CK937220

Overview
NameCK937220
Unique NameCK937220
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937220 vs. ExPASy Swiss-Prot
Match: GDL16_ARATH (GDSL esterase/lipase At1g31550 OS=Arabidopsis thaliana GN=At1g31550 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.219e-11
Identity = 67/228 (29.39%), Postives = 98/228 (42.98%), Query Frame = 1
Query:  142 SLFVTLASVVPQAEA-RAFFVFGDSLVDNGN----NDYLATTARADSYPYGIDYPTHRPTGRFSNGLNIPDLISEQIGMESTLPYLSPELTGQRLLVGANFASAGI-----GILNDTGFQFINIIRISKQIEYFQQYQQRVSALIGAEQTERLVNQALVLI-TLGGNDFVNNYYLVPFSTRSRQFPLPDYVVYLISEYRKILARIYELGARRVLVTGTGPLGCVPAEL 792
            +LFV++ S   Q     +   FGDS+ D GN    +D+      A   PYG  +  H PTGRFS+G  I D I+E +G+    PY     T      G NFA A         L + G+   +   +  Q++ F+Q    +  L        ++  AL+L+  +G ND     Y  PF        + + V  +IS     +  +  +G R  LV G  PLGC  A L
Sbjct:   19 TLFVSIVSSESQCRNFESIISFGDSIADTGNLLGLSDHNNLPMSAFP-PYGETF-FHHPTGRFSDGRLIIDFIAEFLGLPYVPPYFGS--TNGNFEKGVNFAVASATALESSFLEEKGYHCPHNFSLGVQLKIFKQSLPNLCGL--PSDCRDMIGNALILMGEIGAND-----YNFPFFQLRPLDEVKELVPLVISTISSAITELIGMGGRTFLVPGGFPLGCSVAFL 235          
BLAST of CK937220 vs. ExPASy Swiss-Prot
Match: GDL2_ARATH (GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana GN=At1g09390 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.204e-11
Identity = 69/237 (29.11%), Postives = 100/237 (42.19%), Query Frame = 1
Query:  196 FVFGDSLVDNGNNDYLATTARADSYPYGIDYPTHRPTGRFSNGLNIPDLISEQIGMESTLPYLSPELTGQRLLVGANFASAGIGILNDTGFQFINIIRISKQIEYFQQYQQRVSAL--IGAEQTERLVNQ-----ALVLITLGGNDFVNNYYLVPFSTRSRQFPLPDYVVYLISEYRKILARIYELGARRVLVTGTGPLGCVPAELAQRGVNG----ECSVELQRAADLFNPQLVQM 873
            F FGDS  D G    +A    +   P G  +   R TGR S+G  + D + + +      PYL   L G +   GANFA  G   L       +NI     Q+  F  ++ R   L  I     E ++ +     AL +I +G ND  ++     FS       +   +  +ISE +  +  +Y+ G R+  V  TGPLGC+P +L+     G     C      AA LFN  L  M
Sbjct:   39 FNFGDSNSDTGG--LVAGLGYSIGLPNGRSF-FQRSTGRLSDGRLVIDFLCQSLNTSLLNPYLD-SLVGSKFQNGANFAIVGSSTLPRYVPFALNI-----QLMQFLHFKSRALELASISDPLKEMMIGESGFRNALYMIDIGQNDIADS-----FSKGLSYSRVVKLIPNVISEIKSAIKILYDEGGRKFWVHNTGPLGCLPQKLSMVHSKGFDKHGCLATYNAAAKLFNEGLDHM 261          
BLAST of CK937220 vs. ExPASy Swiss-Prot
Match: GDL40_ARATH (GDSL esterase/lipase At2g27360 OS=Arabidopsis thaliana GN=At2g27360 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.491e-11
Identity = 63/234 (26.92%), Postives = 101/234 (43.16%), Query Frame = 1
Query:  127 LVIFFSLFVTLASVVPQAEARAF---FVFGDSLVDNGNNDYLATT---ARADSYPYGIDYPTHRPTGRFSNGLNIPDLISEQIGMESTLPYLSPELTGQRLLVGANFASAGI-----GILNDTGFQFINI-IRISKQIEYFQQYQQRVSALIGAEQTERLVNQALVLITLGGNDFVNNYYLVPFSTRSRQFPLPDYVVYLISEYRKILARIYELGARRVLVTGTGPLGCVPAEL 792
            L+ FF     +  V  Q   R F     FGDS+ D GN   L++      +   PYG  +  H P+GRFS+G  I D I+E +G+    P+   +        G NFA  G       +L + G       I +  Q++ F++    +      +  + + N  +++  +GGND     Y  P   R     + + V  +I+     ++ + ++GAR  LV G  PLGC  A L
Sbjct:    9 LLSFFISTFLITVVTSQTRCRNFKSIISFGDSITDTGNLLGLSSPNDLPESAFPPYGETF-FHHPSGRFSDGRLIIDFIAEFLGIPHVPPFYGSK--NGNFEKGVNFAVGGATALECSVLEEKGTHCSQSNISLGNQLKSFKESLPYLCGSSSPDCRDMIENAFILIGEIGGND-----YNFPLFDRKNIEEVKELVPLVITTISSAISELVDMGARTFLVPGNFPLGCSVAYL 234          
BLAST of CK937220 vs. ExPASy Swiss-Prot
Match: GDL45_ARATH (GDSL esterase/lipase At2g36325 OS=Arabidopsis thaliana GN=At2g36325 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.171e-11
Identity = 63/205 (30.73%), Postives = 99/205 (48.29%), Query Frame = 1
Query:  196 FVFGDSLVDNGNNDYLATTARADSYPYGIDYPTHRPTGRFSNGLNIPDLISEQIGMESTLPYLSPELTGQRLLV--GANFASAGIGILNDTGFQFINIIRISKQIEYFQQYQQRVSALIGAEQTERLVNQALVLITLGGNDFVNNYYLVPFSTRSRQFPLPDYVVYLISEYRKILARIYELGARRVLVTGTGPLGCVPAELAQRG 804
            FVFGDS  D GN  +L   +    +P GI +P   PTGRFS+G    D +++ IG+ + + Y   +    RL V  G NFA  G G   +T F+ +     S QI+ F+Q   R +    A+     +N ++   ++ GND++  Y     S   R       V  ++ + +    RI +LG R+VLV  + P  C+P  +  +G
Sbjct:   49 FVFGDSYADTGNTPFLIVPSWR--FPNGITFPGI-PTGRFSDGRVSTDYLAKYIGVRTPITYKWGKYGRPRLAVKRGMNFAYGGAGAF-ETMFKLVP--TASVQIDSFEQLLMR-NVYSPAD-----LNSSVAFFSIIGNDYL-TYDRRNGSEEGRSALTRKVVKQILLDVK----RIKDLGVRKVLVALSPPQKCLPKLVTPKG 236          
BLAST of CK937220 vs. ExPASy Swiss-Prot
Match: GDL20_ARATH (GDSL esterase/lipase At1g54020 OS=Arabidopsis thaliana GN=At1g54020 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.171e-11
Identity = 65/262 (24.81%), Postives = 118/262 (45.04%), Query Frame = 1
Query:  100 QSSSIFASWLVIFFSLFVTLASVVPQ-AEARAFFVFGDSLVDNGNNDYLATTARADSY-PYGIDYPTHRPTGRFSNGLNIPDLISEQIGMESTLPYLSPELT-GQRLLVGANFASAGIGILNDTGFQFINIIRISKQIEYFQQYQQRVSALIGAEQTERLVNQALVLITLGGNDFVNNYYLVPFSTRSRQFPLPDYVVYLISEYRKILARIYELGARRVLVTGTGPLGCVPAELAQRGVNGECSVELQRAADLFNPQLVQML 876
            + SS+    +++ F L   L ++  Q   A   F FGDS  D GN  +L +     ++ PYG       P G+FS+G  +PD I++ +G+   LP   P L  G  +  GA+FA     IL        + + +++Q+  F Q       +I   + +  + +++ +I++G  D+ N     P +  S Q     +V  + + ++  +  +Y  GA + +V    PLGC+P    +      C  +L   A   N ++  +L
Sbjct:    2 ECSSVSVLGILLVFPLLHNLVTISGQNLPAVGLFTFGDSNFDAGNKKFLTSAPLPQNFWPYGKSRDD--PKGKFSDGKIVPDFIAKFMGIPHDLP---PALKPGTDVSRGASFAVGSASILGSPK----DSLALNQQVRKFNQ-------MISNWKVD-YIQKSVFMISIGMEDYYNFTKNNPNAEVSAQ---QAFVTSVTNRFKSDINLLYSSGASKFVVHLLAPLGCLPIARQEFKTGNNCYEKLNDLAKQHNAKIGPIL 243          
The following BLAST results are available for this feature:
BLAST of CK937220 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
GDL16_ARATH3.219e-1129.39GDSL esterase/lipase At1g31550 OS=Arabidopsis thal... [more]
GDL2_ARATH4.204e-1129.11GDSL esterase/lipase At1g09390 OS=Arabidopsis thal... [more]
GDL40_ARATH5.491e-1126.92GDSL esterase/lipase At2g27360 OS=Arabidopsis thal... [more]
GDL45_ARATH7.171e-1130.73GDSL esterase/lipase At2g36325 OS=Arabidopsis thal... [more]
GDL20_ARATH7.171e-1124.81GDSL esterase/lipase At1g54020 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004512_F08 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIIF_F08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937220 ID=CK937220; Name=CK937220; organism=Citrus sinensis; type=EST; length=877bp
GGGGAAACAAGTTGAAGCTAAGTGCACACACAGACANNNNTACACACAGA
AAGTAGTTTCTGTTCTAGGGCTTAGAACCAATCAACAATAATAATGGATC
AATCATCATCCATTTTTGCTTCTTGGTTAGTAATCTTTTTTAGCTTGTTT
GTCACCCTGGCAAGTGTTGTTCCCCAGGCTGAGGCTAGGGCTTTCTTCGT
TTTCGGAGACTCGCTTGTCGACAATGGCAACAATGACTACCTTGCCACCA
CTGCCCGTGCTGATTCATACCCTTATGGCATTGACTATCCAACACACAGA
CCCACTGGCCGTTTCTCTAACGGACTCAACATCCCCGACCTTATCAGTGA
GCAAATTGGCATGGAATCCACGTTGCCATACTTGAGCCCAGAGCTCACCG
GACAAAGGCTACTTGTCGGTGCCAACTTCGCTTCTGCTGGAATTGGAATT
CTCAACGATACTGGGTTTCAATTTATCAACATAATCAGAATCAGCAAGCA
GATCGAGTATTTTCAGCAATATCAACAAAGAGTGAGCGCACTTATTGGAG
CTGAGCAGACTGAAAGATTAGTAAACCAAGCACTTGTCCTAATTACGCTT
GGAGGCAATGACTTTGTTAACAACTACTACTTGGTGCCCTTTTCTACAAG
ATCTCGCCAATTTCCTCTTCCAGATTATGTTGTGTATCTAATCTCAGAGT
ATCGCAAAATTCTGGCGAGGATATATGAACTTGGCGCCCGCAGGGTTTTG
GTGACGGGCACAGGACCACTGGGTTGCGTCCCAGCAGAGCTTGCACAGCG
TGGCGTAAATGGTGAATGTTCAGTAGAACTGCAACGGGCAGCTGATTTGT
TCAACCCACAACTCGTTCAAATGTTAA
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