CN187104

Overview
NameCN187104
Unique NameCN187104
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187104 vs. ExPASy Swiss-Prot
Match: MARK3_RAT (MAP/microtubule affinity-regulating kinase 3 OS=Rattus norvegicus GN=Mark3 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.194e-52
Identity = 92/228 (40.35%), Postives = 151/228 (66.23%), Query Frame = 1
Query:   34 REISTMKLIRHPNVIRMYEVMASKTKIYIVLEFVTGGELFDKIASRGRLKEDEARKYFQQLINAVDYCHSRGVCHRDLKPENLLLDANGVLKVSDFGLSALPQQVRDDGLLHTTCGTPNYVAPEVINNKGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPS---FEQPNIDL 708
            RE+  MK++ HPN+++++EV+ ++  +Y+++E+ +GGE+FD + + GR+KE EAR  F+Q+++AV YCH + + HRDLK ENLLLDA+  +K++DFG S    +      L T CG+P Y APE+   K YDG + D+WS GVILY L++G LPF+  NL  L +++ +  ++ P + ST  + L+ R L  NPV R T+ +++++ W   G++      F +P +D+
Sbjct:  102 REVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKITDFGFS---NEFTVGSKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPVKRGTLEQIMKDRWINAGHEEEELKPFVEPELDI 326          
BLAST of CN187104 vs. ExPASy Swiss-Prot
Match: MARK3_MOUSE (MAP/microtubule affinity-regulating kinase 3 OS=Mus musculus GN=Mark3 PE=1 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.194e-52
Identity = 92/228 (40.35%), Postives = 151/228 (66.23%), Query Frame = 1
Query:   34 REISTMKLIRHPNVIRMYEVMASKTKIYIVLEFVTGGELFDKIASRGRLKEDEARKYFQQLINAVDYCHSRGVCHRDLKPENLLLDANGVLKVSDFGLSALPQQVRDDGLLHTTCGTPNYVAPEVINNKGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPS---FEQPNIDL 708
            RE+  MK++ HPN+++++EV+ ++  +Y+++E+ +GGE+FD + + GR+KE EAR  F+Q+++AV YCH + + HRDLK ENLLLDA+  +K++DFG S    +      L T CG+P Y APE+   K YDG + D+WS GVILY L++G LPF+  NL  L +++ +  ++ P + ST  + L+ R L  NPV R T+ +++++ W   G++      F +P +D+
Sbjct:  102 REVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS---NEFTVGSKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPVKRGTLEQIMKDRWINAGHEEDELKPFVEPELDI 326          
BLAST of CN187104 vs. ExPASy Swiss-Prot
Match: AAPK1_CAEEL (5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Caenorhabditis elegans GN=aak-1 PE=2 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 3.474e-52
Identity = 95/215 (44.19%), Postives = 142/215 (66.05%), Query Frame = 1
Query:   19 IGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEFVTGGELFDKIASRGRLKEDEARKYFQQLINAVDYCHSRGVCHRDLKPENLLLDANGVLKVSDFGLSALPQQVRDDGLLHTTCGTPNYVAPEVINNKGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFK 663
            + + + EI  ++ + HP++ R++ V+++ + I++V+E V+GGELF  I  +G L   E+R+YFQQ+I+ V YCH+  + HRDLKPENLLLDAN  +K++DFGLS     + D  LL T CG+PNY APE+I+NK Y G + DLWSCGVILY ++ G LPF++ N+  L+ KI    +  P      A  LIS +L  +PV R  +  ++ + WF+
Sbjct:   66 VNKTRNEIDNLQKLTHPHITRLFRVISTPSDIFLVMELVSGGELFSYITRKGALPIRESRRYFQQIISGVSYCHNHMIVHRDLKPENLLLDANKNIKIADFGLS---NYMTDGDLLSTACGSPNYAAPELISNKLYVGPEVDLWSCGVILYAMLCGTLPFDDQNVPTLFAKIKSGRYTVPYSMEKQAADLISTMLQVDPVKRADVKRIVNHSWFR 277          
BLAST of CN187104 vs. ExPASy Swiss-Prot
Match: MARK1_RAT (Serine/threonine-protein kinase MARK1 OS=Rattus norvegicus GN=Mark1 PE=1 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 5.926e-52
Identity = 90/228 (39.47%), Postives = 152/228 (66.67%), Query Frame = 1
Query:   34 REISTMKLIRHPNVIRMYEVMASKTKIYIVLEFVTGGELFDKIASRGRLKEDEARKYFQQLINAVDYCHSRGVCHRDLKPENLLLDANGVLKVSDFGLSALPQQVRDDGLLHTTCGTPNYVAPEVINNKGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPS---FEQPNIDL 708
            RE+  MK++ HPN+++++EV+ ++  +Y+V+E+ +GGE+FD + + GR+KE EAR  F+Q+++AV YCH + + HRDLK ENLLLDA+  +K++DFG S    +      L T CG+P Y APE+   K YDG + D+WS GVILY L++G LPF+  NL  L +++ +  ++ P + ST  + L+ ++L  NP+ R ++ +++++ W   G++      + +P +DL
Sbjct:  106 REVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKCIVHRDLKAENLLLDADMNIKIADFGFS---NEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRVPFYMSTDCENLLKKLLVLNPIKRGSLEQIMKDRWMNVGHEEEELKPYSEPELDL 330          
BLAST of CN187104 vs. ExPASy Swiss-Prot
Match: MARK1_MOUSE (Serine/threonine-protein kinase MARK1 OS=Mus musculus GN=Mark1 PE=1 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 5.926e-52
Identity = 90/228 (39.47%), Postives = 152/228 (66.67%), Query Frame = 1
Query:   34 REISTMKLIRHPNVIRMYEVMASKTKIYIVLEFVTGGELFDKIASRGRLKEDEARKYFQQLINAVDYCHSRGVCHRDLKPENLLLDANGVLKVSDFGLSALPQQVRDDGLLHTTCGTPNYVAPEVINNKGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYKPPS---FEQPNIDL 708
            RE+  MK++ HPN+++++EV+ ++  +Y+V+E+ +GGE+FD + + GR+KE EAR  F+Q+++AV YCH + + HRDLK ENLLLDA+  +K++DFG S    +      L T CG+P Y APE+   K YDG + D+WS GVILY L++G LPF+  NL  L +++ +  ++ P + ST  + L+ ++L  NP+ R ++ +++++ W   G++      + +P +DL
Sbjct:  106 REVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKCIVHRDLKAENLLLDADMNIKIADFGFS---NEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRVPFYMSTDCENLLKKLLVLNPIKRGSLEQIMKDRWMNVGHEEEELKPYSEPELDL 330          
BLAST of CN187104 vs. ExPASy Swiss-Prot
Match: RKIN1_SECCE (Carbon catabolite-derepressing protein kinase OS=Secale cereale GN=RKIN1 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.011e-51
Identity = 102/220 (46.36%), Postives = 151/220 (68.64%), Query Frame = 1
Query:   13 KMIGQIKREISTMKL---IRHPNVIRMYEVMASKTKIYIVLEFVTGGELFDKIASRGRLKEDEARKYFQQLINAVDYCHSRGVCHRDLKPENLLLDANGVLKVSDFGLSALPQQVRDDGLLHTTCGTPNYVAPEVINNKGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFK 663
            +M  + KREI  ++L   + HP++IR+YEV+ +   I++V+E+   G+L D I  + RL+EDEAR+ FQQ+I+AV+YCH   V HRDLKPENLLLD+   +K++DFGLS +   + D   L T+CG+ NY APEVI+ K Y G + D+WSCGVILY L+ G +PF++ N+  L+KKI    +  P + S   + LISR+L  +P+ RIT+ E+ ++ WF+
Sbjct:   54 EMEEKAKREIKILRLFIDLIHPHIIRVYEVIVTPKDIFVVMEYCQNGDLLDYILEKRRLQEDEARRTFQQIISAVEYCHRNKVVHRDLKPENLLLDSKYNVKLADFGLSNV---MHDGHFLKTSCGSLNYAAPEVISGKLYAGPEIDVWSCGVILYALLCGAVPFDDDNIPNLFKKIKGGTYILPIYLSDLVRDLISRMLIVDPMKRITIGEIRKHSWFQ 270          
BLAST of CN187104 vs. ExPASy Swiss-Prot
Match: MARK4_MOUSE (MAP/microtubule affinity-regulating kinase 4 OS=Mus musculus GN=Mark4 PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.941e-51
Identity = 90/224 (40.18%), Postives = 146/224 (65.18%), Query Frame = 1
Query:    4 LKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEFVTGGELFDKIASRGRLKEDEARKYFQQLINAVDYCHSRGVCHRDLKPENLLLDANGVLKVSDFGLSALPQQVRDDGLLHTTCGTPNYVAPEVINNKGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYK 675
            L    + ++ RE+  MK + HPN+++++EV+ ++  +Y+V+E+ + GE+FD + S GR+KE EAR  F+Q+++AV YCH + + HRDLK ENLLLDA   +K++DFG S    +      L T CG+P Y APE+   K YDG + D+WS GVILY L++G LPF+  NL  L +++ +  ++ P + ST  + ++ R L  NP  R T+ ++++++W   GY+
Sbjct:   95 LNPSSLQKLFREVRIMKGLNHPNIVKLFEVIETEKTLYLVMEYASAGEVFDYLVSHGRMKEKEARAKFRQIVSAVHYCHQKNIVHRDLKAENLLLDAEANIKIADFGFS---NEFTLGSKLDTFCGSPPYAAPELFQGKKYDGPEVDIWSLGVILYTLVSGSLPFDGHNLKELRERVLRGKYRVPFYMSTDCESILRRFLVLNPAKRCTLEQIMKDKWINIGYE 315          
BLAST of CN187104 vs. ExPASy Swiss-Prot
Match: MARK4_HUMAN (MAP/microtubule affinity-regulating kinase 4 OS=Homo sapiens GN=MARK4 PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.941e-51
Identity = 90/224 (40.18%), Postives = 146/224 (65.18%), Query Frame = 1
Query:    4 LKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEFVTGGELFDKIASRGRLKEDEARKYFQQLINAVDYCHSRGVCHRDLKPENLLLDANGVLKVSDFGLSALPQQVRDDGLLHTTCGTPNYVAPEVINNKGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFKKGYK 675
            L    + ++ RE+  MK + HPN+++++EV+ ++  +Y+V+E+ + GE+FD + S GR+KE EAR  F+Q+++AV YCH + + HRDLK ENLLLDA   +K++DFG S    +      L T CG+P Y APE+   K YDG + D+WS GVILY L++G LPF+  NL  L +++ +  ++ P + ST  + ++ R L  NP  R T+ ++++++W   GY+
Sbjct:   95 LNPSSLQKLFREVRIMKGLNHPNIVKLFEVIETEKTLYLVMEYASAGEVFDYLVSHGRMKEKEARAKFRQIVSAVHYCHQKNIVHRDLKAENLLLDAEANIKIADFGFS---NEFTLGSKLDTFCGSPPYAAPELFQGKKYDGPEVDIWSLGVILYTLVSGSLPFDGHNLKELRERVLRGKYRVPFYMSTDCESILRRFLVLNPAKRCTLEQIMKDKWINIGYE 315          
BLAST of CN187104 vs. ExPASy Swiss-Prot
Match: SIK2_CHICK (Serine/threonine-protein kinase SIK2 OS=Gallus gallus GN=SIK2 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.841e-51
Identity = 96/213 (45.07%), Postives = 140/213 (65.73%), Query Frame = 1
Query:   25 QIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEFVTGGELFDKIASRGRLKEDEARKYFQQLINAVDYCHSRGVCHRDLKPENLLLDANGVLKVSDFGLSALPQQVRDDGLLHTTCGTPNYVAPEVINNKGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFK 663
            +I RE+  MKL+ HP++I++Y+VM +K  +YIV EF   GE+FD + S G L E EARK F Q+++AV+YCHS  + HRDLK ENLLLDAN  +K++DFG        +    L T CG+P Y APEV   K Y+G   D+WS GV+LYVL+ G LPF+  NL  L +++ +  F+ P + S   + LI R+L  +P  RIT++++ +++W +
Sbjct:   69 KIYREVQIMKLLNHPHIIKLYQVMETKDMLYIVTEFAKNGEMFDHLTSNGHLSESEARKKFWQILSAVEYCHSHHIVHRDLKTENLLLDANMNIKLADFGFGNF---YKSGEPLSTWCGSPPYAAPEVFEGKEYEGPHLDIWSLGVVLYVLVCGSLPFDGPNLPTLRQRVLEGRFRIPYFMSEDCETLIRRMLVVDPTKRITISQIKQHKWMQ 278          
BLAST of CN187104 vs. ExPASy Swiss-Prot
Match: SIK1_RAT (Serine/threonine-protein kinase SIK1 OS=Rattus norvegicus GN=Sik1 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.841e-51
Identity = 96/213 (45.07%), Postives = 140/213 (65.73%), Query Frame = 1
Query:   25 QIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEFVTGGELFDKIASRGRLKEDEARKYFQQLINAVDYCHSRGVCHRDLKPENLLLDANGVLKVSDFGLSALPQQVRDDGLLHTTCGTPNYVAPEVINNKGYDGAKADLWSCGVILYVLMAGYLPFEESNLMALYKKIFKADFKSPPWFSTSAKKLISRILDPNPVTRITMAEVIENEWFK 663
            +I RE+  MKL+ HPN+I++Y+VM +K  +YIV EF   GE+FD + S G L E+EARK F Q+++AV+YCH+  + HRDLK ENLLLD N  +K++DFG        +    L T CG+P Y APEV   K Y+G + D+WS GV+LYVL+ G LPF+  NL  L +++ +  F+ P + S   + LI R+L  +P  RIT+A++ ++ W +
Sbjct:   70 KIYREVQLMKLLNHPNIIKLYQVMETKDMLYIVTEFAKNGEMFDYLTSNGHLSENEARKKFWQILSAVEYCHNHHIVHRDLKTENLLLDGNMDIKLADFGFGNF---YKPGEPLSTWCGSPPYAAPEVFEGKEYEGPQLDIWSLGVVLYVLVCGSLPFDGPNLPTLRQRVLEGRFRIPFFMSQDCETLIRRMLVVDPAKRITIAQIRQHRWMQ 279          
The following BLAST results are available for this feature:
BLAST of CN187104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MARK3_RAT1.194e-5240.35MAP/microtubule affinity-regulating kinase 3 OS=Ra... [more]
MARK3_MOUSE1.194e-5240.35MAP/microtubule affinity-regulating kinase 3 OS=Mu... [more]
AAPK1_CAEEL3.474e-5244.195'-AMP-activated protein kinase catalytic subunit ... [more]
MARK1_RAT5.926e-5239.47Serine/threonine-protein kinase MARK1 OS=Rattus no... [more]
MARK1_MOUSE5.926e-5239.47Serine/threonine-protein kinase MARK1 OS=Mus muscu... [more]
RKIN1_SECCE1.011e-5146.36Carbon catabolite-derepressing protein kinase OS=S... [more]
MARK4_MOUSE2.941e-5140.18MAP/microtubule affinity-regulating kinase 4 OS=Mu... [more]
MARK4_HUMAN2.941e-5140.18MAP/microtubule affinity-regulating kinase 4 OS=Ho... [more]
SIK2_CHICK3.841e-5145.07Serine/threonine-protein kinase SIK2 OS=Gallus gal... [more]
SIK1_RAT3.841e-5145.07Serine/threonine-protein kinase SIK1 OS=Rattus nor... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003P05_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003P05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187104 ID=CN187104; Name=CN187104; organism=Citrus sinensis; type=EST; length=709bp
ATGCTCAAGCATAAGATGATCGGTCAGATTAAGCGTGAAATTTCAACCAT
GAAACTTATTAGACACCCTAATGTCATCCGCATGTATGAGGTGATGGCAA
GCAAGACAAAAATATACATTGTTTTGGAATTTGTGACTGGTGGTGAACTT
TTTGACAAAATTGCAAGTAGAGGGAGGTTGAAGGAAGATGAAGCTAGAAA
GTATTTTCAGCAGCTTATTAATGCCGTGGATTATTGCCATAGCAGAGGTG
TTTGTCATAGAGATCTAAAGCCAGAGAACTTACTGTTGGATGCTAATGGA
GTTCTTAAGGTTTCAGATTTTGGATTGAGTGCTTTACCTCAGCAAGTTAG
AGATGATGGTTTACTTCATACAACATGCGGAACACCTAATTATGTTGCTC
CAGAGGTGATTAATAATAAAGGCTACGATGGAGCTAAGGCAGATCTCTGG
TCTTGCGGTGTGATTCTTTATGTCTTAATGGCTGGTTACTTGCCTTTTGA
AGAATCCAATCTGATGGCTTTATATAAGAAGATATTTAAGGCTGACTTCA
AGAGTCCTCCATGGTTCTCGACAAGTGCAAAGAAACTGATCTCAAGAATT
TTGGACCCTAATCCTGTGACACGAATAACGATGGCTGAAGTTATTGAGAA
TGAGTGGTTTAAGAAAGGATATAAGCCACCTAGTTTTGAACAACCTAATA
TTGATCTTG
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