CN187100

Overview
NameCN187100
Unique NameCN187100
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length771
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187100 vs. ExPASy Swiss-Prot
Match: PPM1K_BOVIN (Protein phosphatase 1K, mitochondrial OS=Bos taurus GN=PPM1K PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.515e-22
Identity = 61/161 (37.89%), Postives = 99/161 (61.49%), Query Frame = -1
Query:  286 AGSTASTAVLL-GDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIQEAGGFVIW--AGTWRVGGVLAVSRAFGDRLLK-QYVVAEPEIQEEEIDGVD--FIIIASDGLWNVISNRDAVAMVEHITDAEAASRKLIKEAYARGSSDNITCVVVRF 750
            +G+TA+ A+L  G  L++A+VGDSR +  R G  + L+IDH P+R DE++RI++ GGFV W   G   V G LA++R+ GD  LK   V+AEPE +  ++   D  F+++ +DG+  ++++++    V    D   A+  + ++A   G+ DN T VVV F
Sbjct:  186 SGTTATVALLRDGIELVIASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSLGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQYGTEDNTTAVVVPF 346          
BLAST of CN187100 vs. ExPASy Swiss-Prot
Match: PPM1K_XENLA (Protein phosphatase 1K, mitochondrial OS=Xenopus laevis GN=ppm1k PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.289e-22
Identity = 60/160 (37.50%), Postives = 100/160 (62.50%), Query Frame = -1
Query:  286 GSTASTAVLL-GDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIQEAGGFVIW--AGTWRVGGVLAVSRAFGDRLLKQY-VVAEPEIQEEEIDGVD--FIIIASDGLWNVISNRDAVAMVEHITDAEAASRKLIKEAYARGSSDNITCVVVRF 747
            G+TA+ A+L  G  L+VA+VGDSR +  R G    L+IDH P+R +E+ RI+++GGFV W   G   V G LA++R+ GD  LK   V+AEPE +  ++   D  F+++ +DG+  ++++++   ++    D + A++ L ++A   G+ DN T +VV F
Sbjct:  188 GTTATVALLRDGIELVVASVGDSRALLCRRGKPFKLTIDHTPERKEEKLRIKKSGGFVTWNSLGQPNVNGRLAMTRSIGDLDLKSMGVIAEPETKRVKLQHTDDGFLVLTTDGINFIVNSQEICDIINQCHDPKEAAQVLTEQAIQYGTEDNSTAIVVPF 347          
BLAST of CN187100 vs. ExPASy Swiss-Prot
Match: P2C22_ARATH (Probable protein phosphatase 2C 22 OS=Arabidopsis thaliana GN=At2g25620 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.316e-22
Identity = 70/180 (38.89%), Postives = 101/180 (56.11%), Query Frame = -1
Query:  262 AGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIQEAGGFVIWAGTWRVGGVLAVSRAFGDRLLKQY-----------VVAEPEIQEEEIDGVD-FIIIASDGLWNVISNRDAV-----AMVEHITDAEAASRKLIKEAYARGSSDNITCVVVRFENS*PDPL 750
            +G+TA  A+L G  L+VAN GD R V SR G AI +S DHKP  S ER+RI+ +GG V       + G L V+RA GD  ++             ++AEPE+   ++   D F+II  DG+W+V  +++AV      + EH  D    S++L++EA  R S+DN+T VVV  +   P  L
Sbjct:  189 SGTTALAAILFGRSLVVANAGDCRAVLSRQGKAIEMSRDHKPMSSKERRRIEASGGHVF---DGYLNGQLNVARALGDFHMEGMKKKKDGSDCGPLIAEPELMTTKLTEEDEFLIIGCDGVWDVFMSQNAVDFARRRLQEH-NDPVMCSKELVEEALKRKSADNVTAVVVCLQPQPPPNL 364          
BLAST of CN187100 vs. ExPASy Swiss-Prot
Match: P2C11_ORYSJ (Probable protein phosphatase 2C 11 OS=Oryza sativa subsp. japonica GN=Os02g0180000 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.555e-22
Identity = 71/187 (37.97%), Postives = 99/187 (52.94%), Query Frame = -1
Query:  283 EKGQHKD-----AGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIQEAGGFVIWAGTWRVGGVLAVSRAFGDRLL---------KQYVVAEPEIQEEEI-DGVDFIIIASDGLWNVISNRDAVAMV-EHITDAEAAS--------RKLIKEAYARGSSDNITCVVVRFE 771
            E+G H D      G TA  A++  ++L+VAN GDSR V SRAG A  LS DHKP+   ER RI +AGGF+      R+ G L ++RA GD            KQ V A P+I   E+ D  DF+++A DG+W+ +S++  V  + EHI    + S        R L          DN+T V+V+F+
Sbjct:  147 EEGPHSDFAGPTCGCTACVALIRNNQLVVANAGDSRCVISRAGQAYNLSRDHKPELEAERDRIVKAGGFIHMG---RINGSLNLTRAIGDMEFKQNKFLPPEKQIVTANPDINVVELCDDDDFLVLACDGIWDCMSSQQLVDFIHEHIQKESSLSAVCERVLDRCLAPSTIGGEGCDNMTMVLVQFK 330          
BLAST of CN187100 vs. ExPASy Swiss-Prot
Match: P2C02_ORYSJ (Probable protein phosphatase 2C 2 OS=Oryza sativa subsp. japonica GN=Os01g0295700 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.555e-22
Identity = 63/168 (37.50%), Postives = 98/168 (58.33%), Query Frame = -1
Query:  286 KDAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIQEAGGFVIWAGTWRVGGVLAVSRAFGDRLLK------QYVVAEPEIQEEEI-DGVDFIIIASDGLWNVISNRDAVAMV----EHITDAEAASRKLIKEAYARGSSDNITCVVVRF 756
            + +G+TA  A++ G +LLVAN GD R V  R G A+ +S DH+P    E +RI E GG++       + GVL+V+RA GD  +K        ++AEPE Q+  + +  +F+II  DG+W+V+S++ AV +V        D E  +R+L  EA    + DN+T +V+ F
Sbjct:  175 RSSGTTALAALIFGRQLLVANAGDCRAVLCRKGVAVEMSRDHRPTYDAEHERITECGGYI---EDGYLNGVLSVTRALGDWDMKMPQGSRSPLIAEPEFQQTTLTEDDEFLIIGCDGIWDVMSSQHAVTIVRKGLRRHDDPERCARELAMEAKRLQTFDNLTVIVICF 339          
BLAST of CN187100 vs. ExPASy Swiss-Prot
Match: P2C58_ORYSJ (Probable protein phosphatase 2C 58 OS=Oryza sativa subsp. japonica GN=Os06g0651600 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.248e-21
Identity = 70/187 (37.43%), Postives = 101/187 (54.01%), Query Frame = -1
Query:  283 EKGQHKD-----AGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIQEAGGFVIWAGTWRVGGVLAVSRAFGD------RLL---KQYVVAEPEIQEEEI-DGVDFIIIASDGLWNVISNRDAVAMV-EHITDAEAAS--------RKLIKEAYARGSSDNITCVVVRFE 771
            E+G H D      GSTA  A++   +L+VAN GDSR V SR G A  LS DHKP+   ER+RI +AGG++      RV G + +SRA GD      + L   KQ + A P+I   E+ D  DF+++A DG+W+ +S++  V  + EHI    + S        R L          DN+T ++V+F+
Sbjct:  147 EEGPHSDFAGPTCGSTACVAIVRNSQLVVANAGDSRCVISRNGQAYNLSRDHKPELEAERERILKAGGYIQMG---RVNGTINLSRAIGDIEFKQNKFLSPDKQMLTANPDINTVELCDDDDFLVLACDGIWDCMSSQQLVDFIHEHINTESSLSAVCERVLDRCLAPSTLGGEGCDNMTMILVQFK 330          
BLAST of CN187100 vs. ExPASy Swiss-Prot
Match: P2C43_ARATH (Probable protein phosphatase 2C 43 OS=Arabidopsis thaliana GN=At3g17250 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.630e-21
Identity = 68/189 (35.98%), Postives = 108/189 (57.14%), Query Frame = -1
Query:  223 GSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIQEAGGFVIWAGTWRVGGVLAVSRAFGDRLLKQY---------VVAEPEIQEEEIDGVD-FIIIASDGLWNVISNRDAVAMV----EHITDAEAASRKLIKEAYARGSSDNITCVVVRFENS*PDPLTFSCGFYIGFERR 747
            G+TA TA+++G  L+VANVGD R V  R G A+ +S DHK     ER+R+++ GG+  + G +  G  LAV+RA GD  +K++         ++++P+IQ+  +   D F+I+  DG+W+V++++ AV  V        D    + +L +EA    SSDN+T VV+ F +S P P      F +  E R
Sbjct:  229 GTTALTALVIGRHLMVANVGDCRAVLCRKGKAVDMSFDHKSTFEPERRRVEDLGGY--FEGEYLYGD-LAVTRALGDWSIKRFSPLGESLSPLISDPDIQQMILTEEDEFLIMGCDGVWDVMTSQYAVTFVRQGLRRHGDPRRCAMELGREALRLDSSDNVTVVVICFSSS-PAPQRRRIRFCVSDEAR 413          
BLAST of CN187100 vs. ExPASy Swiss-Prot
Match: P2C42_ORYSJ (Probable protein phosphatase 2C 42 OS=Oryza sativa subsp. japonica GN=Os04g0500900 PE=2 SV=4)

HSP 1 Score: 102.834 bits (255), Expect = 2.129e-21
Identity = 66/171 (38.60%), Postives = 101/171 (59.06%), Query Frame = -1
Query:  286 GSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIQEAGGFVIWA-GTWRVGGVLAVSRAFGD---------RLLKQYVVAEPEIQEEEI-DGVDFIIIASDGLWNVISNRDAVAMVE-HITDAEAAS---RKLIKEAYARG--SSDNITCVVVRF 747
            G TA   ++   +++V N GD+R V SR G AI LS DHKP+  +E QRI  AGG V ++ G+ RV   +AVSRA GD         R  +Q +   PEI+ +++ D  +F++IA DG+W+V++N+  V  V  H+ +    S     L++EA  R   S+DN++ ++VRF
Sbjct:  151 GCTACVVLIRNTQIVVGNAGDARCVISRNGQAIALSNDHKPNFPEETQRIVAAGGSVSFSRGSHRVNNGIAVSRAIGDLSYKNNKKLRPEQQLLTCSPEIRADQLTDDTEFLVIACDGVWDVLANQAVVDFVRLHLNNGVELSVICESLLQEAITRDPPSTDNMSVILVRF 321          
BLAST of CN187100 vs. ExPASy Swiss-Prot
Match: PP2C_LEICH (Protein phosphatase 2C OS=Leishmania chagasi PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.780e-21
Identity = 70/178 (39.33%), Postives = 100/178 (56.18%), Query Frame = -1
Query:  280 KDAGSTASTAVLLGD----RLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIQEAGGFVIWAGTWRVGGVLAVSRAFGDR--------LLKQYVVAEPEIQEEE--IDGVDFIIIASDGLW-NVISNRDAVAMV----EHITDAEAASRKLIKEAYARGSSDNITCVVVRFEN 756
            ++ GST +  V L +     L V NVGDSRVVA   G  +PL+ DHKP+   ERQRI+   G V      RV G LAVSRAFGDR         L+Q V+A  ++Q ++   D  DF+++  DG++     N + VA V    E   D    + ++ +EA  RGS DNI+C++V+F++
Sbjct:  102 REGGSTGTFFVALKEGNKVHLQVGNVGDSRVVACIDGVCVPLTEDHKPNNEGERQRIENCAGRV---ENNRVDGSLAVSRAFGDREYKLGSGSQLEQKVIALADVQHKDFTFDSNDFVLLCCDGVFEGNFPNEEVVAYVKQQLETCNDLAEVAGRVCEEAIERGSRDNISCMIVQFKD 276          
BLAST of CN187100 vs. ExPASy Swiss-Prot
Match: PPM1K_MOUSE (Protein phosphatase 1K, mitochondrial OS=Mus musculus GN=Ppm1k PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.742e-21
Identity = 61/161 (37.89%), Postives = 98/161 (60.87%), Query Frame = -1
Query:  286 AGSTASTAVLL-GDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIQEAGGFVIW--AGTWRVGGVLAVSRAFGDRLLK-QYVVAEPEIQEEEIDGVD--FIIIASDGLWNVISNRDAVAMVEHITDAEAASRKLIKEAYARGSSDNITCVVVRF 750
            +G+TA+ A+L  G  L+VA+VGDSR +  R G  + L+ DH P+R DE++RI++ GGFV W   G   V G LA++R+ GD  LK   V+AEPE    ++   D  F+++ +DG+  ++++++    V    D + A+  + ++A   G+ DN T VVV F
Sbjct:  186 SGTTATVALLRDGVELVVASVGDSRALLCRKGKPMKLTTDHTPERKDEKERIKKFGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKASGVIAEPETTRIKLYHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPKEAAHSVTEQAIQYGTEDNSTAVVVPF 346          
The following BLAST results are available for this feature:
BLAST of CN187100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
PPM1K_BOVIN2.515e-2237.89Protein phosphatase 1K, mitochondrial OS=Bos tauru... [more]
PPM1K_XENLA4.289e-2237.50Protein phosphatase 1K, mitochondrial OS=Xenopus l... [more]
P2C22_ARATH7.316e-2238.89Probable protein phosphatase 2C 22 OS=Arabidopsis ... [more]
P2C11_ORYSJ9.555e-2237.97Probable protein phosphatase 2C 11 OS=Oryza sativa... [more]
P2C02_ORYSJ9.555e-2237.50Probable protein phosphatase 2C 2 OS=Oryza sativa ... [more]
P2C58_ORYSJ1.248e-2137.43Probable protein phosphatase 2C 58 OS=Oryza sativa... [more]
P2C43_ARATH1.630e-2135.98Probable protein phosphatase 2C 43 OS=Arabidopsis ... [more]
P2C42_ORYSJ2.129e-2138.60Probable protein phosphatase 2C 42 OS=Oryza sativa... [more]
PP2C_LEICH2.780e-2139.33Protein phosphatase 2C OS=Leishmania chagasi PE=2 ... [more]
PPM1K_MOUSE4.742e-2137.89Protein phosphatase 1K, mitochondrial OS=Mus muscu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003P03_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003P03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187100 ID=CN187100; Name=CN187100; organism=Citrus sinensis; type=EST; length=771bp
TTTTTTTTTTTTTTTTTAATGTTAATAATTTGCAGAATAAATACCTTTTA
AAGAACATTGAGGCAAATAACAACCAAGGGCTAATCATACATTAACAGAG
CAACCAGGACTAACTTCTTGAAAACTGAGCTGTAGCCCGGCACAATAATC
AACTAATAACAGTTTTTCGAAAAATGTAATGGGAAAATGCATCAATGAAT
ATTTCTTCTCTCTCTGGCTTGGCCGCCGTTCAAAGCCTATATAAAAACCG
CAAGAAAAAGTCAAGGGGTCTGGTCATGAGTTCTCAAACCGAACAACGAC
ACAAGTAATGTTGTCAGAGCTCCCACGTGCATAAGCTTCTTTGATGAGCT
TCCTTGATGCTGCTTCTGCATCGGTTATGTGTTCCACCATTGCAACAGCA
TCCCTATTTGATATGACATTCCAAAGTCCATCACTAGCAATGATTATAAA
GTCGACACCATCAATTTCTTCTTCCTGAATTTCTGGCTCGGCAACGACAT
ATTGCTTAAGTAATCTGTCCCCAAATGCACGAGAAACAGCAAGAACACCA
CCAACCCGCCATGTTCCTGCCCAAATAACAAAACCTCCAGCCTCTTGAAT
TCTTTGTCGTTCATCAGATCGATCAGGTTTATGATCAATAGACAGTGGAA
TAGCTGAGCCAGCTCTGGAGGCCACCACTCTGGAATCACCAACATTTGCA
ACAAGCAGCCGATCCCCTAACAGCACAGCAGTTGAAGCAGTTGACCCAGC
ATCTTTGTGCTGGCCTTTTTC
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