CK937233

Overview
NameCK937233
Unique NameCK937233
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length761
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937233 vs. ExPASy Swiss-Prot
Match: GL11_ARATH (Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana GN=GLP7 PE=2 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 6.490e-31
Identity = 75/190 (39.47%), Postives = 111/190 (58.42%), Query Frame = 2
Query:  125 TDPGHLQDVCVAINDPK-DGVFVNGKFCKDPKLARAEDFFFSGLG*PGNTANR-LGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAA-AYSALNSQFPGEVTIADAVFGANPSINPDFLGKAFQLD 685
            +DP  LQD CV+        +F+NGK CKDP  A   DF  S L  PGNT  +   ++ T      +PGLNT+G++  R+D+   G  PPH+HPRASE+ + L+G L VGFV +   +  +  + L+ G+ FVFP+GLIHF +NI   ++A A S L+SQ PG   ++ + F + P    + L  A+ ++
Sbjct:   18 SDPDPLQDYCVSPPPSSHQQIFLNGKLCKDPTQASVSDFSTSALSRPGNTKTKPFMINVTVTTTANLPGLNTVGLTMARLDFGGSGVVPPHVHPRASEVTVCLDGVLLVGFVDT---SGRVFTQELHPGETFVFPKGLIHFLYNIDTVSSALAVSGLSSQNPGTQIVSLSSFISKPPFLVEVLKSAYDIN 204          
BLAST of CK937233 vs. ExPASy Swiss-Prot
Match: GL24_ORYSJ (Germin-like protein 2-4 OS=Oryza sativa subsp. japonica GN=Os02g0532500 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.107e-30
Identity = 83/201 (41.29%), Postives = 106/201 (52.74%), Query Frame = 2
Query:  128 DPGHLQDVCV---AINDPKDGVFVNGKFCKDPKLARAEDFFFSGLG*PGNTANRLGVDETDANVEQIPGLNTLGISAFRIDY-APYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 718
            DP  +QD CV       P +   +    C+ P    A DF FSG+   GN +   G         Q PGL+TLG+S  R D  A  G  PPH HPRA+E  LVL G +Y GFV S      L AKVL +G+V VFP+ ++HFQ N+G T A  Y A NS+ PG V I   VFG+   I    L +AF L P  ++ L+ +F
Sbjct:   24 DPDAVQDFCVPDAGRGRPVELAMLPAYPCRSPANLTAGDFAFSGVRAAGNFSPETGFAGVSVTPAQFPGLHTLGMSFARADLSAAGGVNPPHYHPRATETALVLAGRVYAGFVDS---GGRLFAKVLEQGEVMVFPRAMVHFQLNVGDTPATVYGAFNSENPGIVRIPATVFGS--GIREAVLERAFGLTPAELRRLEKRF 219          
BLAST of CK937233 vs. ExPASy Swiss-Prot
Match: AB19A_PRUPE (Auxin-binding protein ABP19a OS=Prunus persica GN=ABP19A PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.446e-30
Identity = 81/190 (42.63%), Postives = 103/190 (54.21%), Query Frame = 2
Query:  140 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLG*PGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAFQLDPKIVKDLQ 709
            +QD CVA     DG    G  CK P      DF +SGLG  GNT N +    T A   Q PG+N LGIS  R+D  P G  P H HP ASE+ LV++GT+  GFV SD   NT   K L KGD+ VFPQGL+HFQ N G T A A+ + +S  PG   +  A+F     +  + + +   LD   +K L+
Sbjct:   20 VQDFCVADYKAPDGPA--GYSCKKPAKVTINDFVYSGLGIAGNTTNIIKAAVTPAFAAQFPGVNGLGISLARLDLGPGGVIPFHTHPGASEVLLVVQGTIIAGFVASD---NTPYLKTLKKGDIMVFPQGLLHFQVNGGGTPALAFPSFSSPSPGLQILDFALF--KNDLPTELIAQTTFLDAAQIKKLK 202          
BLAST of CK937233 vs. ExPASy Swiss-Prot
Match: GL31_ARATH (Germin-like protein subfamily 3 member 1 OS=Arabidopsis thaliana GN=GLP1 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.175e-30
Identity = 84/190 (44.21%), Postives = 103/190 (54.21%), Query Frame = 2
Query:  140 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLG*PGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAFQLDPKIVKDLQ 709
            +QD CVA  + K      G  C  P   +A DF FSGLG PGNT N +    T A   Q PGLN LG+S  R+D AP G  P H HP ASE+  VL G++  GFV+S    N +  + L  G V VFPQGL+HFQ N GK++A+A    NS  PG + I D    AN       +G  F LD   VK L+
Sbjct:   19 VQDFCVA--NLKRAETPAGYPCIRPIHVKATDFVFSGLGTPGNTTNIINAAVTPAFAAQFPGLNGLGLSTARLDLAPKGVIPMHTHPGASEVLFVLTGSITAGFVSS---ANAVYVQTLKPGQVMVFPQGLLHFQINAGKSSASAVVTFNSANPG-LQILDFALFANSLPTELVVGTTF-LDATTVKKLK 201          
BLAST of CK937233 vs. ExPASy Swiss-Prot
Match: ABP20_PRUPE (Auxin-binding protein ABP20 OS=Prunus persica GN=ABP20 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.727e-29
Identity = 75/164 (45.73%), Postives = 95/164 (57.93%), Query Frame = 2
Query:  140 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLG*PGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADAVF 631
            +QD CVA     +G    G  CK P   +  DF FSGLG  GNT+N +    T A V Q PG+N LGIS  R+D A  G  P H HP ASE+ +V +GT+  GFV SD   NT   + L KGD+ VFPQGL+HFQ N G+  A A+++  S  PG   +  A+F
Sbjct:   25 VQDFCVADLAAPEGPA--GFSCKKPASVKVNDFVFSGLGIAGNTSNIIKAAVTPAFVAQFPGVNGLGISIARLDLAVGGVVPFHTHPGASEVLIVAQGTICAGFVASD---NTPYLQTLEKGDIMVFPQGLLHFQVNGGEAPALAFASFGSASPGLQILDFALF 183          
BLAST of CK937233 vs. ExPASy Swiss-Prot
Match: GL33_ARATH (Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana GN=GER3 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.353e-28
Identity = 72/164 (43.90%), Postives = 94/164 (57.32%), Query Frame = 2
Query:  140 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLG*PGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADAVF 631
            +QD CVA  DPK     +G  CK+P      DF F+GLG  GNT+N +    T A      G+N LG+S  R+D A  G  P H HP ASE+ +V++GT+  GF++S    N +  K LN+GD  VFPQGL+HFQ N GK  A A+ A  S  PG   +  A+F
Sbjct:   22 VQDFCVA--DPKGPQSPSGYSCKNPDQVTENDFAFTGLGTAGNTSNIIKAAVTPAFAPAYAGINGLGVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFISS---ANKVYLKTLNRGDSMVFPQGLLHFQLNSGKGPALAFVAFGSSSPGLQILPFALF 180          
BLAST of CK937233 vs. ExPASy Swiss-Prot
Match: GLP1_BRANA (Germin-like protein 1 OS=Brassica napus GN=GER1 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.716e-28
Identity = 81/190 (42.63%), Postives = 104/190 (54.74%), Query Frame = 2
Query:  140 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLG*PGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSINPDFLGKAFQLDPKIVKDLQ 709
            +QD CVA  + K      G  C  P   +A DF FS LG PGNT N +    T   V Q P LN LGIS  R+D AP G  P H HP ASE+  VL+G++  GF++S    N++  + L  G V VFPQGL+HFQ N GKT AAA    +S  PG + I D    AN +++ + +     L P  VK L+
Sbjct:   19 VQDFCVA--NLKRAETPAGYPCIRPIHVKASDFVFS-LGTPGNTTNIISAAVTPGFVAQFPALNGLGISTARLDLAPKGVIPMHTHPGASEVLFVLDGSITAGFISS---ANSVYVQTLKPGQVMVFPQGLLHFQINAGKTPAAALVTFSSASPG-LQILDFALFAN-TLSTELVSATTFLPPATVKTLK 200          
BLAST of CK937233 vs. ExPASy Swiss-Prot
Match: GLP1_SINAL (Germin-like protein 1 OS=Sinapis alba GN=GLP1 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.771e-28
Identity = 72/164 (43.90%), Postives = 93/164 (56.71%), Query Frame = 2
Query:  140 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLG*PGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADAVF 631
            +QD CVA  DPK     +G  CK+P      DF FSGLG  GNT+N +    T A      GLN L +S  R+D A  G  P H HP ASE+ +V++GT+  GF++S    N +  K L++GD  VFPQGL+HFQ N GK  A A+ A  S  PG   +  A+F
Sbjct:   22 VQDFCVA--DPKGPQNPSGYSCKNPDQVTENDFAFSGLGKAGNTSNVIKAAVTPAFAPAFAGLNGLDVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFISS---ANKVYLKTLSRGDSMVFPQGLLHFQLNSGKGPALAFVAFGSSSPGLQILPFALF 180          
BLAST of CK937233 vs. ExPASy Swiss-Prot
Match: GL34_ARATH (Germin-like protein subfamily 3 member 4 OS=Arabidopsis thaliana GN=At5g61750 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.496e-27
Identity = 72/169 (42.60%), Postives = 96/169 (56.80%), Query Frame = 2
Query:  128 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLG*PGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADAVFG 634
            D  ++QD C      +   F+NG  CK+P    A+DF  + L   G+T N L  + T     + PGLNTLG+S  R D    G  P H HPR+SE+  V++G ++ GFV +   NN +   VL KGDVFVFP+GL+HF  + G   A A+S  NSQ PG V I + VFG
Sbjct:   19 DSDNMQDTCPTAPGEQSIFFINGYPCKNPTKITAQDFKSTKLTEAGDTDNYLQSNVTLLTALEFPGLNTLGLSVSRTDLERDGSVPFHSHPRSSEMLFVVKGVVFAGFVDT---NNKIFQTVLQKGDVFVFPKGLLHFCLSGGFEPATAFSFYNSQNPGVVNIGE-VFG 183          
BLAST of CK937233 vs. ExPASy Swiss-Prot
Match: GL111_ORYSJ (Germin-like protein 11-1 OS=Oryza sativa subsp. japonica GN=Os11g0537300 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.698e-27
Identity = 71/175 (40.57%), Postives = 90/175 (51.43%), Query Frame = 2
Query:  125 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLG*PGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADAVFGANPSI 649
            +D   LQDVC      +  +F+NG FCK P    A DF    L   G+  N +          + PGLNTLGIS  R D A  G   PH HPRASE+  V  G++  GF  +      L  K L +GDVF+FP+GL+HF  N G   A  +S LNSQ PG V I  A+F  +  +
Sbjct:   23 SDSPPLQDVCPMAPQGERKLFMNGFFCKSPSTIMASDFKTLLLNHAGDLDNMVRSSANIITATEFPGLNTLGISMARTDIAVSGAVLPHSHPRASEMMFVHSGSVVAGFFDT---KGKLFQKTLAEGDVFIFPRGLVHFIMNYGFGLATTFSVLNSQNPGVVGITHAMFAPDSEV 194          
The following BLAST results are available for this feature:
BLAST of CK937233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL11_ARATH6.490e-3139.47Germin-like protein subfamily 1 member 1 OS=Arabid... [more]
GL24_ORYSJ1.107e-3041.29Germin-like protein 2-4 OS=Oryza sativa subsp. jap... [more]
AB19A_PRUPE1.446e-3042.63Auxin-binding protein ABP19a OS=Prunus persica GN=... [more]
GL31_ARATH7.175e-3044.21Germin-like protein subfamily 3 member 1 OS=Arabid... [more]
ABP20_PRUPE2.727e-2945.73Auxin-binding protein ABP20 OS=Prunus persica GN=A... [more]
GL33_ARATH1.353e-2843.90Germin-like protein subfamily 3 member 3 OS=Arabid... [more]
GLP1_BRANA6.716e-2842.63Germin-like protein 1 OS=Brassica napus GN=GER1 PE... [more]
GLP1_SINAL8.771e-2843.90Germin-like protein 1 OS=Sinapis alba GN=GLP1 PE=2... [more]
GL34_ARATH1.496e-2742.60Germin-like protein subfamily 3 member 4 OS=Arabid... [more]
GL111_ORYSJ9.698e-2740.57Germin-like protein 11-1 OS=Oryza sativa subsp. ja... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004512_E12 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIIF_E12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937233 ID=CK937233; Name=CK937233; organism=Citrus sinensis; type=EST; length=761bp
GGGGAATCACAACACTTGATTAAAGTTTGAGATAGGCACATCCTGTGACT
TAATCACCATGAAGGTAATTCAATTTCTTATAGGTTTTGCCCTCTTGGCT
TTGGCTTCTTCTTTGGCCTCTGCCACTGACCCTGGCCATCTTCAAGATGT
CTGTGTAGCCATCAATGACCCCAAGGATGGTGTGTTTGTGAATGGGAAGT
TCTGCAAGGACCCCAAGCTTGCGAGAGCAGAAGATTTCTTCTTCTCAGGG
CTAGGCTAGCCTGGAAACACAGCAAATCGACTTGGTGTTGATGAAACAGA
TGCAAATGTTGAGCAAATTCCAGGACTCAACACCCTTGGCATATCAGCAT
TCCGTATTGACTATGCACCATATGGCCAAAGGCCACCTCACATTCACCCC
CGTGCCAGCGAAATCTTCTTAGTCCTGGAAGGAACTCTTTATGTCGGTTT
TGTGACATCAGACCAACTGAATAACACACTCATCGCAAAAGTTCTAAATA
AGGGAGATGTTTTTGTGTTTCCACAAGGTTTGATTCACTTCCAATTCAAC
ATTGGAAAAACAAATGCTGCTGCCTATTCTGCTCTAAACAGCCAATTCCC
GGGTGAAGTTACCATAGCCGACGCAGTCTTTGGAGCCAATCCTTCAATCA
ATCCCGATTTTCTTGGCAAGGCATTCCAGTTGGACCCAAAGATAGTGAAA
GATCTTCAAAATAAGTTCATTAATGGCAATTAGGAGAAGGAATTAATGAG
CTTTAATATAA
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