CN187171

Overview
NameCN187171
Unique NameCN187171
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187171 vs. ExPASy Swiss-Prot
Match: KAD_CAMFF (Adenylate kinase OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=adk PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.202e-13
Identity = 44/140 (31.43%), Postives = 73/140 (52.14%), Query Frame = -2
Query:  311 SGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAV----TKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVK 718
            SGSE G +I + I +G +VP EV +  +  A+  S  +  LIDG+PR+EE     + V    ++++ + V+  D SEE    R+L R +G  DDN E    R KV+L+    +  +Y  K  +  I+  + +  +   +K
Sbjct:   44 SGSELGKLIDSFISKGNLVPLEVVVNTIISAIRSSDKNYILIDGYPRSEEQMRELDRVLASQSEVKLDGVIEVDVSEEVARNRVLGRARG-ADDNNEVFNNRMKVYLDPIKEIRAFYNDKKILHMINGERTIETIVADMK 182          
BLAST of CN187171 vs. ExPASy Swiss-Prot
Match: KAD_THEM4 (Adenylate kinase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=adk PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.488e-13
Identity = 45/166 (27.11%), Postives = 85/166 (51.20%), Query Frame = -2
Query:  314 SENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKI---EPEFVLFFDCSEEEMERRILNR----NQG-------------------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAV 712
            SE G  +++++K G++VP ++T  ++++ + +    K F++DG+PR      A + + K    E +F ++F+ SE+ + +RI NR    N G                         REDD  E +R+R+KV+++++ PV++YY    K+  +D +  V  V   V
Sbjct:   43 SELGRKVEDILKRGELVPDDLTNVIVKERLSKPDCKKGFILDGYPRTVAQAKALDEILKKLGRELKFAIYFEVSEDVVVKRISNRRICKNCGKIYNLITLPPKINGKCDVCGGELYQREDDREEVVRRRYKVYMDNTYPVIEYYRKSNKLFTVDGSMDVDSVIKEV 208          
BLAST of CN187171 vs. ExPASy Swiss-Prot
Match: KAD_STRAW (Adenylate kinase OS=Streptomyces avermitilis GN=adk PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.488e-13
Identity = 53/172 (30.81%), Postives = 83/172 (48.26%), Query Frame = -2
Query:  311 SENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRNEENRAAFEAVTKIEP---EFVLFFDCSEEEMERRILNRN------------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV----FDAVK 712
            +E G + ++ + EG +VP EVTI + +  ME+    + FL+DGFPRN +   A + + K E    + VL  +  E+E+ +RI  R                                 R+DD+ ET+R+R +V+   + P++ YY A+G V  I A  PV EV     DA+K
Sbjct:   43 TELGKLAKSYMDEGNLVPDEVTIAMAKDRMEQPDAVNGFLLDGFPRNVKQAEALDEMLKSEGMKLDAVLDLEVPEDEVVKRIAGRRICRNDSAHVFHVSYKPPKQEGVCDVCGGELYQRDDDSEETVRRRLEVYHTQTEPIIDYYRAQGLVVTISALGPVEEVTQRAMDALK 214          
BLAST of CN187171 vs. ExPASy Swiss-Prot
Match: KAD_BACFR (Adenylate kinase OS=Bacteroides fragilis GN=adk PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.488e-13
Identity = 47/147 (31.97%), Postives = 79/147 (53.74%), Query Frame = -2
Query:  299 SGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLI-DGFPRNEENRAAFEAVTKIEPEFV---LFFDCSEEEMERRILNRNQ--GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVF-DAVKAVFT 718
            +G+E G   +  I +G+++P E+ + +L    +   + K +I DGFPR      A + + K   + +   L  D  EEE+  R++ R +  GR DDN ETI+KR  V+   + P+ +YY+ +GK + I+    +  +F D  KAV T
Sbjct:   42 NGTELGKTAKGYIDQGQLIPDELMVDILASVFDSFKDSKGVIFDGFPRTIPQAEALKVMLKERGQDISVMLDLDVPEEELMTRLIKRGKESGRADDNEETIKKRLVVYNTQTSPLKEYYKGEGKYQHINGLGTMEGIFEDICKAVDT 188          
BLAST of CN187171 vs. ExPASy Swiss-Prot
Match: KAD_BACFN (Adenylate kinase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=adk PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.488e-13
Identity = 47/147 (31.97%), Postives = 79/147 (53.74%), Query Frame = -2
Query:  299 SGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLI-DGFPRNEENRAAFEAVTKIEPEFV---LFFDCSEEEMERRILNRNQ--GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVF-DAVKAVFT 718
            +G+E G   +  I +G+++P E+ + +L    +   + K +I DGFPR      A + + K   + +   L  D  EEE+  R++ R +  GR DDN ETI+KR  V+   + P+ +YY+ +GK + I+    +  +F D  KAV T
Sbjct:   42 NGTELGKTAKGYIDQGQLIPDELMVDILASVFDSFKDSKGVIFDGFPRTIPQAEALKVMLKERGQDISVMLDLDVPEEELMTRLIKRGKESGRADDNEETIKKRLVVYNTQTSPLKEYYKGEGKYQHINGLGTMEGIFEDICKAVDT 188          
BLAST of CN187171 vs. ExPASy Swiss-Prot
Match: KAD_BRAHW (Adenylate kinase OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=adk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.167e-13
Identity = 46/140 (32.86%), Postives = 76/140 (54.29%), Query Frame = -2
Query:  311 SGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVK 718
            +G+E G   ++ + +G++VP  + I +L+  +++    + F++DGFPR  E       + +    +   V+    SEE +  R+L R  GR DDN ETI+ R KVF   S PV+ YY  K K+ KI++     EV+  +K
Sbjct:   42 NGTELGKTAKSYMDKGELVPDSLVIDMLKDRIKKDDCKNGFMLDGFPRTIEQAKELSNILESLNYKISAVIDIFASEEIIIDRLLKR--GRADDNEETIKNRLKVFENQSKPVLDYYSDKAKIIKIESIGTPEEVYAKIK 179          
BLAST of CN187171 vs. ExPASy Swiss-Prot
Match: KAD_MYCA9 (Adenylate kinase OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=adk PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.361e-13
Identity = 47/135 (34.81%), Postives = 74/135 (54.81%), Query Frame = -2
Query:  323 GSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRNEENR---AAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVF 715
            G+E G   +  +  G +VPSEVT K+++  ++E      F++DGFPR  +     AA E    +  + VL F    EE+ +R+L R  GR DD  + IR R  V+ + + P+++YY+    ++ IDA   V EVF
Sbjct:   42 GTELGLQAKQYLDAGDLVPSEVTNKMVEARLDEPDAAAGFILDGFPRTVDQADALAAMEEARGVTIDAVLEFRVPVEELVQRLLGR--GRADDTEDIIRNRLNVYRDETAPLLEYYQ--NVLQTIDAVGTVDEVF 172          
BLAST of CN187171 vs. ExPASy Swiss-Prot
Match: KAD_STRMU (Adenylate kinase OS=Streptococcus mutans GN=adk PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.223e-12
Identity = 48/165 (29.09%), Postives = 82/165 (49.70%), Query Frame = -2
Query:  305 SENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK--FLIDGFPRNEENRAAFEAVTK---IEPEFVLFFD----CSEEEMERRILNRNQG--------------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAV 712
            +E GT+ ++ I +G++VP EVT  ++++ + ES   K  FL+DG+PR  E   A + +     ++ + V+  D    C  E +  RI+NR  G                    REDD  ET+++R  V +    P+++YY  KG V  I+  + +  VF+ +  V
Sbjct:   43 TEMGTLAKSFIDKGELVPDEVTNGIVKERLSESDITKKGFLLDGYPRTIEQAHALDEILSKLNLKLDGVINIDVDPACLVERLSGRIINRKTGETYHKVFNPPADYNEDDYYQREDDKPETVKRRLDVNIAQGHPIIEYYRNKGLVYDIEGNQDINLVFETIAKV 207          
BLAST of CN187171 vs. ExPASy Swiss-Prot
Match: KAD_PROAC (Adenylate kinase OS=Propionibacterium acnes GN=adk PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.597e-12
Identity = 44/149 (29.53%), Postives = 79/149 (53.02%), Query Frame = -2
Query:  290 SGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPE---FVLFFDCSEEEMERRILNRNQ--GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTPKD 718
            +G+E G  ++ ++  G +VP E+T  ++  +  ++   + FL+DG+PRN     A +A  K   +    V+  D   E + +R+L R +  GR DDN ETIR R KV+   + P++++Y + G +  +D    + EV   + A    K+
Sbjct:   41 NGTELGKKVKAIMDAGDLVPDELTDAIVVDRLNQDDAANGFLLDGYPRNMHQVEALDAYLKEHGQRLDAVISLDVDPELLTQRLLKRAEIEGRTDDNEETIRNRMKVYSSQTEPLLEHYRSAGILVPVDGVGEIDEVRQRIFAALDSKN 189          
BLAST of CN187171 vs. ExPASy Swiss-Prot
Match: KAD_OENOB (Adenylate kinase OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=adk PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.597e-12
Identity = 43/140 (30.71%), Postives = 77/140 (55.00%), Query Frame = -2
Query:  311 SENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK---FLIDGFPRNEENRAAFEAVTK-IEPEF--VLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVK 712
            +E G   ++ +  G +VP E+T  ++ + + E+       F++DG+PRN     + E+  + I+ +   V++ D SE+ +  R+L R  GREDD  E +  R  V  + ++P+V+YY  KG +  IDA   V+ V+  +K
Sbjct:   45 TELGDKAKSFMDAGNLVPDEITNGIVNERLNEADVKDAGGFILDGYPRNTSQADSLESFLRSIQQKLNAVIYLDASEKTVTNRMLGR--GREDDTPEVVAHRIDVAKKETMPLVEYYRNKGSLYTIDANGEVSVVYPKIK 182          
The following BLAST results are available for this feature:
BLAST of CN187171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
KAD_CAMFF4.202e-1331.43Adenylate kinase OS=Campylobacter fetus subsp. fet... [more]
KAD_THEM45.488e-1327.11Adenylate kinase OS=Thermosipho melanesiensis (str... [more]
KAD_STRAW5.488e-1330.81Adenylate kinase OS=Streptomyces avermitilis GN=ad... [more]
KAD_BACFR5.488e-1331.97Adenylate kinase OS=Bacteroides fragilis GN=adk PE... [more]
KAD_BACFN5.488e-1331.97Adenylate kinase OS=Bacteroides fragilis (strain A... [more]
KAD_BRAHW7.167e-1332.86Adenylate kinase OS=Brachyspira hyodysenteriae (st... [more]
KAD_MYCA99.361e-1334.81Adenylate kinase OS=Mycobacterium abscessus (strai... [more]
KAD_STRMU1.223e-1229.09Adenylate kinase OS=Streptococcus mutans GN=adk PE... [more]
KAD_PROAC1.597e-1229.53Adenylate kinase OS=Propionibacterium acnes GN=adk... [more]
KAD_OENOB1.597e-1230.71Adenylate kinase OS=Oenococcus oeni (strain BAA-33... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0004A20_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0004A20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187171 ID=CN187171; Name=CN187171; organism=Citrus sinensis; type=EST; length=719bp
CTTTTTTGACCGTGAAATTCAATCAATTACTTTTTTTTTTTTTTAAAGCC
TTAATGCTGTTATTATTACTCTTGATCTTGCTATTACCCTCTCAATAACA
AGAATACATAGGCAAACAAGAATAAATATCATGATACACTATGAACTTCT
ATGACATTCTCGTAAAACATGGGGCATAATAACCTCATAATAATAAAGTA
CAATAATAGGCAGCAGCCAACAACAATACCACCACCTTGATATTAAATCT
GATACTCTGGACAGAGAAGACCTAAGCAGCAGCCTTCTCATCTTTTGGGG
TAAAAACAGCTTTAACAGCATCAAAAACCTCTGCAACAGGCTTTGCAGCA
TCAATCTTCCGAACTTTACCCTTAGCTTCATAATATTGAACCACAGGGAG
ACTAGATTCTAAGAAAACCTTAAACCGCTTCCTAATTGTCTCAACGTTAT
CATCTTCTCTTCCCTGATTCCTATTCAAAATGCGCCTCTCCATCTCCTCC
TCAGAACAGTCAAAAAACAGAACGAATTCTGGCTCAATTTTGGTAACAGC
TTCAAATGCAGCACGATTTTCCTCGTTTCTGGGAAAACCATCGATGAGAA
ATTTATCATTTCCACTTTCCTCCATTGCTTTTTGGAGAAGCTTAATTGTG
ACCTCTGAAGGAACGATTTTTCCCTCTTTAATCATGTTCTGAATCATGGT
TCCATTTTCAGAGCCAGAT
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