CK937243

Overview
NameCK937243
Unique NameCK937243
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937243 vs. ExPASy Swiss-Prot
Match: NDK_PROMM (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9313) GN=ndk PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.308e-44
Identity = 86/149 (57.72%), Postives = 107/149 (71.81%), Query Frame = 3
Query:   78 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIETGRNIIHGSDSVDSAQKEIALWFPDGPIN-WQSSLHPWIYE 521
            ME+TF+ IKPDGVQRGLVGEI+ RFE+KGF L GLK +T  R  A +HY     +PFF  L+++ITSGPV+AM+WEG+GV+ + R +IGAT P  + PGTIRGDLA+  GRN+IHGSD  D+AQ EI LWF    +N W  S   W  E
Sbjct:    3 MERTFVAIKPDGVQRGLVGEILGRFERKGFKLVGLKQVTPSRDLAGEHYGVHRERPFFAGLVDFITSGPVIAMVWEGDGVIASARKLIGATKPLDAEPGTIRGDLAVNIGRNVIHGSDGPDTAQFEINLWFSAEELNAWTPSDQSWRIE 151          
BLAST of CK937243 vs. ExPASy Swiss-Prot
Match: NDK_DESRM (Nucleoside diphosphate kinase OS=Desulfotomaculum reducens (strain MI-1) GN=ndk PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.308e-44
Identity = 81/149 (54.36%), Postives = 117/149 (78.52%), Query Frame = 3
Query:   78 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIETGRNIIHGSDSVDSAQKEIALWF-PDGPINWQSSLHPWIYE 521
            ME+T++M+KPDGVQRGL+G+II +FE+KG+ + GLK+M + R  AE+HY + + KPFF  L+++ITSGPVVAM+ EG+ VV T R ++GATNP ++APGTIR    ++ GRNIIHGSDS++SAQ+EI ++F  +  I++  ++  WIYE
Sbjct:    1 MERTYLMVKPDGVQRGLIGQIISKFEQKGYKIVGLKMMQISREVAERHYGEHAGKPFFNGLVDFITSGPVVAMVIEGKDVVTTAREMMGATNPLKAAPGTIRATFGVDVGRNIIHGSDSLESAQREIGIFFKSEELIDYDRAIDTWIYE 149          
BLAST of CK937243 vs. ExPASy Swiss-Prot
Match: NDK_BACSU (Nucleoside diphosphate kinase OS=Bacillus subtilis GN=ndk PE=1 SV=3)

HSP 1 Score: 178.718 bits (452), Expect = 2.308e-44
Identity = 83/148 (56.08%), Postives = 111/148 (75.00%), Query Frame = 3
Query:   78 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIETGRNIIHGSDSVDSAQKEIALWFPDGP-INWQSSLHPWIY 518
            ME+TFIM+KPDGVQR L+G+I+ RFE+KG  L G KLM V    AEKHY +   KPFFG L+E+ITSGPV AM+WEGE V++  R +IG TNP ++ PGTIRGD  +  G+NIIHGSDS++SA++EI ++F +   +++Q  +  WIY
Sbjct:    2 MEKTFIMVKPDGVQRQLIGDILSRFERKGLQLAGAKLMRVTEQMAEKHYAEHQGKPFFGELVEFITSGPVFAMVWEGENVIEVTRQLIGKTNPKEALPGTIRGDYGMFVGKNIIHGSDSLESAEREINIFFKNEELVSYQQLMAGWIY 149          
BLAST of CK937243 vs. ExPASy Swiss-Prot
Match: NDK_BACHD (Nucleoside diphosphate kinase OS=Bacillus halodurans GN=ndk PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.308e-44
Identity = 81/147 (55.10%), Postives = 111/147 (75.51%), Query Frame = 3
Query:   78 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIETGRNIIHGSDSVDSAQKEIALWFPDGPIN-WQSSLHPWI 515
            ME+T++MIKPDGVQR L+GEI+ RFEKKGF+L G KLMTV +  AE HY +   +PFFG L+++ITSGPV AM+WEGE V+ T R ++GATNPA + PGTIRGD  ++   N+IHGSDS +SA++EI ++F    +N +   ++ W+
Sbjct:    1 MERTYLMIKPDGVQRNLIGEIVSRFEKKGFTLIGAKLMTVTKEQAETHYAEHKERPFFGELVDFITSGPVFAMVWEGENVIATARKMMGATNPADAEPGTIRGDFGVQVAMNVIHGSDSPESAKREIDIFFDSSELNEYDKVVNRWV 147          
BLAST of CK937243 vs. ExPASy Swiss-Prot
Match: NDK_ASHGO (Nucleoside diphosphate kinase OS=Ashbya gossypii GN=NDK1 PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.308e-44
Identity = 82/148 (55.41%), Postives = 111/148 (75.00%), Query Frame = 3
Query:   81 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIETGRNIIHGSDSVDSAQKEIALWF-PDGPINWQSSLHPWIYE 521
            E+TFI IKPDGVQRGL+ +I+ RFE +G+ L G+KL+T      ++HY +   KPFF  ++ Y+TSGP++A +WEG+ VVK GR I+GATNP  SAPGTIRGD A++ GRN+ HGSDSV+SAQ+EI LWF  +  ++W+ +   WIYE
Sbjct:    4 ERTFIAIKPDGVQRGLISKILSRFESRGYKLVGIKLVTPTENLLKQHYAEHVEKPFFPKMLAYMTSGPILATVWEGKDVVKQGRVILGATNPLNSAPGTIRGDFALDMGRNVCHGSDSVESAQREIDLWFKKEELVDWKLNQLSWIYE 151          
BLAST of CK937243 vs. ExPASy Swiss-Prot
Match: NDK_PROM1 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain NATL1A) GN=ndk PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.014e-44
Identity = 84/149 (56.38%), Postives = 107/149 (71.81%), Query Frame = 3
Query:   78 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIETGRNIIHGSDSVDSAQKEIALWFPDGP-INWQSSLHPWIYE 521
            +E+TF+ IKPDGVQRGL+ EI+ RFE KGF L GLK +T  +  AEKHY     +PFF  L+++ITSGPVVAM+WEGEGV+ + R +IGAT P ++ PGTIRGDLA+  GRN+IHGSD  D+A  EI LWF +   ++W  S   W  E
Sbjct:    3 LERTFVAIKPDGVQRGLIAEILGRFETKGFKLVGLKQLTPSKELAEKHYGVHKDRPFFSGLVDFITSGPVVAMVWEGEGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDGSDTAVFEINLWFQENELVDWNPSDQAWRVE 151          
BLAST of CK937243 vs. ExPASy Swiss-Prot
Match: NDK_BACHK (Nucleoside diphosphate kinase OS=Bacillus thuringiensis subsp. konkukian GN=ndk PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.014e-44
Identity = 80/148 (54.05%), Postives = 111/148 (75.00%), Query Frame = 3
Query:   78 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIETGRNIIHGSDSVDSAQKEIALWFPDGP-INWQSSLHPWIY 518
            ME+TF+M+KPDGVQR  +GEI+ RFEKKGF L G KLM V    A +HY + + KPFFG L+++ITSGPV AM+W+GEGVV T R ++G T P ++APGTIRGD  +   +NIIHGSDS++SA++EI ++F +   +++   ++ WIY
Sbjct:    1 MEKTFLMVKPDGVQRAFIGEIVARFEKKGFQLVGAKLMQVTPEIAGQHYAEHTEKPFFGELVDFITSGPVFAMVWQGEGVVDTARNMMGKTRPHEAAPGTIRGDFGVTVAKNIIHGSDSLESAEREIGIFFKEEELVDYSKLMNEWIY 148          
BLAST of CK937243 vs. ExPASy Swiss-Prot
Match: NDK_BACCZ (Nucleoside diphosphate kinase OS=Bacillus cereus (strain ZK / E33L) GN=ndk PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.014e-44
Identity = 80/148 (54.05%), Postives = 111/148 (75.00%), Query Frame = 3
Query:   78 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIETGRNIIHGSDSVDSAQKEIALWFPDGP-INWQSSLHPWIY 518
            ME+TF+M+KPDGVQR  +GEI+ RFEKKGF L G KLM V    A +HY + + KPFFG L+++ITSGPV AM+W+GEGVV T R ++G T P ++APGTIRGD  +   +NIIHGSDS++SA++EI ++F +   +++   ++ WIY
Sbjct:    1 MEKTFLMVKPDGVQRAFIGEIVARFEKKGFQLVGAKLMQVTPEIAGQHYAEHTEKPFFGELVDFITSGPVFAMVWQGEGVVDTARNMMGKTRPHEAAPGTIRGDFGVTVAKNIIHGSDSLESAEREIGIFFKEEELVDYSKLMNEWIY 148          
BLAST of CK937243 vs. ExPASy Swiss-Prot
Match: NDK_BACAN (Nucleoside diphosphate kinase OS=Bacillus anthracis GN=ndk PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.014e-44
Identity = 80/148 (54.05%), Postives = 111/148 (75.00%), Query Frame = 3
Query:   78 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIETGRNIIHGSDSVDSAQKEIALWFPDGP-INWQSSLHPWIY 518
            ME+TF+M+KPDGVQR  +GEI+ RFEKKGF L G KLM V    A +HY + + KPFFG L+++ITSGPV AM+W+GEGVV T R ++G T P ++APGTIRGD  +   +NIIHGSDS++SA++EI ++F +   +++   ++ WIY
Sbjct:    1 MEKTFLMVKPDGVQRAFIGEIVARFEKKGFQLVGAKLMQVTPEIAGQHYAEHTEKPFFGELVDFITSGPVFAMVWQGEGVVDTARNMMGKTRPHEAAPGTIRGDFGVTVAKNIIHGSDSLESAEREIGIFFKEEELVDYSKLMNEWIY 148          
BLAST of CK937243 vs. ExPASy Swiss-Prot
Match: NDK_PROMT (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain NATL2A) GN=ndk PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 3.936e-44
Identity = 83/149 (55.70%), Postives = 107/149 (71.81%), Query Frame = 3
Query:   78 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIETGRNIIHGSDSVDSAQKEIALWFPDGP-INWQSSLHPWIYE 521
            +E+TF+ IKPDGVQRGL+ EI+ RFE KGF L GLK +T  +  AEKHY     +PFF  L+++ITSGPV+AM+WEGEGV+ + R +IGAT P ++ PGTIRGDLA+  GRN+IHGSD  D+A  EI LWF +   ++W  S   W  E
Sbjct:    3 LERTFVAIKPDGVQRGLIAEILGRFETKGFKLVGLKQLTPSKELAEKHYGVHKDRPFFSGLVDFITSGPVIAMVWEGEGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDGSDTAVFEINLWFQENELVDWNPSDQAWRVE 151          
The following BLAST results are available for this feature:
BLAST of CK937243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_PROMM2.308e-4457.72Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]
NDK_DESRM2.308e-4454.36Nucleoside diphosphate kinase OS=Desulfotomaculum ... [more]
NDK_BACSU2.308e-4456.08Nucleoside diphosphate kinase OS=Bacillus subtilis... [more]
NDK_BACHD2.308e-4455.10Nucleoside diphosphate kinase OS=Bacillus halodura... [more]
NDK_ASHGO2.308e-4455.41Nucleoside diphosphate kinase OS=Ashbya gossypii G... [more]
NDK_PROM13.014e-4456.38Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]
NDK_BACHK3.014e-4454.05Nucleoside diphosphate kinase OS=Bacillus thuringi... [more]
NDK_BACCZ3.014e-4454.05Nucleoside diphosphate kinase OS=Bacillus cereus (... [more]
NDK_BACAN3.014e-4454.05Nucleoside diphosphate kinase OS=Bacillus anthraci... [more]
NDK_PROMT3.936e-4455.70Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004512_E02 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIIF_E02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937243 ID=CK937243; Name=CK937243; organism=Citrus sinensis; type=EST; length=658bp
AGCTCATTCTCTCGCATGTGTGCTGTGCTATTTCACTCAATTCTCAAAAC
AAGTTGGTTTCTCTGAATCTCAAAGAAATGGAACAAACTTTCATCATGAT
CAAGCCCGATGGGGTCCAAAGGGGCCTTGTTGGTGAAATCATCATCAGAT
TTGAGAAGAAGGGTTTCTCCTTGAAGGGTTTGAAGCTTATGACTGTGGAC
CGCCCTTTTGCTGAGAAGCACTATGAGGATTTGTCATCGAAGCCTTTCTT
TGGTTCTCTGATTGAGTACATTACCTCTGGTCCTGTTGTTGCTATGATTT
GGGAGGGTGAAGGTGTTGTTAAGACTGGCCGCACTATTATTGGAGCCACC
AACCCTGCGCAGTCTGCTCCTGGAACCATCCGAGGTGATTTGGCTATCGA
GACGGGCAGGAATATCATCCATGGAAGTGACTCAGTTGACAGTGCCCAGA
AAGAAATCGCCTTGTGGTTCCCTGATGGCCCTATTAACTGGCAGAGCAGC
CTTCACCCTTGGATCTATGAGTAAACTAATGTTTGGTTGAGGAGCCTAAT
TGTTCCTGNAGTTAGACTTATCCCTATCCCTATCCCTATTTCCTTATTTA
TGGTTACTCCTTGTTGGTGAACTGTTATGAACTATTGAGTTAAATTGAGA
CCAATCCT
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