CK937280

Overview
NameCK937280
Unique NameCK937280
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length600
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_KNIUV (Maturase K OS=Kniphofia uvaria GN=matK PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 1.981e-57
Identity = 115/202 (56.93%), Postives = 141/202 (69.80%), Query Frame = 3
Query:    9 QSSHLQSTSFQVLVERTYFYGKVEHL-VEVF----AKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            QS +L+ TS    +ERT+FY K+EHL +E F       F       K+PFMHYVRYQ K+ILAS+ T  LM KWKY+ V  WQ++FH  S+P R+ +NHL    Y+  FLGYLS + +NS  VR+QMLENSFLID    K DT VP+I LI SL+KA+FC   GHPISK  W+D SDS +IDRF RICRNLSHY+SGSSKK+
Sbjct:  236 QSYYLRLTSSGTFLERTHFYRKIEHLPIEHFFVVCRNYFHRTRWFFKNPFMHYVRYQRKAILASRGTHFLMKKWKYHFVNFWQYYFHFWSRPYRIHINHL--SNYSFYFLGYLSSLLINSSAVRNQMLENSFLIDTVTNKFDTIVPVILLIRSLSKAKFCTVSGHPISKPIWADLSDSDIIDRFGRICRNLSHYHSGSSKKQ 435          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_HELBU (Maturase K OS=Helonias bullata GN=matK PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 1.981e-57
Identity = 108/197 (54.82%), Postives = 140/197 (71.07%), Query Frame = 3
Query:    9 QSSHLQSTSFQVLVERTYFYGKVEHLVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            QS +L+ TS +  +ER +FY K+EH + V    FQ  L   KD FMHY+RYQGK+ILAS+ T LL+ KWK YLV  WQ++ +  S+P R+ +N L    Y+  F+GY+S V +N   V++QMLEN FL+D   KK DT VP+I LIGSL+KA+FC   GHPISK  W+D SDS +I+RF RICRNLSHY+SGSSKK+
Sbjct:  235 QSYNLRPTSSRAFLERIHFYVKIEHFIIVCHNYFQKTLRFFKDSFMHYIRYQGKAILASRGTYLLIKKWKCYLVNFWQYYLYFWSKPYRIHINQL--SNYSFYFMGYISSVLINPSAVKNQMLENLFLVDTVTKKFDTIVPVIPLIGSLSKAKFCTVAGHPISKPVWADLSDSDIIERFGRICRNLSHYHSGSSKKQ 429          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_ANDPO (Maturase K OS=Andromeda polifolia GN=matK PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 1.981e-57
Identity = 111/197 (56.35%), Postives = 143/197 (72.59%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKK 596
            NQSSHL S SF+  +ER  FY K+E  +EVFAK F+ IL + KDPF+HYVRY+GK ILASK + LLMNKW+YYLV  W+ +F+  +QP R+ +  L   K +++FLGYLS VRL   +VRSQM+ENSFLI+N+ KK+DT VPI  +IGSL+KA+FCN LGHP++K  W   SDS +++R        SHYYS S KK
Sbjct:  231 NQSSHLCSISFETFLERILFYKKIE--LEVFAKHFKAILWVFKDPFLHYVRYRGKFILASKGSSLLMNKWEYYLVNFWKCYFYIWAQPRRIHIKQL--SKNSLDFLGYLSNVRLKPSMVRSQMIENSFLIENAGKKLDTLVPITSMIGSLSKAKFCNVLGHPMNKPVWGGLSDSXIMERIRAXIXKSSHYYSXSLKK 423          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_ARIGL (Maturase K OS=Aristea glauca GN=matK PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 2.588e-57
Identity = 113/200 (56.50%), Postives = 139/200 (69.50%), Query Frame = 3
Query:   12 SSHLQSTSFQVLVERTYFYGKVEH-----LVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKK 596
            SS+L+  SF+  +ER YFYGK+EH     L+ V+   F   L   KDPFMHYVR QGK+IL+SK T LLM KWKY+ V  WQ++FH   Q  R+ +N L     +  FLGYLS +   S  VR+QMLENSFLID  + K DT VP+I LIG+L+KA FC   GHPISK  W+D SDS++I+RF RICRNLSHY+SGSSKK
Sbjct:  241 SSYLRFISFRTFLERRYFYGKMEHRQTEHLIVVYCDYFNGTLWFFKDPFMHYVRCQGKAILSSKGTHLLMKKWKYHFVNFWQYNFHFWYQSYRIHINQL--SNCSFYFLGYLSSLLKKSSTVRNQMLENSFLIDTIITKFDTAVPVIFLIGALSKAPFCTVSGHPISKPIWTDLSDSYIIERFGRICRNLSHYHSGSSKK 438          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_ORYSJ (Maturase K OS=Oryza sativa subsp. japonica GN=matK PE=2 SV=2)

HSP 1 Score: 221.09 bits (562), Expect = 3.380e-57
Identity = 116/197 (58.88%), Postives = 135/197 (68.53%), Query Frame = 3
Query:    9 QSSHLQSTSFQVLVERTYFYGKVEHLVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            QSS L+ TS    +ER  F  K+EH   ++   F+  +  V DP MHYVRYQGK+ILASK T LL  KWK YLV LWQ+ F   +QP R+ LN L       +FLGY S V +NSLLVR+QMLENSFLID  MKK DT VP+  LIGSL KA+FC   GHPISK  W+D SD  ++DRF RICRNL HYYSGSSKKK
Sbjct:  233 QSSCLRLTSSGTFLERIIFSRKMEHFGLMYPAFFRKTIWFVMDPLMHYVRYQGKAILASKGTLLLKKKWKCYLVRLWQYSFSFWTQPQRIHLNQLE--NSCFDFLGYFSSVPINSLLVRNQMLENSFLIDTQMKKFDTKVPVTPLIGSLAKAQFCTGSGHPISKPIWTDLSDWDILDRFGRICRNLFHYYSGSSKKK 427          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_ORYSI (Maturase K OS=Oryza sativa subsp. indica GN=matK PE=2 SV=2)

HSP 1 Score: 221.09 bits (562), Expect = 3.380e-57
Identity = 116/197 (58.88%), Postives = 135/197 (68.53%), Query Frame = 3
Query:    9 QSSHLQSTSFQVLVERTYFYGKVEHLVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            QSS L+ TS    +ER  F  K+EH   ++   F+  +  V DP MHYVRYQGK+ILASK T LL  KWK YLV LWQ+ F   +QP R+ LN L       +FLGY S V +NSLLVR+QMLENSFLID  MKK DT VP+  LIGSL KA+FC   GHPISK  W+D SD  ++DRF RICRNL HYYSGSSKKK
Sbjct:  233 QSSCLRLTSSGTFLERIIFSRKMEHFGLMYPAFFRKTIWFVMDPLMHYVRYQGKAILASKGTLLLKKKWKCYLVRLWQYSFSFWTQPQRIHLNQLE--NSCFDFLGYFSSVPINSLLVRNQMLENSFLIDTQMKKFDTKVPVTPLIGSLAKAQFCTGSGHPISKPIWTDLSDWDILDRFGRICRNLFHYYSGSSKKK 427          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_ORYSA (Maturase K OS=Oryza sativa GN=matK PE=2 SV=2)

HSP 1 Score: 221.09 bits (562), Expect = 3.380e-57
Identity = 116/197 (58.88%), Postives = 135/197 (68.53%), Query Frame = 3
Query:    9 QSSHLQSTSFQVLVERTYFYGKVEHLVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            QSS L+ TS    +ER  F  K+EH   ++   F+  +  V DP MHYVRYQGK+ILASK T LL  KWK YLV LWQ+ F   +QP R+ LN L       +FLGY S V +NSLLVR+QMLENSFLID  MKK DT VP+  LIGSL KA+FC   GHPISK  W+D SD  ++DRF RICRNL HYYSGSSKKK
Sbjct:  233 QSSCLRLTSSGTFLERIIFSRKMEHFGLMYPAFFRKTIWFVMDPLMHYVRYQGKAILASKGTLLLKKKWKCYLVRLWQYSFSFWTQPQRIHLNQLE--NSCFDFLGYFSSVPINSLLVRNQMLENSFLIDTQMKKFDTKVPVTPLIGSLAKAQFCTGSGHPISKPIWTDLSDWDILDRFGRICRNLFHYYSGSSKKK 427          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_ORYNI (Maturase K OS=Oryza nivara GN=matK PE=2 SV=3)

HSP 1 Score: 221.09 bits (562), Expect = 3.380e-57
Identity = 116/197 (58.88%), Postives = 135/197 (68.53%), Query Frame = 3
Query:    9 QSSHLQSTSFQVLVERTYFYGKVEHLVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            QSS L+ TS    +ER  F  K+EH   ++   F+  +  V DP MHYVRYQGK+ILASK T LL  KWK YLV LWQ+ F   +QP R+ LN L       +FLGY S V +NSLLVR+QMLENSFLID  MKK DT VP+  LIGSL KA+FC   GHPISK  W+D SD  ++DRF RICRNL HYYSGSSKKK
Sbjct:  233 QSSCLRLTSSGTFLERIIFSRKMEHFGLMYPAFFRKTIWFVMDPLMHYVRYQGKAILASKGTLLLKKKWKCYLVRLWQYSFSFWTQPQRIHLNQLE--NSCFDFLGYFSSVPINSLLVRNQMLENSFLIDTQMKKFDTKVPVTPLIGSLAKAQFCTGSGHPISKPIWTDLSDWDILDRFGRICRNLFHYYSGSSKKK 427          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_LATSA (Maturase K OS=Lathyrus sativus GN=matK PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 5.765e-57
Identity = 112/197 (56.85%), Postives = 137/197 (69.54%), Query Frame = 3
Query:    9 QSSHLQSTSFQVLVERTYFYGKVEHLVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            +SSHL+  SF V  ER +FY K EHL +VF KDF   L   KD  +HYVRYQGK ILASK+ P  MNKWK+Y + LWQ  F   SQP  + +N L   +++   LGY   VRLN  +VRSQML+N+FLI+  ++ +D  VPII LI SL  A+FCN LG PISK  W+D SD  +IDRF+RICRNLSHYY+GSSKKK
Sbjct:  229 KSSHLRFKSFSVFFERIFFYAKREHLEKVFYKDFSYPLTFFKDLNIHYVRYQGKCILASKNAPFWMNKWKHYFIHLWQCFFDVWSQPRMININPL--SEHSFQLLGYFLNVRLNRSVVRSQMLQNTFLIEIVIQNLDIIVPIIPLIRSLANAKFCNILGEPISKPVWADSSDFDIIDRFLRICRNLSHYYNGSSKKK 423          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_BELCH (Maturase K OS=Belamcanda chinensis GN=matK PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 5.765e-57
Identity = 114/204 (55.88%), Postives = 140/204 (68.63%), Query Frame = 3
Query:    9 QSSHLQSTSFQVLVERTYFYGKVEHL-------VEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            QSS+L+ TSF   +ER +FY K+EHL       + V    FQ  L   KDPFMHYVR QGK++LASK T  LM KWKY  V LWQ++FH   Q  R+ +N L    Y+  F+GYLS +  NS  VR+QMLENSFLID    K +T VP+I LIGSL+KA+FC   GHPISK  W+D SDS +I+RF R+CRNLSHY+SGSSKK+
Sbjct:  238 QSSYLRLTSFGTFLERRHFYVKMEHLQMQHLILIVVCRDYFQGTLWSFKDPFMHYVRCQGKAVLASKGTHFLMKKWKYNFVNLWQYYFHFWYQSYRIHINQL--SNYSFYFMGYLSSLLKNSSTVRNQMLENSFLIDTVTNKFETIVPVIFLIGSLSKAQFCTVSGHPISKPIWADLSDSEIIERFGRMCRNLSHYHSGSSKKQ 439          
The following BLAST results are available for this feature:
BLAST of CK937280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MATK_KNIUV1.981e-5756.93Maturase K OS=Kniphofia uvaria GN=matK PE=3 SV=1[more]
MATK_HELBU1.981e-5754.82Maturase K OS=Helonias bullata GN=matK PE=3 SV=1[more]
MATK_ANDPO1.981e-5756.35Maturase K OS=Andromeda polifolia GN=matK PE=3 SV=... [more]
MATK_ARIGL2.588e-5756.50Maturase K OS=Aristea glauca GN=matK PE=3 SV=1[more]
MATK_ORYSJ3.380e-5758.88Maturase K OS=Oryza sativa subsp. japonica GN=matK... [more]
MATK_ORYSI3.380e-5758.88Maturase K OS=Oryza sativa subsp. indica GN=matK P... [more]
MATK_ORYSA3.380e-5758.88Maturase K OS=Oryza sativa GN=matK PE=2 SV=2[more]
MATK_ORYNI3.380e-5758.88Maturase K OS=Oryza nivara GN=matK PE=2 SV=3[more]
MATK_LATSA5.765e-5756.85Maturase K OS=Lathyrus sativus GN=matK PE=3 SV=1[more]
MATK_BELCH5.765e-5755.88Maturase K OS=Belamcanda chinensis GN=matK PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004512_A12 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIIF_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937280 ID=CK937280; Name=CK937280; organism=Citrus sinensis; type=EST; length=600bp
GGGGTAACCAATCGTCTCATTTACAATCAACATCCTTTCAAGTCCTCGTT
GAGCGAACGTATTTCTATGGAAAAGTCGAACATCTTGTCGAAGTCTTTGC
TAAAGATTTTCAGGACATCTTAGGGTTGGTCAAGGATCCTTTCATGCATT
ATGTTAGATATCAAGGAAAATCCATTTTGGCTTCAAAGGATACGCCTCTT
CTGATGAATAAATGGAAATATTACCTTGTCGGTTTATGGCAATGGCATTT
TCACGCGTCTTCTCAACCAGGAAGGGTTCAGCTAAACCACTTATACTTAG
GCAAGTACGCTATTAACTTTCTGGGCTATCTTTCCGGTGTGCGACTAAAT
TCTTTGTTGGTACGGAGTCAAATGCTAGAAAATTCATTTCTAATAGATAA
TTCTATGAAGAAGGTCGATACGACCGTTCCAATTATTCATCTGATTGGAT
CATTGACTAAGGCGCGGTTTTGTAACGCATTAGGGCATCCTATCAGTAAG
TCGACTTGGTCCGATTTCTCTGATTCTCATCTTATCGACCGATTTGTGCG
TATATGTAGAAATCTTTCTCATTATTACAGCGGATCTTCAAAAAAAAAAA
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