturase K OS=Chiococca alba GN=matK PE=3 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 2.107e-75
Identity = 139/198 (70.20%), Postives = 160/198 (80.81%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            NQSSHL+STSF V +ER YFYGK+E LVEVFAKDF+  L L KDPFMHYVRYQGKSIL SK TPLLMNKWKYYLV  WQ +F      GRV +N L    +++NF+GYLS VRLN  +VRSQMLENSFLI+N++KK+DT VPI+ LIGSL KA+FCN LGHPISK  W+  SDS +IDRF +ICRNLSHY+SGSSKKK
Sbjct:  228 NQSSHLRSTSFGVFLERIYFYGKIERLVEVFAKDFRASLWLFKDPFMHYVRYQGKSILVSKGTPLLMNKWKYYLVNFWQSYFDLWVHSGRVYINQL--PNHSLNFIGYLSSVRLNPSMVRSQMLENSFLINNAIKKLDTLVPIVPLIGSLAKAKFCNLLGHPISKPAWAGLSDSDIIDRFGQICRNLSHYHSGSSKKK 423          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_NICTO (Maturase K OS=Nicotiana tomentosiformis GN=matK PE=3 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 2.752e-75
Identity = 140/198 (70.71%), Postives = 157/198 (79.29%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            NQSSHL+STSF  L+ER YFYGK+E L+EVFAKDFQ  L L KDPFMHYVRYQGKSILASK T LLMNKWK+YLV  WQ HF      GR+ +N L    ++ +F+GYLS VRLNS +VRSQMLENSFLI+N++KK DT VPII LIGSL KA FC  LGHPISK  WSD SDS +IDRF RIC+NL HYYSGSSKKK
Sbjct:  232 NQSSHLRSTSFGALLERIYFYGKIERLIEVFAKDFQVTLCLFKDPFMHYVRYQGKSILASKGTFLLMNKWKFYLVNFWQCHFSLCFHTGRIHINQL--SNHSRDFMGYLSSVRLNSSMVRSQMLENSFLINNAIKKFDTLVPIIPLIGSLAKANFCTVLGHPISKPVWSDLSDSDIIDRFGRICKNLFHYYSGSSKKK 427          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_NICPL (Maturase K OS=Nicotiana plumbaginifolia GN=matK PE=3 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 2.752e-75
Identity = 141/198 (71.21%), Postives = 156/198 (78.79%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            NQSSHL+STSF  L+ER YFYGK+E LVEVFAKDFQ  L L KDPFMHYVRYQGKSILASK T LLMNKWK+YLV  WQ HF      GR+ +N L    ++ +F+GYLS VRLN  +VRSQMLENSFLI+N++KK DT VPII LIGSL KA FC  LGHPISK  WSD SDS +IDRF RICRNL HYYSGSSKKK
Sbjct:  232 NQSSHLRSTSFGALLERIYFYGKIERLVEVFAKDFQVTLWLFKDPFMHYVRYQGKSILASKGTFLLMNKWKFYLVNFWQCHFSLCFHTGRIHINQL--SNHSRDFMGYLSSVRLNPSMVRSQMLENSFLINNAIKKFDTLVPIIPLIGSLAKANFCTVLGHPISKPVWSDLSDSDIIDRFGRICRNLFHYYSGSSKKK 427          
The following BLAST results are available for this feature:
BLAST of CK937280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MATK_MENLI9.459e-7670.56Maturase K OS=Mentzelia lindleyi GN=matK PE=3 SV=1[more]
MATK_SYZSA1.235e-7571.86Maturase K OS=Syzygium samarangense GN=matK PE=3 S... [more]
MATK_NICGL1.235e-7571.21Maturase K OS=Nicotiana glauca GN=matK PE=3 SV=1[more]
MATK_ANEAN1.613e-7571.36Maturase K OS=Anetholea anisata GN=matK PE=3 SV=1[more]
MATK_SYZCU2.107e-7571.36Maturase K OS=Syzygium cumini GN=matK PE=3 SV=1[more]
MATK_GOSTU2.107e-7569.19Maturase K OS=Gossypium turneri GN=matK PE=3 SV=1[more]
MATK_GOSHI2.107e-7569.19Maturase K OS=Gossypium hirsutum GN=matK PE=3 SV=1[more]
MATK_CHIAL2.107e-7570.20Maturase K OS=Chiococca alba GN=matK PE=3 SV=1[more]
MATK_NICTO2.752e-7570.71Maturase K OS=Nicotiana tomentosiformis GN=matK PE... [more]
MATK_NICPL2.752e-7571.21Maturase K OS=Nicotiana plumbaginifolia GN=matK PE... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004512_A12 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIIF_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937280 ID=CK937280; Name=CK937280; organism=Citrus sinensis; type=EST; length=600bp
GGGGTAACCAATCGTCTCATTTACAATCAACATCCTTTCAAGTCCTCGTT
GAGCGAACGTATTTCTATGGAAAAGTCGAACATCTTGTCGAAGTCTTTGC
TAAAGATTTTCAGGACATCTTAGGGTTGGTCAAGGATCCTTTCATGCATT
ATGTTAGATATCAAGGAAAATCCATTTTGGCTTCAAAGGATACGCCTCTT
CTGATGAATAAATGGAAATATTACCTTGTCGGTTTATGGCAATGGCATTT
TCACGCGTCTTCTCAACCAGGAAGGGTTCAGCTAAACCACTTATACTTAG
GCAAGTACGCTATTAACTTTCTGGGCTATCTTTCCGGTGTGCGACTAAAT
TCTTTGTTGGTACGGAGTCAAATGCTAGAAAATTCATTTCTAATAGATAA
TTCTATGAAGAAGGTCGATACGACCGTTCCAATTATTCATCTGATTGGAT
CATTGACTAAGGCGCGGTTTTGTAACGCATTAGGGCATCCTATCAGTAAG
TCGACTTGGTCCGATTTCTCTGATTCTCATCTTATCGACCGATTTGTGCG
TATATGTAGAAATCTTTCTCATTATTACAGCGGATCTTCAAAAAAAAAAA
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