CN187171

Overview
NameCN187171
Unique NameCN187171
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187171 vs. ExPASy Swiss-Prot
Match: KAD1_SYNY3 (Adenylate kinase 1 OS=Synechocystis sp. (strain PCC 6803) GN=adk1 PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.035e-11
Identity = 43/145 (29.66%), Postives = 80/145 (55.17%), Query Frame = -2
Query:  296 GSENGTMIQNMIKEGKIVPSEVTIKLLQKAM-EESGNDKFLIDGFPRNEENRAAF--EAVTKI--EPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTP 715
            G+E G   +  + +G++VP ++ + L+++ +  +     +++DGFPRN  N+A F  E +  I     +V+     +E +  R+L R  GR DDN  TIR R  V+ E + P++ YY+ +GK+  +D  +PV  +   ++ +  P
Sbjct:   44 GTELGNQAKGYMDKGELVPDQLILGLIEERLGHKDAKAGWILDGFPRNV-NQAIFLDELLVNIGHRTHWVINLKVPDEVIVERLLAR--GRADDNETTIRNRLLVYTEQTAPLMAYYQEQGKLYSLDGNQPVEAIATNLEKLVKP 185          
BLAST of CN187171 vs. ExPASy Swiss-Prot
Match: KAD_SYNS9 (Adenylate kinase OS=Synechococcus sp. (strain CC9902) GN=adk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.352e-11
Identity = 38/138 (27.54%), Postives = 74/138 (53.62%), Query Frame = -2
Query:  314 SGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVT---KIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAV 718
            +GSE G   + ++  G++V  ++ + +++  M+    + +L+DGFPR      A E +    K   E V+  +  +  +  R+L+R  GR DDN + IR R +V+ + + P++ YY+ KG +  + A   V E+ + +
Sbjct:   43 AGSELGKEAEAVMNRGELVSDQLVLAIVESQMKALSGEGWLLDGFPRTVPQAEALEPLLNELKQPIEAVVLLELDDAVLITRMLSR--GRADDNEDVIRNRLEVYRDKTAPLISYYQNKGLLISVPAQGSVEEITERI 178          
BLAST of CN187171 vs. ExPASy Swiss-Prot
Match: KAD_SYNJB (Adenylate kinase OS=Synechococcus sp. GN=adk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.352e-11
Identity = 38/129 (29.46%), Postives = 78/129 (60.47%), Query Frame = -2
Query:  305 GKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKI---EPEFVLFFDCSEEEMERRILNRN--QGREDD-NVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAV 673
            G++VP EV I +++  +++S    +++DGFPR      A E + +    + ++VL  +  +E +  R+L R   QGR DD +   I KR +V+ + + P++ +YEAKG++++++  +P+  V + ++A+
Sbjct:   57 GELVPDEVLIGMVKGQLQQSPEQGWILDGFPRTLAQAEALEELLQELGQDYDYVLNLEVPDEVVVARLLARGKEQGRSDDADRSVILKRLEVYRQQTAPLIDFYEAKGRLQRVNGNQPMESVQEHLQAL 185          
BLAST of CN187171 vs. ExPASy Swiss-Prot
Match: KAD_CORA7 (Adenylate kinase OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=adk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.352e-11
Identity = 43/133 (32.33%), Postives = 76/133 (57.14%), Query Frame = -2
Query:  350 GSENGTMIQNMIKEGKIVPSEVTIKLLQKAM-EESGNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYY-------EAKGKVRKID 715
            G+  G   ++ I  GK+VP++VT ++++  + ++   D FL+DGFPR  +     E +     ++ + VL F+ SE+ +  R+L R  GR DD  ETIR R  V+ E + P++++Y       +A+G V +I+
Sbjct:   42 GTPLGLEAKSYIDAGKLVPTDVTARMVEDRLNQDDAKDGFLLDGFPRTVQQADILEKLLSDKDLKLDGVLNFEVSEDVVVERMLAR--GRADDTEETIRTRLGVYREETFPLIEHYGDAIISIKAEGTVEEIN 172          
BLAST of CN187171 vs. ExPASy Swiss-Prot
Match: KAD_CAMJR (Adenylate kinase OS=Campylobacter jejuni (strain RM1221) GN=adk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.352e-11
Identity = 44/140 (31.43%), Postives = 70/140 (50.00%), Query Frame = -2
Query:  311 SGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEF----VLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVK 718
            SGSE G  I + I +G +VP +V I  +  A++ +     +IDG+PR+ E    F+ V   + E     V+    SEE  + R+L RN+G  DDN E    R KV+ E    ++ +Y+ K     ID  + +  +   +K
Sbjct:   45 SGSELGKTIDSFISKGNLVPLDVVINTIVCALKAAPTKTIIIDGYPRSVEQMMEFDKVLSEQNEICLKGVIEVRVSEEVAKERVLGRNRG-TDDNEEVFYNRMKVYTEPLNEILDFYQKKKLHFIIDGERAIEPIVADMK 183          
BLAST of CN187171 vs. ExPASy Swiss-Prot
Match: KAD_HELPH (Adenylate kinase OS=Helicobacter pylori (strain HPAG1) GN=adk PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.765e-11
Identity = 37/133 (27.82%), Postives = 70/133 (52.63%), Query Frame = -2
Query:  326 SENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVL----FFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 712
            +E G +I+    +G++VP E+ ++ +  A++ S     LIDG+PR+ E   A +     + E +L      + SE   + R+L R++G  DDN +    R +VFL+    +  +Y+AK   + I+  + + E+
Sbjct:   47 TERGLLIEKFTSQGELVPLEIVVETILSAIKSSSKRIILIDGYPRSVEQMQALDKELNAQNEVILKSVIEVEVSENTAKERVLGRSRG-ADDNEKVFHNRMRVFLDPLAEIQNFYKAKHLHKVINGERSIEEI 178          
BLAST of CN187171 vs. ExPASy Swiss-Prot
Match: KAD_CAMJJ (Adenylate kinase OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=adk PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.765e-11
Identity = 43/140 (30.71%), Postives = 70/140 (50.00%), Query Frame = -2
Query:  311 SGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEF----VLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVK 718
            SGSE G  I + I +G +VP +V +  +  A++ +     +IDG+PR+ E    F+ V   + E     V+    SEE  + R+L RN+G  DDN E    R KV+ E    ++ +Y+ K     ID  + +  +   +K
Sbjct:   45 SGSELGKTIDSFISKGNLVPLDVVVNTIVCALKAAPTKTIIIDGYPRSVEQMMEFDKVLSEQNEICLKGVIEVRVSEEVAKERVLGRNRG-ADDNEEVFYNRMKVYTEPLNEILDFYQKKKLHFIIDGERTIEPIVADMK 183          
BLAST of CN187171 vs. ExPASy Swiss-Prot
Match: KAD_CAMJ8 (Adenylate kinase OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=adk PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.765e-11
Identity = 43/140 (30.71%), Postives = 70/140 (50.00%), Query Frame = -2
Query:  311 SGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEF----VLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVK 718
            SGSE G  I + I +G +VP +V +  +  A++ +     +IDG+PR+ E    F+ V   + E     V+    SEE  + R+L RN+G  DDN E    R KV+ E    ++ +Y+ K     ID  + +  +   +K
Sbjct:   45 SGSELGKTIDSFISKGNLVPLDVVVNTIVCALKAAPTKTIIIDGYPRSVEQMMEFDKVLSEQNEICLKGVIEVRVSEEVAKERVLGRNRG-ADDNEEVFYNRMKVYTEPLNEILDFYQKKKLHFIIDGERTIEPIVADMK 183          
BLAST of CN187171 vs. ExPASy Swiss-Prot
Match: KAD2_CAEEL (Adenylate kinase 2, mitochondrial OS=Caenorhabditis elegans GN=let-754 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.765e-11
Identity = 54/183 (29.51%), Postives = 86/183 (46.99%), Query Frame = -2
Query:  278 SGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVT---KIEPEFVLFFDCSEEEMERRILNR----NQGRE-------------------------DDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV---FDAVKAVFTPKDEKAA 718
            SGSE G  ++  +  GK+V  EV  KL+++ +E+      F++DGFPR        + +    K   + V+ F+ +++ + RRI  R      GR                          DDN ET+RKR   + + ++P+V YY+  G    +DAAKP+ +V    D V A FT K E+ +
Sbjct:   67 SGSEFGKELKATMDAGKLVSDEVVCKLIEQKLEKPECKYGFILDGFPRTSGQAEKLDEILERRKTPLDTVVEFNIADDLLVRRITGRLFHIASGRSYHLEFKPPKVPMKDDLTGEPLIRRSDDNEETLRKRLVQYHQMTVPLVDYYKKHGVHVAVDAAKPMTDVKAHIDQVFAKFTQKKERVS 249          
BLAST of CN187171 vs. ExPASy Swiss-Prot
Match: KAD_RHIEC (Adenylate kinase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=adk PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.306e-11
Identity = 46/174 (26.44%), Postives = 84/174 (48.28%), Query Frame = -2
Query:  299 SGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRN------------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFT 718
            +G+E G   + ++  GK+V  E+ I ++ + +++    + F++DGFPR      A EA+ K   ++   V+ F   +EE+ RR+  R                               + R DDN ET+ KR +V+ + + P++ YY AKGK+R +D    + +V   V+A+ +
Sbjct:   41 AGTEVGKRAKAVMDAGKLVSDEIVIAIVSERIDQPDCANGFILDGFPRTLVQADATEAMLKAKGLDLSVVIEFRVDDEELVRRVDGRYTCAQCGTVYHDTDKVPVEEGVCDKCGSTHFKRRPDDNAETMIKRLEVYYKETSPLIGYYHAKGKLRPVDGMAEIDQVTAEVEAILS 214          
The following BLAST results are available for this feature:
BLAST of CN187171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
KAD1_SYNY31.035e-1129.66Adenylate kinase 1 OS=Synechocystis sp. (strain PC... [more]
KAD_SYNS91.352e-1127.54Adenylate kinase OS=Synechococcus sp. (strain CC99... [more]
KAD_SYNJB1.352e-1129.46Adenylate kinase OS=Synechococcus sp. GN=adk PE=3 ... [more]
KAD_CORA71.352e-1132.33Adenylate kinase OS=Corynebacterium aurimucosum (s... [more]
KAD_CAMJR1.352e-1131.43Adenylate kinase OS=Campylobacter jejuni (strain R... [more]
KAD_HELPH1.765e-1127.82Adenylate kinase OS=Helicobacter pylori (strain HP... [more]
KAD_CAMJJ1.765e-1130.71Adenylate kinase OS=Campylobacter jejuni subsp. je... [more]
KAD_CAMJ81.765e-1130.71Adenylate kinase OS=Campylobacter jejuni subsp. je... [more]
KAD2_CAEEL1.765e-1129.51Adenylate kinase 2, mitochondrial OS=Caenorhabditi... [more]
KAD_RHIEC2.306e-1126.44Adenylate kinase OS=Rhizobium etli (strain CFN 42 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0004A20_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0004A20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187171 ID=CN187171; Name=CN187171; organism=Citrus sinensis; type=EST; length=719bp
CTTTTTTGACCGTGAAATTCAATCAATTACTTTTTTTTTTTTTTAAAGCC
TTAATGCTGTTATTATTACTCTTGATCTTGCTATTACCCTCTCAATAACA
AGAATACATAGGCAAACAAGAATAAATATCATGATACACTATGAACTTCT
ATGACATTCTCGTAAAACATGGGGCATAATAACCTCATAATAATAAAGTA
CAATAATAGGCAGCAGCCAACAACAATACCACCACCTTGATATTAAATCT
GATACTCTGGACAGAGAAGACCTAAGCAGCAGCCTTCTCATCTTTTGGGG
TAAAAACAGCTTTAACAGCATCAAAAACCTCTGCAACAGGCTTTGCAGCA
TCAATCTTCCGAACTTTACCCTTAGCTTCATAATATTGAACCACAGGGAG
ACTAGATTCTAAGAAAACCTTAAACCGCTTCCTAATTGTCTCAACGTTAT
CATCTTCTCTTCCCTGATTCCTATTCAAAATGCGCCTCTCCATCTCCTCC
TCAGAACAGTCAAAAAACAGAACGAATTCTGGCTCAATTTTGGTAACAGC
TTCAAATGCAGCACGATTTTCCTCGTTTCTGGGAAAACCATCGATGAGAA
ATTTATCATTTCCACTTTCCTCCATTGCTTTTTGGAGAAGCTTAATTGTG
ACCTCTGAAGGAACGATTTTTCCCTCTTTAATCATGTTCTGAATCATGGT
TCCATTTTCAGAGCCAGAT
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