CK937220

Overview
NameCK937220
Unique NameCK937220
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937220 vs. ExPASy Swiss-Prot
Match: GDL50_ARATH (GDSL esterase/lipase At3g09930 OS=Arabidopsis thaliana GN=At3g09930 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.594e-18
Identity = 71/240 (29.58%), Postives = 117/240 (48.75%), Query Frame = 1
Query:   94 MDQSSSIFASWLVIFFSLFVTLASVVPQ------AEARAFFVFGDSLVDNGNNDYLATTARADSY--PYGIDYPTHRPTGRFSNGLNIPDLISEQIGMESTLPYLSPELTG-QRLLVGANFASAGIGILNDTGFQFINIIRISKQIEYFQQYQQRVSALIGAEQTERLVNQALVLITLGGNDFVNNYYLVPFSTRSRQFPLPDYVVYLISEYRKILARIYELGARRVLVTGTGPLGCVPA 786
            M+    + + +L  F S F+   S  PQ            FVFGDS  D GN       + +DS+  PYGI +P  +P+GRFS+G    D ++  +G++S +PY   +  G +RLL G N+A  G G+         N   ++ QI+YF    QRV A  G   +   +  +L L+++ GND     Y    + +     LP ++  ++ +      RI++LG  ++++    PLGC+P+
Sbjct:    1 MELPKLLISLFLFSFSSFFLGAESDYPQHSNLKRLRPNRLFVFGDSYADTGN----IRKSLSDSWKIPYGITFP-QKPSGRFSDGRVATDFLARYLGIKSPIPYTWKDYAGKERLLYGMNYAYGGTGVFKTKDNPLPN---MTTQIDYF----QRVLA-AGNIYSPSDLPSSLALVSVAGND-----YATFLALKRPLTELPAFMKQVVDQIAVNAMRIHKLGVNKIVIPSMQPLGCLPS 222          
BLAST of CK937220 vs. ExPASy Swiss-Prot
Match: GDL76_ARATH (GDSL esterase/lipase At5g14450 OS=Arabidopsis thaliana GN=At5g14450 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.719e-18
Identity = 86/249 (34.54%), Postives = 117/249 (46.99%), Query Frame = 1
Query:  103 SSSIFASWLVIFFSLFVTLASVVPQAEARAFFVFGDSLVDNGNNDYLATTARADSYPYGIDYPTHRPTGRFSNGLNIPDLISEQIGMESTLPYLSPELT--GQRLLVGANFASAGIGIL--NDTGFQF-INIIRISKQIEYFQQYQQRVSALIGAE-----QTERLVNQ-----ALVLITLGGNDFVNNYYLVPFSTRSRQFPLPDYVVYLISEYRKILARIYELGARRVLVTGTGPLGCVPAELAQRG 804
            SS++F SWL++      T  SV P     A + FGDS  D G    ++        PYG  +  HRPTGR S+G    D I+E++G    LPYLS  L   G     GANFA+ G  I   N+T FQ+ I+   +  QI  F Q++ R SAL+  +       E+L  Q     AL    +G ND    +  +  S    +  +PD V +L S  R I    Y+ G R   V  TGP GC+P  +   G
Sbjct:   13 SSTVF-SWLLLCLFAVTTSVSVQPTCTFPAIYNFGDSNSDTGG---ISAAFEPIRDPYGQGF-FHRPTGRDSDGRLTIDFIAERLG----LPYLSAYLNSLGSNFRHGANFATGGSTIRRQNETIFQYGISPFSLDMQIAQFDQFKAR-SALLFTQIKSRYDREKLPRQEEFAKALYTFDIGQNDLSVGFRTM--SVDQLKATIPDIVNHLASAVRNI----YQQGGRTFWVHNTGPFGCLPVNMFYMG 245          
BLAST of CK937220 vs. ExPASy Swiss-Prot
Match: GDL71_ARATH (GDSL esterase/lipase At5g03610 OS=Arabidopsis thaliana GN=At5g03610 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.006e-17
Identity = 59/197 (29.95%), Postives = 100/197 (50.76%), Query Frame = 1
Query:  196 FVFGDSLVDNGNNDYLATTARADSYPYGIDYPTHRPTGRFSNGLNIPDLISEQIGMESTLPYLSPELTG-QRLLVGANFASAGIGILNDTGFQFINIIRISKQIEYFQQYQQRVSALIGAEQTERLVNQALVLITLGGNDFVNNYYLVPFSTRSRQFPLPDYVVYLISEYRKILARIYELGARRVLVTGTGPLGCVP 783
            FVFGDS  D GN     +++    +PYGI +P  +P GRFS+G    D +++ +G++S +PY   +  G +RL  G NFA  G G+ N        +  ++ QI+ FQ            E T      ++ L+++ GND+ N    +  +  + +FP   ++  ++ +    L RI+ LG +++ V    PLGC+P
Sbjct:   45 FVFGDSYADTGNIKKAFSSSW--KFPYGITFPG-KPAGRFSDGRVATDFLAKFVGIKSPIPYFWKDYAGKKRLQYGMNFAYGGTGVFNTQ----TPLPNMTTQIDIFQNILTTGDIYYPPELT-----SSVALVSVAGNDYSN---FIALNRPASEFPA--FIKQVVDQTEVNLRRIHALGVKKIAVPSLQPLGCLP 224          
BLAST of CK937220 vs. ExPASy Swiss-Prot
Match: GDL21_ARATH (GDSL esterase/lipase At1g54030 OS=Arabidopsis thaliana GN=At1g54030 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.324e-16
Identity = 73/263 (27.76%), Postives = 122/263 (46.39%), Query Frame = 1
Query:   91 IMDQSSSIFASWLVIFFSLFVTLASVVPQAEARAFFVFGDSLVDNGNNDYLATTARADSYP-YGIDYPTHRPTGRFSNGLNIPDLISEQIGMESTLPYLSPELTGQRLLVGANFASAGIGILNDTGFQFINIIRISKQIEYFQQYQQRVSALIGAEQTERLVNQALVLITLGGNDFVNNYYLVPFSTRSRQFPLPDYVVYLISEYRKILARIYELGARRVLVTGTGPLGCVPAELAQRGVNGECSVELQRAADLFNPQLVQML 876
            + D S +I  S   + F L +     V  + A+  FVFGD L D GN  +L+      S+P YG+     + TGR+S+G  +PD +++ +G+    P L   LT      GANFA A   +L          + +S+Q++ F + + +         T +  ++A+ LI +G +D+++     P  + +++    D V+  I    K+   +Y  G R+       PLGC+PA     G   EC       A L N +L+Q+L
Sbjct:   21 LSDLSMAILKSHFFLLFPLLLLHFHTV--SFAQTLFVFGDGLYDAGNKQFLSQNRVDASFPPYGVT--VGQATGRWSDGSIVPDYLAKFMGIPKISPIL---LTTADFSHGANFAIADATVLGSPP----ETMTLSQQVKKFSENKNK--------WTNQTRSEAIYLIYIGSDDYLSYAKSNPSPSDTQKQAFVDQVITTIKAEIKV---VYGSGGRKFAFQNLAPLGCLPAVKQASGNVQECVKLPSEMAALHNKKLLQLL 261          
BLAST of CK937220 vs. ExPASy Swiss-Prot
Match: GDL1_CARPA (GDSL esterase/lipase OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.675e-15
Identity = 65/232 (28.02%), Postives = 106/232 (45.69%), Query Frame = 1
Query:   94 MDQSSSIFASWLVIFFSLFVTLASVVPQAEARAFFVFGDSLVDNGNNDYLATTARADSYPYG--IDYPTHRPTGRFSNGLNIPDLISEQIGMESTLPYLSPELTGQRLLVGANFASAGIGILNDTGFQFINIIRISKQIEYFQQYQQRVSALIGAEQTERLVNQALVLITLGGNDFVNNYYLVPFSTRSRQFPLPDYVVYLISEYRKILARIYELGARRVLVTGTGPLGCVP 783
            M++ S  F    ++   L + ++       A+  F+FGDSL DNGN  +LAT   +  +PYG  ID+    P GR+S+G  +PD I+E +G+    P L           G  FA+A   IL          + +  Q++ F Q        I +  T+    + + +  +G ND++N       +T  +Q     +V  +I++ +  L  IY LG R+       PLGC+P
Sbjct:    1 MEKPSGQFLGLSLLLLPLLLPIS-----CNAQQLFIFGDSLYDNGNKPFLATDVPSTFWPYGLSIDF----PNGRWSDGRIVPDFIAEFLGIPFPPPVLD---RSANFSSGVTFATADATILGTPP----QTLTLGDQVKAFAQ--------IKSTWTDAQRQKGIYMFYIGANDYLNYTNANLNATAQQQ---EAFVSQVIAKLKDQLLAIYGLGGRKFAFQNLAPLGCLP 205          
BLAST of CK937220 vs. ExPASy Swiss-Prot
Match: GDL11_ARATH (GDSL esterase/lipase At1g28650 OS=Arabidopsis thaliana GN=At1g28650 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.382e-14
Identity = 72/250 (28.80%), Postives = 117/250 (46.80%), Query Frame = 1
Query:   82 STIIMDQSSSIFASWLVIFFSLFVTLASVVPQAEARAFFVFGDSLVDNGNNDYLATT---ARADSYPYGIDYPTHRPTGRFSNGLNIPDLISEQIGMESTLPYLSPELTGQRLLV--GANFASAGIGILNDTGF--------QFINIIRISKQIEYFQQYQQRVSALIGAEQTERLVNQALVLITLGGNDFVNNYYLVPFSTRSRQFPLPDYVVYLISEYRKILARIYELGARRVLVTGTGPLGCVPAEL 792
            +T++M  +S I +  L+++++  V  +S       ++   FGDS+ D GN  +L+      +A   PYG  +  H P+GR+S+G  + D I+E +G    LPY+ P    Q +    G NFA  G   L D  F         F N I +S Q+  F+Q    + A    +  E L +  +++  +GGND+  NY   PF        + + V  +I      +  + +LG +  LV G  P+GC  A L
Sbjct:    3 TTLLM--ASLIVSFLLILYYTTIVVASSESRCRRYKSIISFGDSIADTGNYVHLSNVNNLPQAAFLPYGESF-FHPPSGRYSDGRLVIDFIAEFLG----LPYVPPYFGSQNVSFNQGINFAVYGATAL-DRAFLVKQGIKSDFTN-ISLSVQLNTFKQILPNLCASSTRDCREMLGDSLILMGEIGGNDY--NY---PFFEGKSINEIKELVPLIIKAISSAIVDLIDLGGKTFLVPGNFPIGCSTAYL 238          
BLAST of CK937220 vs. ExPASy Swiss-Prot
Match: GDL60_ARATH (GDSL esterase/lipase At3g62280 OS=Arabidopsis thaliana GN=At3g62280 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.633e-13
Identity = 69/236 (29.24%), Postives = 102/236 (43.22%), Query Frame = 1
Query:  106 SSIFASWLVIFFSLFVTLASVVPQAEARAFFV--FGDSLVDNGNNDYLATTARADSYPYGIDYPTHRPTGRFSNGLNIPDLISEQIGMESTLPYLSPELTGQRLLVGANFASAGIGILNDTGFQFINIIRISKQIEYFQQYQQRVSALIGAEQTERL----VNQALVLITLGGNDFVNNYYLVPFSTRSRQFPLPDYVVYLISEYRKILARIYELGARRVLVTGTGPLGCVPAELA 795
            SS+   +LV+  SL V   S       +   +  FGDS  D G    LA        P+GI +  HR TGR  +G  I D   E + M    PYL  +        G NFA +G   L    F       ++ QI  F  ++ R   LI + + + +       AL +I +G ND +    L  + +     P+ + +  ++ E +K +  +Y  G R+  V  TGPLGC P ELA
Sbjct:    6 SSLQCFFLVLCLSLLVCSNSETSYKSNKKPILINFGDSNSDTGG--VLAGVGLPIGLPHGITF-FHRGTGRLGDGRLIVDFYCEHLKMTYLSPYL--DSLSPNFKRGVNFAVSGATALPIFSFP------LAIQIRQFVHFKNRSQELISSGRRDLIDDNGFRNALYMIDIGQNDLL----LALYDSNLTYAPVVEKIPSMLLEIKKAIQTVYLYGGRKFWVHNTGPLGCAPKELA 226          
BLAST of CK937220 vs. ExPASy Swiss-Prot
Match: LIP4_ARATH (GDSL esterase/lipase LIP-4 OS=Arabidopsis thaliana GN=LIP4 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.439e-13
Identity = 76/277 (27.44%), Postives = 118/277 (42.60%), Query Frame = 1
Query:  112 IFASWLVIFFSLFVTLASVVPQAEARA--------FFVFGDSLVDNGNNDYLATTARADSYPYGIDYPTHRPTGRFSNGLNIPDLISEQIGMESTLPYLSPELTGQRLLVGANFASAGIGILNDTGFQFINIIRISKQIEYFQQYQQRVSALIGAEQTERLV-------NQALVLITLGGNDFVNNYYLVPFSTRSRQFPLPDYVVYLISEYRKILARIYELGARRVLVTGTGPLGCVPAELA--------QRGVNGECSVELQRAADLFNPQLVQM 873
            ++++    FF   V+LA ++ +  +RA         F FGDS  D G    +A       +P G  +   R TGR S+G  + D + + +      PYL   L   R   GANFA AG   L       +NI     Q++ F  ++ R   L  +  + + +         AL +I +G ND   +     F+  +        +  +I+E +  + R+Y+ G RR  +  TGPLGC+P +L+        Q G    C V    AA LFN  L  M
Sbjct:    6 LYSNTFSFFFITLVSLALLILRQPSRAASCTARPVIFNFGDSNSDTGG--LVAGLGYPIGFPNGRLF-FRRSTGRLSDGRLLIDFLCQSLNTSLLRPYLD-SLGRTRFQNGANFAIAGSPTLPKNVPFSLNI-----QVKQFSHFKSRSLELASSSNSLKGMFISNNGFKNALYMIDIGQNDIARS-----FARGNSYSQTVKLIPQIITEIKSSIKRLYDEGGRRFWIHNTGPLGCLPQKLSMVKSKDLDQHG----CLVSYNSAATLFNQGLDHM 264          
BLAST of CK937220 vs. ExPASy Swiss-Prot
Match: GDL9_ARATH (GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana GN=At1g28600 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.492e-13
Identity = 67/231 (29.00%), Postives = 106/231 (45.89%), Query Frame = 1
Query:  127 LVIFFSLFVTL-ASVVPQAEARAFFVFGDSLVDNGN------NDYLATTARADSYPYGIDYPTHRPTGRFSNGLNIPDLISEQIGMESTLPYLSPELTGQRLLVGANFASAGI-----GILNDTGFQFINIIRISKQIEYFQQYQQRVSALIGAEQTER-LVNQALVLI-TLGGNDFVNNYYLVPFSTRSRQFPLPDYVVYLISEYRKILARIYELGARRVLVTGTGPLGC 777
            + +F +LFVT+ +S  P    ++   FGDS+ D GN       + L  TA     PYG  +  H PTGR  +G  I D I+E +G+    PY   +   +    G NFA AG        L   G Q    + +  Q++ F   ++ +  L G+    R ++  AL+L+  +GGND     Y  PF  R     + + V ++I+     +  +  +G +  LV G  P+GC
Sbjct:    9 IFLFSTLFVTIVSSETPCPNFKSIISFGDSIADTGNLVGLSDRNQLPVTAFP---PYGETF-FHHPTGRSCDGRIIMDFIAEFVGLPYVPPYFGSK--NRNFDKGVNFAVAGATALKSSFLKKRGIQPHTNVSLGVQLKSF---KKSLPNLCGSPSDCRDMIGNALILMGEIGGND-----YNFPFFNRKPVKEVEELVPFVIASISSTITELIGMGGKTFLVPGEFPIGC 225          
BLAST of CK937220 vs. ExPASy Swiss-Prot
Match: GDL53_ARATH (GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana GN=At3g26430 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.492e-13
Identity = 74/263 (28.14%), Postives = 113/263 (42.97%), Query Frame = 1
Query:  130 VIFFSLFVTLASVVPQAEARAFFVFGDSLVDNGNNDYLATTARADSYPYGIDYPTHRPTGRFSNGLNIPDLISEQIGMESTLPYLSPELT--GQRLLVGANFASAGIGIL--NDTGFQF--------INIIRISKQIEYFQQYQQRVSALIGAEQTERLVNQALVLITLGGNDFVNNYYLVPFSTRSRQFPLPDYVVYLISEYRKILARIYELGARRVLVTGTGPLGCVPAEL------AQRGVNGECSVELQRAADLFNPQL 864
            V+  S  +   +  P     A F FGDS  D G    L+ +     YP G  +  H P+GRFS+G  I D I+E++G    LPYL+  L   G     GANFA+AG  +   N T  Q         + +++ S  I   Q  + R          +   +QAL    +G ND      L   S + + + +PD    +  +   ++ ++Y  G RR  +  T PLGC+P  L      A +  N  C++     A  +N +L
Sbjct:   11 VLLASCLIHPRACSPSCNFPAIFNFGDSNSDTGG---LSASFGQAPYPNGQTF-FHSPSGRFSDGRLIIDFIAEELG----LPYLNAFLDSIGSNFSHGANFATAGSTVRPPNATIAQSGVSPISLDVQLVQFSDFITRSQLIRNRGGVFKKLLPKKEYFSQALYTFDIGQNDLTAGLKLNMTSDQIKAY-IPD----VHDQLSNVIRKVYSKGGRRFWIHNTAPLGCLPYVLDRFPVPASQIDNHGCAIPRNEIARYYNSEL 260          
The following BLAST results are available for this feature:
BLAST of CK937220 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
GDL50_ARATH1.594e-1829.58GDSL esterase/lipase At3g09930 OS=Arabidopsis thal... [more]
GDL76_ARATH2.719e-1834.54GDSL esterase/lipase At5g14450 OS=Arabidopsis thal... [more]
GDL71_ARATH3.006e-1729.95GDSL esterase/lipase At5g03610 OS=Arabidopsis thal... [more]
GDL21_ARATH3.324e-1627.76GDSL esterase/lipase At1g54030 OS=Arabidopsis thal... [more]
GDL1_CARPA3.675e-1528.02GDSL esterase/lipase OS=Carica papaya PE=1 SV=1[more]
GDL11_ARATH2.382e-1428.80GDSL esterase/lipase At1g28650 OS=Arabidopsis thal... [more]
GDL60_ARATH2.633e-1329.24GDSL esterase/lipase At3g62280 OS=Arabidopsis thal... [more]
LIP4_ARATH3.439e-1327.44GDSL esterase/lipase LIP-4 OS=Arabidopsis thaliana... [more]
GDL9_ARATH4.492e-1329.00GDSL esterase/lipase At1g28600 OS=Arabidopsis thal... [more]
GDL53_ARATH4.492e-1328.14GDSL esterase/lipase At3g26430 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004512_F08 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIIF_F08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937220 ID=CK937220; Name=CK937220; organism=Citrus sinensis; type=EST; length=877bp
GGGGAAACAAGTTGAAGCTAAGTGCACACACAGACANNNNTACACACAGA
AAGTAGTTTCTGTTCTAGGGCTTAGAACCAATCAACAATAATAATGGATC
AATCATCATCCATTTTTGCTTCTTGGTTAGTAATCTTTTTTAGCTTGTTT
GTCACCCTGGCAAGTGTTGTTCCCCAGGCTGAGGCTAGGGCTTTCTTCGT
TTTCGGAGACTCGCTTGTCGACAATGGCAACAATGACTACCTTGCCACCA
CTGCCCGTGCTGATTCATACCCTTATGGCATTGACTATCCAACACACAGA
CCCACTGGCCGTTTCTCTAACGGACTCAACATCCCCGACCTTATCAGTGA
GCAAATTGGCATGGAATCCACGTTGCCATACTTGAGCCCAGAGCTCACCG
GACAAAGGCTACTTGTCGGTGCCAACTTCGCTTCTGCTGGAATTGGAATT
CTCAACGATACTGGGTTTCAATTTATCAACATAATCAGAATCAGCAAGCA
GATCGAGTATTTTCAGCAATATCAACAAAGAGTGAGCGCACTTATTGGAG
CTGAGCAGACTGAAAGATTAGTAAACCAAGCACTTGTCCTAATTACGCTT
GGAGGCAATGACTTTGTTAACAACTACTACTTGGTGCCCTTTTCTACAAG
ATCTCGCCAATTTCCTCTTCCAGATTATGTTGTGTATCTAATCTCAGAGT
ATCGCAAAATTCTGGCGAGGATATATGAACTTGGCGCCCGCAGGGTTTTG
GTGACGGGCACAGGACCACTGGGTTGCGTCCCAGCAGAGCTTGCACAGCG
TGGCGTAAATGGTGAATGTTCAGTAGAACTGCAACGGGCAGCTGATTTGT
TCAACCCACAACTCGTTCAAATGTTAA
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