CN187100

Overview
NameCN187100
Unique NameCN187100
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length771
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187100 vs. ExPASy Swiss-Prot
Match: P2C13_ARATH (Probable protein phosphatase 2C 13 OS=Arabidopsis thaliana GN=At1g48040 PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 4.742e-21
Identity = 65/168 (38.69%), Postives = 97/168 (57.74%), Query Frame = -1
Query:  280 GSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIQEAGGFVIWAGTWRVGGVLAVSRAFGDRLLKQYVV--AEPEIQEEEIDGV------DFIIIASDGLWNVISNRDAVAMV----EHITDAEAASRKLIKEAYARGSSDNITCVVVRFEN 747
            G+TA TA+++G  LLVAN GD R V  R G A+ +S DH+     ER+RI++ GG+        + GVLAV+RA GD  LK      + P I + EI  +      +F+I+A DG+W+V+S+++AV+ V        D    + +L KEA    SSDN+T +V+ F +
Sbjct:  187 GTTALTALIIGRHLLVANAGDCRAVLCRRGVAVDMSFDHRSTYEPERRRIEDLGGYF---EDGYLNGVLAVTRAIGDWELKNPFTDSSSPLISDPEIGQIILTEDDEFLILACDGIWDVLSSQNAVSNVRQGLRRHGDPRQCAMELGKEAARLQSSDNMTVIVICFSS 351          
BLAST of CN187100 vs. ExPASy Swiss-Prot
Match: P2C47_ORYSJ (Probable protein phosphatase 2C 47 OS=Oryza sativa subsp. japonica GN=Os05g0134200 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.194e-21
Identity = 63/188 (33.51%), Postives = 109/188 (57.98%), Query Frame = -1
Query:  226 KDAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIQEAGGFVIWAGTWRVGGVLAVSRAFGDRLLK------QYVVAEPEIQEEEI-DGVDFIIIASDGLWNVISNRDAVAMV----EHITDAEAASRKLIKEAYARGSSDNITCVVVRFENS*PDPLTFSCGFYIGFER 756
            + +G+TA TA++ G +LLVAN GD R V  R G A+ +S DH+ + ++E +R+  +GG++       + GVL+V+RA GD  +K        ++AEPE ++  + +  +F+I+  DG+W+V++++ AV++V        D E  +R+L+ EA    ++DN+T +VV F +    P     G   G  R
Sbjct:  182 RSSGTTALTALVFGRQLLVANAGDCRAVLCRRGVAMEMSRDHRANYAEECERVAASGGYI---EDGYLNGVLSVTRALGDWDMKMPDGSISPLIAEPEFRQTMLTEDDEFLIMGCDGIWDVMTSQHAVSIVRRGLRQHDDPERCARELVMEAKRLETADNLTVIVVCFVSELGSPRQEQVGGQAGVAR 366          
BLAST of CN187100 vs. ExPASy Swiss-Prot
Match: PPM1G_MOUSE (Protein phosphatase 1G OS=Mus musculus GN=Ppm1g PE=2 SV=3)

HSP 1 Score: 100.908 bits (250), Expect = 8.089e-21
Identity = 65/183 (35.52%), Postives = 101/183 (55.19%), Query Frame = -1
Query:  283 DAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIQEAGGFVIWAGTWRVGGVLAVSRAFGDRLLK---------QYVVAEPEIQEEEI-DGVDFIIIASDGLWNVISNRDAVAMVE----------HITDAEAASRKLIKEAYARGSS------DNITCVVVRFE 753
            D+G+TA  A++ G +L+VAN GDSR V S AG A+ +S DHKP+   E  RI+ AGG V   G  RV G L +SRA GD   K         Q + A P+I+   + D  +F++IA DG+WNV+S+++ V  ++           +    +   +L+ +  A  +S      DN+TC+++ F+
Sbjct:  323 DSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDG--RVNGGLNLSRAIGDHFYKRNKNLPPQEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIIICFK 503          
BLAST of CN187100 vs. ExPASy Swiss-Prot
Match: PPM1G_MACFA (Protein phosphatase 1G OS=Macaca fascicularis GN=PPM1G PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.089e-21
Identity = 65/183 (35.52%), Postives = 101/183 (55.19%), Query Frame = -1
Query:  283 DAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIQEAGGFVIWAGTWRVGGVLAVSRAFGDRLLK---------QYVVAEPEIQEEEI-DGVDFIIIASDGLWNVISNRDAVAMVE----------HITDAEAASRKLIKEAYARGSS------DNITCVVVRFE 753
            D+G+TA  A++ G +L+VAN GDSR V S AG A+ +S DHKP+   E  RI+ AGG V   G  RV G L +SRA GD   K         Q + A P+I+   + D  +F++IA DG+WNV+S+++ V  ++           +    +   +L+ +  A  +S      DN+TC+++ F+
Sbjct:  327 DSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDG--RVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIIICFK 507          
BLAST of CN187100 vs. ExPASy Swiss-Prot
Match: PPM1G_HUMAN (Protein phosphatase 1G OS=Homo sapiens GN=PPM1G PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.089e-21
Identity = 65/183 (35.52%), Postives = 101/183 (55.19%), Query Frame = -1
Query:  283 DAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIQEAGGFVIWAGTWRVGGVLAVSRAFGDRLLK---------QYVVAEPEIQEEEI-DGVDFIIIASDGLWNVISNRDAVAMVE----------HITDAEAASRKLIKEAYARGSS------DNITCVVVRFE 753
            D+G+TA  A++ G +L+VAN GDSR V S AG A+ +S DHKP+   E  RI+ AGG V   G  RV G L +SRA GD   K         Q + A P+I+   + D  +F++IA DG+WNV+S+++ V  ++           +    +   +L+ +  A  +S      DN+TC+++ F+
Sbjct:  326 DSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDG--RVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIIICFK 506          
BLAST of CN187100 vs. ExPASy Swiss-Prot
Match: PPM1G_BOVIN (Protein phosphatase 1G OS=Bos taurus GN=PPM1G PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.056e-20
Identity = 64/183 (34.97%), Postives = 101/183 (55.19%), Query Frame = -1
Query:  283 DAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIQEAGGFVIWAGTWRVGGVLAVSRAFGDRLLK---------QYVVAEPEIQEEEI-DGVDFIIIASDGLWNVISNRDAVAMVE----------HITDAEAASRKLIKEAYARGSS------DNITCVVVRFE 753
            D+G+TA  A++ G +L+VAN GDSR V S AG A+ +S DHKP+   E  RI+ AGG V   G  RV G L +SRA GD   K         Q + A P+I+   + D  +F++IA DG+WNV+S+++ +  ++           +    +   +L+ +  A  +S      DN+TC+++ F+
Sbjct:  324 DSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDG--RVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVIDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIIICFK 504          
BLAST of CN187100 vs. ExPASy Swiss-Prot
Match: PPMBL_MOUSE (Probable protein phosphatase 1B-like OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.380e-20
Identity = 67/171 (39.18%), Postives = 94/171 (54.97%), Query Frame = -1
Query:  286 DAGSTASTAVLLGDRLL-VANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIQEAGGFVIWAGTWRVGGVLAVSRAFGDRLLKQYVVAEPEIQ----EEEI------DGVDFIIIASDGLWNVISNRDAVAMVEHI----TDAEAASRKLIKEAYARGSSDNITCVVVRF 753
            D G + + A+L+  R L +A+ GDSR + SR+GS    + DH+P R  ER+RI +AGG V      RV G LAVSRA GD   KQ     PE+Q    E E+      D  +F+++ASDG+W+ +S  D   +V        D E    +L+     +GS DN+TC+VV F
Sbjct:  152 DPGGSTAVALLVSPRFLYLAHCGDSRALLSRSGSVAFCTEDHRPHRPRERERIHDAGGTV---RRRRVEGSLAVSRALGDFAYKQAPGRPPELQLVSAEPEVAALARQDEDEFVLLASDGVWDALSGADLAGLVTSRLRLGLDLELLCAQLLDTCLCKGSLDNMTCMVVCF 319          
BLAST of CN187100 vs. ExPASy Swiss-Prot
Match: P2C37_ORYSJ (Probable protein phosphatase 2C 37 OS=Oryza sativa subsp. japonica GN=Os04g0167900 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.802e-20
Identity = 69/200 (34.50%), Postives = 96/200 (48.00%), Query Frame = -1
Query:  280 GSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHK----------------------------------------PDRSDERQRIQEAGGFVIWAGTWRVGGVLAVSRAFGDRLLKQYVVAEPE--IQEEEIDGVDFIIIASDGLWNVISNRDAVAMVEHITD--AEAASRKLIKEAYARGSSDNITCVVVRFEN 747
            GSTA  A+L+ DRL+V+N GDSR V  RAG  +PLS DHK                                        PDR DE+ RI+  GG V++    RV G+LA+SRA GD+ LK  V+ EP+  I    +D  + +I+ASDG+W+VISN  A  +     +  +  + R+  +   A  SS       V  E+
Sbjct:  241 GSTAVVALLVRDRLVVSNCGDSRAVLCRAGDPLPLSSDHKGLNPSLSWRGTRVALARGTWGDKTGQSVGPAALLLSGGAHPDRPDEKARIEAVGGRVVYLNGPRVRGILAMSRALGDKYLKPEVICEPDITITVRTVDD-ECLILASDGMWDVISNETASDVARQCLEDGSPTSGRRAARSGEAASSSAGAPAAAVGQES 439          
BLAST of CN187100 vs. ExPASy Swiss-Prot
Match: P2C48_ORYSJ (Probable protein phosphatase 2C 48 OS=Oryza sativa subsp. japonica GN=Os05g0358500 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.074e-20
Identity = 63/161 (39.13%), Postives = 93/161 (57.76%), Query Frame = -1
Query:  334 AGSTASTAVLLGDRLLVANVGDSRVVASRAG---------SAIPLSIDHKPDRSDERQRIQEAGGFV-----------IWAGTWRVGGVLAVSRAFGDRLLKQY-VVAEPEIQEEEIDGVD-FIIIASDGLWNVISNRDAVAMVEHITDAEAASRKLIKEA 750
            +G TA + V  GD L+VANVGDSR V + A          +A+ L++D KP+   ER+RI E  G V           +W    R G  LA+SRAFGD  +K Y V++ PE+    I   D F+I+A+DG+W+V+SN +AV +V    + E A+++L++ A
Sbjct:  166 SGCTALSLVKHGDLLVVANVGDSRAVLATASPDDGGGARLAAVQLTVDFKPNLPQERERIMECNGRVQCLADEPGVHRVWRPD-REGPGLAMSRAFGDYCVKDYGVISAPEVTHRRITAQDHFVILATDGVWDVVSNEEAVQIVASAPEREKAAKRLVEFA 325          
BLAST of CN187100 vs. ExPASy Swiss-Prot
Match: P2C41_ARATH (Probable protein phosphatase 2C 41 OS=Arabidopsis thaliana GN=At3g16800 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.074e-20
Identity = 60/157 (38.22%), Postives = 96/157 (61.15%), Query Frame = -1
Query:  334 AGSTASTAVLLGDRLLVANVGDSRVVASRAGS------AIPLSIDHKPDRSDERQRIQEAGGFVIWA----GTWRVGGV------LAVSRAFGDRLLKQY-VVAEPEIQEEEIDGVD-FIIIASDGLWNVISNRDAVAMVEHITDAEAASRKLIKEA 750
            +G TA TAVL GD L++AN GDSR V +           + LS+D KP+  +E +RI+++ G +       G +RVG        LAVSRAFGD  LK + +V+EPE+   +I   D F+I+A+DG+W+V++N +AV +V  + +   ++++L++ A
Sbjct:  169 SGCTALTAVLQGDHLVIANAGDSRAVIATTSDDGNGLVPVQLSVDFKPNIPEEAERIKQSDGRLFCLDDEPGVYRVGMPNGGSLGLAVSRAFGDYCLKDFGLVSEPEVTYRKITDKDQFLILATDGMWDVMTNNEAVEIVRGVKERRKSAKRLVERA 325          
The following BLAST results are available for this feature:
BLAST of CN187100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
P2C13_ARATH4.742e-2138.69Probable protein phosphatase 2C 13 OS=Arabidopsis ... [more]
P2C47_ORYSJ6.194e-2133.51Probable protein phosphatase 2C 47 OS=Oryza sativa... [more]
PPM1G_MOUSE8.089e-2135.52Protein phosphatase 1G OS=Mus musculus GN=Ppm1g PE... [more]
PPM1G_MACFA8.089e-2135.52Protein phosphatase 1G OS=Macaca fascicularis GN=P... [more]
PPM1G_HUMAN8.089e-2135.52Protein phosphatase 1G OS=Homo sapiens GN=PPM1G PE... [more]
PPM1G_BOVIN1.056e-2034.97Protein phosphatase 1G OS=Bos taurus GN=PPM1G PE=2... [more]
PPMBL_MOUSE1.380e-2039.18Probable protein phosphatase 1B-like OS=Mus muscul... [more]
P2C37_ORYSJ1.802e-2034.50Probable protein phosphatase 2C 37 OS=Oryza sativa... [more]
P2C48_ORYSJ3.074e-2039.13Probable protein phosphatase 2C 48 OS=Oryza sativa... [more]
P2C41_ARATH3.074e-2038.22Probable protein phosphatase 2C 41 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003P03_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003P03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187100 ID=CN187100; Name=CN187100; organism=Citrus sinensis; type=EST; length=771bp
TTTTTTTTTTTTTTTTTAATGTTAATAATTTGCAGAATAAATACCTTTTA
AAGAACATTGAGGCAAATAACAACCAAGGGCTAATCATACATTAACAGAG
CAACCAGGACTAACTTCTTGAAAACTGAGCTGTAGCCCGGCACAATAATC
AACTAATAACAGTTTTTCGAAAAATGTAATGGGAAAATGCATCAATGAAT
ATTTCTTCTCTCTCTGGCTTGGCCGCCGTTCAAAGCCTATATAAAAACCG
CAAGAAAAAGTCAAGGGGTCTGGTCATGAGTTCTCAAACCGAACAACGAC
ACAAGTAATGTTGTCAGAGCTCCCACGTGCATAAGCTTCTTTGATGAGCT
TCCTTGATGCTGCTTCTGCATCGGTTATGTGTTCCACCATTGCAACAGCA
TCCCTATTTGATATGACATTCCAAAGTCCATCACTAGCAATGATTATAAA
GTCGACACCATCAATTTCTTCTTCCTGAATTTCTGGCTCGGCAACGACAT
ATTGCTTAAGTAATCTGTCCCCAAATGCACGAGAAACAGCAAGAACACCA
CCAACCCGCCATGTTCCTGCCCAAATAACAAAACCTCCAGCCTCTTGAAT
TCTTTGTCGTTCATCAGATCGATCAGGTTTATGATCAATAGACAGTGGAA
TAGCTGAGCCAGCTCTGGAGGCCACCACTCTGGAATCACCAACATTTGCA
ACAAGCAGCCGATCCCCTAACAGCACAGCAGTTGAAGCAGTTGACCCAGC
ATCTTTGTGCTGGCCTTTTTC
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