CK937280

Overview
NameCK937280
Unique NameCK937280
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length600
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_PRUDU (Maturase K OS=Prunus dulcis GN=matK PE=3 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 8.853e-74
Identity = 139/200 (69.50%), Postives = 161/200 (80.50%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVE-VFAKDFQ-DILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            NQSSHLQ TS  +  ER +FY K+++ VE VFA DF   IL   KDPFMHYVRYQGKSILASKDTPLLMNKWKYYLV LWQ H +  SQPGR+ +N L   K++++FLGY S +R N  +VRSQMLENSF+ DN+MKK+DT VPII LIGSL K +FCNALGHPISKSTW+D SD  +IDRF+RICRNLSHYYSGSS+KK
Sbjct:  225 NQSSHLQLTSSGIFFERIHFYEKIKYPVEEVFANDFPASILWFFKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVNLWQCHSYVWSQPGRIYINKL--SKHSLDFLGYFSSIRPNLSVVRSQMLENSFITDNAMKKLDTLVPIIPLIGSLAKVKFCNALGHPISKSTWADSSDFDIIDRFLRICRNLSHYYSGSSRKK 422          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_LIQFO (Maturase K OS=Liquidambar formosana GN=matK PE=3 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 8.853e-74
Identity = 138/198 (69.70%), Postives = 157/198 (79.29%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            NQSSHL+STS   L+ER YFYGK++HLVE FA DFQ    L KDPF+HYVRYQGKSILASK TPLLMNKWKYYLV  WQ HF+  SQP R+ +N L    ++  FLGYLS V LN  +VR+QMLENSF+IDN++KK D  VPII LIGSL KA+FCN LGHPISK   +D SDS +IDRFVRICRNLSHY+SGSSKKK
Sbjct:  227 NQSSHLRSTSSGALLERIYFYGKIKHLVEAFANDFQASPWLFKDPFVHYVRYQGKSILASKGTPLLMNKWKYYLVNFWQCHFYVWSQPVRIYINQL--SNHSFYFLGYLSSVGLNPSVVRNQMLENSFIIDNAIKKFDIIVPIIPLIGSLAKAKFCNVLGHPISKPARADSSDSDIIDRFVRICRNLSHYHSGSSKKK 422          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_ANTAN (Maturase K OS=Anthocercis angustifolia GN=matK PE=3 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 8.853e-74
Identity = 138/198 (69.70%), Postives = 154/198 (77.78%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            NQSSHL+STSF  L+ER YFYGK+E LVEVFAKDFQ  L L KDPFMHYVRYQGKSI+ASK T LLMNKWK+YLV  WQ HF      GR+ +N L    ++ +F+GYLS VRLN  +VRSQMLENSFLI+N++KK D  VPII LIGSL K  FC  LGHPISK  WSD SDS +IDRF RICRNL HYYSGSSKKK
Sbjct:  232 NQSSHLRSTSFGALLERIYFYGKIERLVEVFAKDFQVTLWLFKDPFMHYVRYQGKSIMASKGTFLLMNKWKFYLVNFWQCHFSLCFHTGRIHINQL--SNHSRDFMGYLSSVRLNPSMVRSQMLENSFLINNAIKKFDILVPIIPLIGSLAKENFCTVLGHPISKPVWSDLSDSDIIDRFGRICRNLFHYYSGSSKKK 427          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_SULSU (Maturase K OS=Sullivantia sullivantii GN=matK PE=3 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.156e-73
Identity = 131/198 (66.16%), Postives = 160/198 (80.81%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            NQSSHLQSTS+  L ER YFYGK++HLVEVF+ DF     L KDPFMHY+RYQGKSILASK TPLL+NKWKYYLV  WQ H++  SQ GR+ +N   L  ++++FLGYLS VRLN  +VR+QMLENSF+IDN++KK D  VPI+ LI SL KA+FCN +G PISK +W++ SDS +IDRFVRICRN+SHY+SG+SKKK
Sbjct:  229 NQSSHLQSTSYGTLFERIYFYGKIKHLVEVFSNDFPTAPWLFKDPFMHYIRYQGKSILASKGTPLLLNKWKYYLVNFWQCHYYVWSQSGRIHINQ--LSNHSLDFLGYLSSVRLNPSVVRNQMLENSFIIDNAIKKFDIIVPILPLIRSLAKAKFCNVVGDPISKPSWAESSDSDIIDRFVRICRNISHYHSGASKKK 424          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_CUBDO (Maturase K OS=Cubanola domingensis GN=matK PE=3 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.156e-73
Identity = 138/198 (69.70%), Postives = 157/198 (79.29%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            NQSSHL+STSF V +ER YFY K+E LVEVFAKDF+  L L KDPFMHYVRYQGKS L SK TPLLMNKWKYYLV  WQ +F      GRV +N L    + +NF+GYLS VRLN  +VRSQMLENSFLI+N++KK+DT VPII LIGSL KA+FCN LGHPISK  W+  SDS +IDRF +ICRNLSHY+SGSSKKK
Sbjct:  228 NQSSHLRSTSFGVFLERIYFYVKMERLVEVFAKDFRASLWLFKDPFMHYVRYQGKSTLVSKGTPLLMNKWKYYLVNFWQCYFDLWVHSGRVYINQL--PNHTLNFIGYLSSVRLNPSMVRSQMLENSFLINNAIKKLDTLVPIIPLIGSLAKAKFCNLLGHPISKPAWAGLSDSDIIDRFGQICRNLSHYHSGSSKKK 423          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_COFAR (Maturase K OS=Coffea arabica GN=matK PE=3 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.156e-73
Identity = 138/197 (70.05%), Postives = 154/197 (78.17%), Query Frame = 3
Query:    9 QSSHLQSTSFQVLVERTYFYGKVEHLVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            QSSHL+STSF V +ER YFY K E LVEVFAKDFQ  L L KDPF+HYVRYQGKSIL S  TPLLMNKWK YLV  WQ HF     PGRV +N L    Y+ NF+GYLS VRLN  +VRSQMLEN+FLI+N++KK DT VP+I LIGSL KA+FCN LGHPISK  W+D +DS +IDRF  ICRNLSHYYSGSSKKK
Sbjct:  229 QSSHLRSTSFGVFLERIYFYEKKERLVEVFAKDFQASLWLFKDPFIHYVRYQGKSILVSNGTPLLMNKWKSYLVNFWQCHFGIWFHPGRVYINQL--PNYSFNFMGYLSSVRLNHSMVRSQMLENAFLINNAIKKFDTLVPLIPLIGSLAKAKFCNLLGHPISKPIWTDLADSDIIDRFWHICRNLSHYYSGSSKKK 423          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_CAPHA (Maturase K OS=Capparis hastata GN=matK PE=3 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.156e-73
Identity = 134/197 (68.02%), Postives = 157/197 (79.70%), Query Frame = 3
Query:    9 QSSHLQSTSFQVLVERTYFYGKVEHLVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            +SSHL+STS  VL ER +FY K+EHL++VF  +FQDILGL KDPF+HYVRY GK ILA+KDTPLLMNKWKYY V LWQWHF    Q  +V +N L   K  ++FLGYLS +RLN L+VRSQMLENSFLIDN  K+ DT +PI  +IGS  K +FCN LG+PISKSTW D SDS ++DRFVRICRNLSHY+SGSSKKK
Sbjct:  228 RSSHLRSTSSGVLFERIFFYRKIEHLLKVFVNNFQDILGLFKDPFIHYVRYHGKCILAAKDTPLLMNKWKYYFVNLWQWHFSVWFQWQKVHINKL--SKDNLDFLGYLSSLRLNPLVVRSQMLENSFLIDNVRKEFDTKIPICSIIGSFAKEKFCNVLGYPISKSTWMDSSDSDILDRFVRICRNLSHYHSGSSKKK 422          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_NICOT (Maturase K OS=Nicotiana otophora GN=matK PE=3 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 1.510e-73
Identity = 139/198 (70.20%), Postives = 155/198 (78.28%), Query Frame = 3
Query:    6 NQSSHLQSTSFQVLVERTYFYGKVEHLVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            N+SSHL+STSF  L+ER YFY K+E LVEVFAKDFQ  L L KDPFMHYVRYQGKSILASK T LLMNKWK+YLV  WQ HF      GR+ +N L     + +F+GYLS VRLN  +VRSQMLENSFLI+N++KK DT VPII LIGSL KA FC  LGHPISK  WSD SDS++IDRF RICRNL HYYSGSSKKK
Sbjct:  232 NRSSHLRSTSFGALLERIYFYVKIERLVEVFAKDFQVTLWLFKDPFMHYVRYQGKSILASKGTFLLMNKWKFYLVNFWQCHFSLCFHTGRIHINQL--SNDSRDFMGYLSSVRLNPSMVRSQMLENSFLINNAIKKFDTLVPIIPLIGSLAKANFCTVLGHPISKPVWSDLSDSYIIDRFGRICRNLFHYYSGSSKKK 427          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_FAGHA (Maturase K OS=Fagus hayatae GN=matK PE=3 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 1.510e-73
Identity = 137/199 (68.84%), Postives = 158/199 (79.40%), Query Frame = 3
Query:    3 GNQSSHLQSTSFQVLVERTYFYGKVEHLVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            GNQSSHL+  S  VL ER Y + K+EH  EVFA DF  I   +KDPFMHYVRYQGKSILASKDTPLLMNKWKYYLV LWQ HF+  S PGR+ +N L   K++++F GY S V+LN  +VRSQMLENSFLI+N+ KK+D  VPII LIGSL KARFCNALGHPISK T +D SD  +++RF+RICRNLSHYYSGSSKKK
Sbjct:  226 GNQSSHLRIISSGVLFERLYLHKKIEHFAEVFANDFPVIPCFLKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVNLWQCHFYVWSHPGRIHINQL--SKHSLDFWGYFSSVQLNPSVVRSQMLENSFLINNAPKKLDIIVPIIPLIGSLAKARFCNALGHPISKLTRADLSDFEILNRFLRICRNLSHYYSGSSKKK 422          
BLAST of CK937280 vs. ExPASy Swiss-Prot
Match: MATK_BATMA (Maturase K OS=Batis maritima GN=matK PE=3 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 1.510e-73
Identity = 136/197 (69.04%), Postives = 158/197 (80.20%), Query Frame = 3
Query:    9 QSSHLQSTSFQVLVERTYFYGKVEHLVEVFAKDFQDILGLVKDPFMHYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTTVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGSSKKK 599
            QSSHLQS SF +L+ER YFYGK+E L++VF K FQDIL L KDPFMHYVRY+GKSILASK  PLL++KWKYY V LWQ HF+  SQ  RV +  L   K  +NFLGYLS +RLN L+VRSQMLENS+LIDN +KK  T +P+  +I SL KARFCN LGHPISKSTW+D SDS ++DRFVRI RNL+HYYSGSSKKK
Sbjct:  224 QSSHLQSNSFGILIERIYFYGKIESLLKVFIKKFQDILWLSKDPFMHYVRYRGKSILASKHGPLLISKWKYYFVNLWQCHFYVWSQSKRVHIKQL--SKDYLNFLGYLSSLRLNFLVVRSQMLENSYLIDNVIKKFHTKIPMSSIIASLAKARFCNVLGHPISKSTWTDSSDSEILDRFVRIYRNLAHYYSGSSKKK 418          
The following BLAST results are available for this feature:
BLAST of CK937280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MATK_PRUDU8.853e-7469.50Maturase K OS=Prunus dulcis GN=matK PE=3 SV=1[more]
MATK_LIQFO8.853e-7469.70Maturase K OS=Liquidambar formosana GN=matK PE=3 S... [more]
MATK_ANTAN8.853e-7469.70Maturase K OS=Anthocercis angustifolia GN=matK PE=... [more]
MATK_SULSU1.156e-7366.16Maturase K OS=Sullivantia sullivantii GN=matK PE=3... [more]
MATK_CUBDO1.156e-7369.70Maturase K OS=Cubanola domingensis GN=matK PE=3 SV... [more]
MATK_COFAR1.156e-7370.05Maturase K OS=Coffea arabica GN=matK PE=3 SV=1[more]
MATK_CAPHA1.156e-7368.02Maturase K OS=Capparis hastata GN=matK PE=3 SV=1[more]
MATK_NICOT1.510e-7370.20Maturase K OS=Nicotiana otophora GN=matK PE=3 SV=1[more]
MATK_FAGHA1.510e-7368.84Maturase K OS=Fagus hayatae GN=matK PE=3 SV=1[more]
MATK_BATMA1.510e-7369.04Maturase K OS=Batis maritima GN=matK PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004512_A12 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIIF_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937280 ID=CK937280; Name=CK937280; organism=Citrus sinensis; type=EST; length=600bp
GGGGTAACCAATCGTCTCATTTACAATCAACATCCTTTCAAGTCCTCGTT
GAGCGAACGTATTTCTATGGAAAAGTCGAACATCTTGTCGAAGTCTTTGC
TAAAGATTTTCAGGACATCTTAGGGTTGGTCAAGGATCCTTTCATGCATT
ATGTTAGATATCAAGGAAAATCCATTTTGGCTTCAAAGGATACGCCTCTT
CTGATGAATAAATGGAAATATTACCTTGTCGGTTTATGGCAATGGCATTT
TCACGCGTCTTCTCAACCAGGAAGGGTTCAGCTAAACCACTTATACTTAG
GCAAGTACGCTATTAACTTTCTGGGCTATCTTTCCGGTGTGCGACTAAAT
TCTTTGTTGGTACGGAGTCAAATGCTAGAAAATTCATTTCTAATAGATAA
TTCTATGAAGAAGGTCGATACGACCGTTCCAATTATTCATCTGATTGGAT
CATTGACTAAGGCGCGGTTTTGTAACGCATTAGGGCATCCTATCAGTAAG
TCGACTTGGTCCGATTTCTCTGATTCTCATCTTATCGACCGATTTGTGCG
TATATGTAGAAATCTTTCTCATTATTACAGCGGATCTTCAAAAAAAAAAA
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