CK937280

Overview
NameCK937280
Unique NameCK937280
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length600
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_CALPO (Maturase K OS=Callistemon polandii GN=matK PE=3 SV=4)

HSP 1 Score: 278.485 bits (711), Expect = 1.784e-74
Identity = 141/199 (70.85%), Postives = 162/199 (81.41%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVEV-FAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            NQSSHL+STS  +  ER +FY K+E  V+V F  DFQ IL   KDPFMHYVRYQGK ILASKDTPLLMNKWKYYLV LWQ+HF+A  QPGR+ +N L   KY+++FLGY   VRLNS +VRSQMLENSFLI+N+MKK +T VPII LIGSL+KA FCN LGHPISK T +D SDS +IDRF+RICRNLSHY+SGSSKKK
Sbjct:  225 NQSSHLRSTSSGIFFERIHFYVKIEDFVKVLFENDFQCILWFFKDPFMHYVRYQGKLILASKDTPLLMNKWKYYLVNLWQYHFYAWFQPGRIDINQLC--KYSLDFLGYRLSVRLNSSVVRSQMLENSFLINNTMKKFETIVPIIPLIGSLSKANFCNTLGHPISKPTRADSSDSDIIDRFLRICRNLSHYHSGSSKKK 421          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_CALPE (Maturase K OS=Calyptranthes pallens GN=matK PE=3 SV=2)

HSP 1 Score: 278.485 bits (711), Expect = 1.784e-74
Identity = 139/199 (69.85%), Postives = 161/199 (80.90%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVEVFA-KDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            NQSSHL+STS  +  ER YFY K+EH  + F   DFQ IL   KDPFMHYV+YQGKSILASKDTPL MNKWKYYLV LWQ+HF+A  QPGR+ +N L    Y+I+FLGY S VRLNS +VRSQMLENSF+I+N++KK +T VPII LIGSL+KA FCN LGHPISK T +D SDS +IDRF+RICRNLSHY+SGSSKKK
Sbjct:  226 NQSSHLRSTSSGIFFERIYFYVKIEHFAKXFFDNDFQCILWFFKDPFMHYVKYQGKSILASKDTPLFMNKWKYYLVNLWQYHFYAWFQPGRININQLC--NYSIDFLGYRSSVRLNSSVVRSQMLENSFIINNAIKKFETIVPIIPLIGSLSKANFCNTLGHPISKPTRADSSDSDIIDRFLRICRNLSHYHSGSSKKK 422          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_TOBAC (Maturase K OS=Nicotiana tabacum GN=matK PE=3 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.330e-74
Identity = 140/198 (70.71%), Postives = 155/198 (78.28%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            NQSSHL+STSF  L+ER YFYGK+E LVEVFAKDFQ  L L KDPFMHYVRYQGKSILASK T LLMNKWK+YLV  WQ H       GR+ +N L    ++ +F+GYLS VRLN  +VRSQMLENSFLI+N++KK DT VPII LIGSL KA FC  LGHPISK  WSD SDS +IDRF RICRNL HYYSGSSKKK
Sbjct:  232 NQSSHLRSTSFGALLERIYFYGKIERLVEVFAKDFQVTLWLFKDPFMHYVRYQGKSILASKGTFLLMNKWKFYLVNFWQCHCSLCFHTGRIHINQL--SNHSRDFMGYLSSVRLNPSMVRSQMLENSFLINNAIKKFDTLVPIIPLIGSLAKANFCTVLGHPISKPVWSDLSDSDIIDRFGRICRNLFHYYSGSSKKK 427          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_NICSY (Maturase K OS=Nicotiana sylvestris GN=matK PE=3 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.330e-74
Identity = 140/198 (70.71%), Postives = 155/198 (78.28%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            NQSSHL+STSF  L+ER YFYGK+E LVEVFAKDFQ  L L KDPFMHYVRYQGKSILASK T LLMNKWK+YLV  WQ H       GR+ +N L    ++ +F+GYLS VRLN  +VRSQMLENSFLI+N++KK DT VPII LIGSL KA FC  LGHPISK  WSD SDS +IDRF RICRNL HYYSGSSKKK
Sbjct:  232 NQSSHLRSTSFGALLERIYFYGKIERLVEVFAKDFQVTLWLFKDPFMHYVRYQGKSILASKGTFLLMNKWKFYLVNFWQCHCSLCFHTGRIHINQL--SNHSRDFMGYLSSVRLNPSMVRSQMLENSFLINNAIKKFDTLVPIIPLIGSLAKANFCTVLGHPISKPVWSDLSDSDIIDRFGRICRNLFHYYSGSSKKK 427          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_HEDHE (Maturase K OS=Hedera helix GN=matK PE=3 SV=2)

HSP 1 Score: 278.1 bits (710), Expect = 2.330e-74
Identity = 136/198 (68.69%), Postives = 159/198 (80.30%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            NQSSHL+STS   L+ER YFYGK+++LV+VF K FQ  L L+KDPFMHYVRYQGKSILASK TP LM KW YY V LWQ HF+  SQPGR+ +N LY   ++++ LGYLS  RLN  +VR QMLENSFLIDN++ K DT VPII LIGSL KA+FCN LGHPISK+ W+D SDS +IDRF RICRNLSHY+SGSS+KK
Sbjct:  228 NQSSHLRSTSSGTLLERIYFYGKIKYLVKVFVKAFQVNLLLLKDPFMHYVRYQGKSILASKGTPFLMKKWTYYFVNLWQCHFYLWSQPGRICINQLY--NHSLDLLGYLSSARLNPSMVRGQMLENSFLIDNAINKFDTIVPIIPLIGSLAKAKFCNVLGHPISKAVWTDLSDSDIIDRFGRICRNLSHYHSGSSQKK 423          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_NICCL (Maturase K OS=Nicotiana clevelandii GN=matK PE=3 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 3.043e-74
Identity = 139/198 (70.20%), Postives = 156/198 (78.79%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            NQSSHL+STSF  L+ER +FYGK+E LVEVFAKDFQ  L L KDPFMHYVRYQGKSILASK T LL+NKWK+YLV  WQ HF      GR+ +N L    ++ +F+GYLS VRLN  +VRSQMLENSFLI+N++KK DT VPII LIGSL KA FC  LGHPISK  WSD SDS +I RFVRICRNL HYYSGSSKKK
Sbjct:  232 NQSSHLRSTSFGALLERIFFYGKIERLVEVFAKDFQVTLWLFKDPFMHYVRYQGKSILASKGTFLLINKWKFYLVNFWQCHFSLCFHTGRIHINQL--SNHSRDFMGYLSSVRLNPSMVRSQMLENSFLINNAIKKFDTLVPIIPLIGSLAKANFCTVLGHPISKPVWSDLSDSDIIARFVRICRNLFHYYSGSSKKK 427          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_GORLA (Maturase K OS=Gordonia lasianthus GN=matK PE=3 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 3.043e-74
Identity = 135/197 (68.53%), Postives = 159/197 (80.71%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKK 596
            NQSSHL+S S    +ER YFYGK+EH +EVF KDFQ +L L KDPF+HYVRYQGKSILASK T LLMNKWKYYLV  WQ +F+  SQPGR+  N L   K++++FLGYLS VRLN  +VRSQMLENSFLI N++KK DT VPII +IGSL+KA+FCN LGHPISK  W+D SDS ++D+F RI RNLSHY+SGSSKK
Sbjct:  231 NQSSHLRSISSGTFLERRYFYGKIEHFLEVFTKDFQAVLWLFKDPFIHYVRYQGKSILASKGTSLLMNKWKYYLVNFWQCYFYMWSQPGRIHTNQL--SKHSLDFLGYLSSVRLNPSMVRSQMLENSFLIGNTIKKFDTLVPIIPMIGSLSKAKFCNVLGHPISKPVWTDLSDSDILDQFGRIYRNLSHYHSGSSKK 425          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_DIOKA (Maturase K OS=Diospyros kaki GN=matK PE=3 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 3.043e-74
Identity = 138/197 (70.05%), Postives = 157/197 (79.70%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKK 596
            NQSS+L+S S    +ER YFYGK+EH VEVF KDF+ IL L KDPFMHYVRYQGKS+LASK T LLMNKWKYYLV  WQ +F+  SQPGR+  N L    ++++ LGYLS VRLN  +VRSQMLENSFLI N++KK DT VPII LIGSL+KA+FCN LGHPISK  WSD SDS +IDRF RI RNLSHYYSGSSKK
Sbjct:  227 NQSSYLRSISSGTFLERIYFYGKIEHFVEVFTKDFKAILWLFKDPFMHYVRYQGKSLLASKGTSLLMNKWKYYLVNFWQCYFYMWSQPGRIHRNQL--SNHSLDLLGYLSSVRLNPSIVRSQMLENSFLIGNAIKKFDTIVPIIPLIGSLSKAKFCNVLGHPISKPVWSDLSDSDIIDRFGRIYRNLSHYYSGSSKK 421          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_ACTDE (Maturase K OS=Actinidia deliciosa GN=matK PE=3 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 3.043e-74
Identity = 136/197 (69.04%), Postives = 157/197 (79.70%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKK 596
            NQSSHL+S S    +ER YFYGK+EH V+VF KDFQDIL L KDPFMHYVRYQG SILASK T LLMNKWKYYLV  WQ +F+   QPGR+Q+N   L  ++++FLGYLS VRLN  +VRSQMLENSFLI N++KK DT VPII LIGSL KA+FCN LGHP+SK  W+D SDS +IDRF RI RNLSHY++GS KK
Sbjct:  227 NQSSHLRSISSGTFLERIYFYGKIEHFVKVFTKDFQDILWLFKDPFMHYVRYQGNSILASKGTSLLMNKWKYYLVNFWQCYFYMWCQPGRIQINQ--LSNHSLDFLGYLSSVRLNPSMVRSQMLENSFLIGNAIKKFDTIVPIIPLIGSLYKAKFCNVLGHPVSKPVWADLSDSDIIDRFGRIYRNLSHYHTGSLKK 421          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_PHASI (Maturase K OS=Phaulothamnus spinescens GN=matK PE=3 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 3.974e-74
Identity = 135/198 (68.18%), Postives = 160/198 (80.81%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            NQSSHL+STSF  L+ER +FYGK+E+LV VF KDF  IL L K+PF HYVRYQGKSILASK T LLM+KWKYYL+  WQ HF   SQP R+ +N L    ++++F+G+ S VRLNS +VRSQMLENSFLIDN++ K DT +PII LIGSL KA+FCN LGHPISKS W+D SDS +IDRF RIC+NLSHYYSGSS+KK
Sbjct:  228 NQSSHLRSTSFGALLERIHFYGKLEYLVNVFTKDFGVILWLFKEPFPHYVRYQGKSILASKGTSLLMHKWKYYLIHFWQCHFSVWSQPRRIYINRL--SNHSLDFMGFFSSVRLNSSVVRSQMLENSFLIDNTIMKFDTIIPIIPLIGSLAKAKFCNVLGHPISKSVWTDLSDSDIIDRFGRICKNLSHYYSGSSRKK 423          
The following BLAST results are available for this feature:
BLAST of CK937280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MATK_CALPO1.784e-7470.85Maturase K OS=Callistemon polandii GN=matK PE=3 SV... [more]
MATK_CALPE1.784e-7469.85Maturase K OS=Calyptranthes pallens GN=matK PE=3 S... [more]
MATK_TOBAC2.330e-7470.71Maturase K OS=Nicotiana tabacum GN=matK PE=3 SV=1[more]
MATK_NICSY2.330e-7470.71Maturase K OS=Nicotiana sylvestris GN=matK PE=3 SV... [more]
MATK_HEDHE2.330e-7468.69Maturase K OS=Hedera helix GN=matK PE=3 SV=2[more]
MATK_NICCL3.043e-7470.20Maturase K OS=Nicotiana clevelandii GN=matK PE=3 S... [more]
MATK_GORLA3.043e-7468.53Maturase K OS=Gordonia lasianthus GN=matK PE=3 SV=... [more]
MATK_DIOKA3.043e-7470.05Maturase K OS=Diospyros kaki GN=matK PE=3 SV=1[more]
MATK_ACTDE3.043e-7469.04Maturase K OS=Actinidia deliciosa GN=matK PE=3 SV=... [more]
MATK_PHASI3.974e-7468.18Maturase K OS=Phaulothamnus spinescens GN=matK PE=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004512_A12 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIIF_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937280 ID=CK937280; Name=CK937280; organism=Citrus sinensis; type=EST; length=600bp
GGGGTAACCAATCGTCTCATTTACAATCAACATCCTTTCAAGTCCTCGTT
GAGCGAACGTATTTCTATGGAAAAGTCGAACATCTTGTCGAAGTCTTTGC
TAAAGATTTTCAGGACATCTTAGGGTTGGTCAAGGATCCTTTCATGCATT
ATGTTAGATATCAAGGAAAATCCATTTTGGCTTCAAAGGATACGCCTCTT
CTGATGAATAAATGGAAATATTACCTTGTCGGTTTATGGCAATGGCATTT
TCACGCGTCTTCTCAACCAGGAAGGGTTCAGCTAAACCACTTATACTTAG
GCAAGTACGCTATTAACTTTCTGGGCTATCTTTCCGGTGTGCGACTAAAT
TCTTTGTTGGTACGGAGTCAAATGCTAGAAAATTCATTTCTAATAGATAA
TTCTATGAAGAAGGTCGATACGACCGTTCCAATTATTCATCTGATTGGAT
CATTGACTAAGGCGCGGTTTTGTAACGCATTAGGGCATCCTATCAGTAAG
TCGACTTGGTCCGATTTCTCTGATTCTCATCTTATCGACCGATTTGTGCG
TATATGTAGAAATCTTTCTCATTATTACAGCGGATCTTCAAAAAAAAAAA
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