CN187094

Overview
NameCN187094
Unique NameCN187094
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187094 vs. ExPASy Swiss-Prot
Match: FBRL_YEAST (rRNA 2'-O-methyltransferase fibrillarin OS=Saccharomyces cerevisiae GN=NOP1 PE=1 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 7.159e-63
Identity = 115/158 (72.78%), Postives = 137/158 (86.71%), Query Frame = 3
Query:  240 SKVVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQN---EDG---TKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIF 695
            +KVV+EPHRH GV+IA+GKED LVTKN+  GE+VY EKRISV+    EDG   TKVEYR+WNPFRSKLAA ++GG+D ++I PG +VLYLGAASGT+VSHVSD+VGP GVVYAVEFSHR GR+L++MAKKR N+IPIIEDARHP KYRML+GMVD +F
Sbjct:   84 AKVVIEPHRHAGVYIARGKEDLLVTKNMAPGESVYGEKRISVEEPSKEDGVPPTKVEYRVWNPFRSKLAAGIMGGLDELFIAPGKKVLYLGAASGTSVSHVSDVVGPEGVVYAVEFSHRPGRELISMAKKRPNIIPIIEDARHPQKYRMLIGMVDCVF 241          
BLAST of CN187094 vs. ExPASy Swiss-Prot
Match: FBRL3_ARATH (Putative rRNA 2'-O-methyltransferase fibrillarin 3 OS=Arabidopsis thaliana GN=FIB3 PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.221e-62
Identity = 118/152 (77.63%), Postives = 130/152 (85.53%), Query Frame = 3
Query:  240 SKVVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIF 695
            SKV+V PHRH GVF+AK K DALVTKNLV GE +YNEKRI VQNED + VEYR+WNP RSKLA A+  GVDNIWIKPG +VLYLGA+SG TVSHVSDIVGP G VYAVE S   G+ L+NMA+KRTNVIPIIEDARHPAKYRMLVGMVD+IF
Sbjct:   57 SKVLVTPHRHAGVFVAKSKADALVTKNLVPGEIIYNEKRIFVQNEDRSTVEYRVWNPHRSKLADAITTGVDNIWIKPGVKVLYLGASSGYTVSHVSDIVGPEGCVYAVEHSDICGKVLMNMAEKRTNVIPIIEDARHPAKYRMLVGMVDIIF 208          
BLAST of CN187094 vs. ExPASy Swiss-Prot
Match: FBLL1_MOUSE (rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1 OS=Mus musculus GN=Fbll1 PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.595e-62
Identity = 116/150 (77.33%), Postives = 134/150 (89.33%), Query Frame = 3
Query:  246 VVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIF 695
            V VEPHRHEGVFI +G EDALVT N+V G +VY EKR++V  E+G K EYR WNPFRSKLAAA+LGGVD I IKP ++VLYLGAASGTTVSHVSDI+GP+G+VYAVEFSHR+GRDLVN+AKKRTN+IP++EDARHP KYRML+GMVDVIF
Sbjct:   80 VSVEPHRHEGVFIYRGAEDALVTLNMVPGVSVYGEKRVTVM-ENGEKQEYRTWNPFRSKLAAAILGGVDQIHIKPKSKVLYLGAASGTTVSHVSDIIGPDGLVYAVEFSHRAGRDLVNVAKKRTNIIPVLEDARHPLKYRMLIGMVDVIF 228          
BLAST of CN187094 vs. ExPASy Swiss-Prot
Match: FBLL1_HUMAN (rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1 OS=Homo sapiens GN=FBLL1 PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.595e-62
Identity = 115/150 (76.67%), Postives = 134/150 (89.33%), Query Frame = 3
Query:  246 VVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIF 695
            V VEPHRHEGVFI +G EDALVT N+V G++VY E+R++V  E G K EYR WNPFRSKLAAA+LGGVD I IKP ++VLYLGAASGTTVSHVSDI+GP+G+VYAVEFSHR+GRDLVN+AKKRTN+IP++EDARHP KYRML+GMVDVIF
Sbjct:   98 VSVEPHRHEGVFIYRGAEDALVTLNMVPGQSVYGERRVTV-TEGGVKQEYRTWNPFRSKLAAAILGGVDQIHIKPKSKVLYLGAASGTTVSHVSDIIGPDGLVYAVEFSHRAGRDLVNVAKKRTNIIPVLEDARHPLKYRMLIGMVDVIF 246          
BLAST of CN187094 vs. ExPASy Swiss-Prot
Match: FBRL_ASHGO (rRNA 2'-O-methyltransferase fibrillarin OS=Ashbya gossypii GN=NOP1 PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 6.060e-62
Identity = 113/158 (71.52%), Postives = 138/158 (87.34%), Query Frame = 3
Query:  240 SKVVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQ---NEDG---TKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIF 695
            +KVV+EPH+H GVFIA+GKED LVTKN+  GE+VY EKRISV+   +E+G   TKVEYR+WNPFRSKLAA ++GG+D ++I PG +VLYLGAASGT+VSHV+D+VGP G+VYAVEFSHR GR+L++MAKKR NVIPIIEDARHP KYRML+GMVD +F
Sbjct:   85 AKVVIEPHKHAGVFIARGKEDLLVTKNVAPGESVYGEKRISVEEPASEEGVPPTKVEYRVWNPFRSKLAAGIMGGLDELFIAPGKKVLYLGAASGTSVSHVADVVGPEGLVYAVEFSHRPGRELISMAKKRPNVIPIIEDARHPQKYRMLIGMVDAVF 242          
BLAST of CN187094 vs. ExPASy Swiss-Prot
Match: FBRL_CAEEL (rRNA 2'-O-methyltransferase fibrillarin OS=Caenorhabditis elegans GN=fib-1 PE=2 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 3.008e-61
Identity = 112/150 (74.67%), Postives = 132/150 (88.00%), Query Frame = 3
Query:  246 VVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIF 695
            VVVEPHR  GVFI KGKEDAL TKN+V GE+VY EKR+SV +  G+ +EYR+WNPFRSKLAA+++GG++N  IKPG ++LYLGAASGTTVSH SD+VGP G+VYAVEFSHRSGRDL+ +AKKR NV+PI+EDARHP KYRMLVGMVDVIF
Sbjct:  117 VVVEPHRLGGVFIVKGKEDALATKNMVVGESVYGEKRVSVDDGAGS-IEYRVWNPFRSKLAASIMGGLENTHIKPGTKLLYLGAASGTTVSHCSDVVGPEGIVYAVEFSHRSGRDLLGVAKKRPNVVPIVEDARHPHKYRMLVGMVDVIF 265          
BLAST of CN187094 vs. ExPASy Swiss-Prot
Match: FBRL_DEBHA (rRNA 2'-O-methyltransferase fibrillarin OS=Debaryomyces hansenii GN=NOP1 PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 3.928e-61
Identity = 110/158 (69.62%), Postives = 135/158 (85.44%), Query Frame = 3
Query:  240 SKVVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQN---EDG---TKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIF 695
            +KVV+EPHRH GVFIA+GKED LVT+N+  GE+VY EKRIS++    E+G   TK+EYR+WNPFRSKLAA ++GG+D + I PG +VLYLGAASGT+VSHV+D+VGP G+VYAVEFSHR GR+L+ MAKKR NVIPII+DARHP KYRML+GMVD +F
Sbjct:   86 AKVVIEPHRHAGVFIARGKEDLLVTRNIAPGESVYGEKRISIEEPSKEEGAAPTKIEYRVWNPFRSKLAAGIMGGIDELGIAPGKKVLYLGAASGTSVSHVADVVGPEGMVYAVEFSHRPGRELIGMAKKRPNVIPIIDDARHPQKYRMLIGMVDAVF 243          
BLAST of CN187094 vs. ExPASy Swiss-Prot
Match: FBRL_TETTH (rRNA 2'-O-methyltransferase fibrillarin OS=Tetrahymena thermophila GN=FIB PE=2 SV=2)

HSP 1 Score: 231.491 bits (589), Expect = 3.325e-60
Identity = 111/151 (73.51%), Postives = 133/151 (88.08%), Query Frame = 3
Query:  243 KVVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIF 695
            K ++  HR EGVFI KG+++ALVTKN   GE+VYNEKR+SV+ E+G K+EYR+WNP+RSK+AAAV+GG+ +I IKPG++VLYLG ASGTTVSHV+DIVGP GVVYAVEFSHRSGRDLVNMAKKRTNV+PII DAR P +YR LVGMVDV+F
Sbjct:   64 KTIIVKHRLEGVFICKGQQEALVTKNFFPGESVYNEKRMSVE-ENGEKIEYRVWNPYRSKIAAAVVGGISDIHIKPGSKVLYLGGASGTTVSHVADIVGPTGVVYAVEFSHRSGRDLVNMAKKRTNVVPIIGDARKPQEYRFLVGMVDVVF 213          
BLAST of CN187094 vs. ExPASy Swiss-Prot
Match: FBRL_NEUCR (rRNA 2'-O-methyltransferase fibrillarin OS=Neurospora crassa GN=nop-1 PE=3 SV=2)

HSP 1 Score: 230.72 bits (587), Expect = 5.672e-60
Identity = 116/158 (73.42%), Postives = 136/158 (86.08%), Query Frame = 3
Query:  243 KVVVEPHRHEGVFIAKG-KEDALVTKNLVAGEAVYNEKRISVQN---EDG---TKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIF 695
            KV+VEPHRH+GVF+A+G KED L T NLV GE+VY EKRISV+N   E+G   TK EYRIWNPFRSKLAA +LGG++ I++KPG++VLYLGAASGT+VSHV+DIVGP G VYAVEFSHRSGRDL+NMA +RTNVIPI+EDAR P  YRML+ MVDVIF
Sbjct:   79 KVIVEPHRHKGVFVARGGKEDLLATVNLVPGESVYGEKRISVENASKEEGGASTKTEYRIWNPFRSKLAAGILGGLETIYMKPGSKVLYLGAASGTSVSHVADIVGPTGSVYAVEFSHRSGRDLINMATRRTNVIPIVEDARKPMAYRMLLPMVDVIF 236          
BLAST of CN187094 vs. ExPASy Swiss-Prot
Match: FBRL_DICDI (rRNA 2'-O-methyltransferase fibrillarin OS=Dictyostelium discoideum GN=fbl PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 5.309e-58
Identity = 111/153 (72.55%), Postives = 128/153 (83.66%), Query Frame = 3
Query:  240 SKVVVEPH-RHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIF 695
            +KV+VE H RHEGVFI +GKE++L T N V GE+VY EKR+SV  E   K EYRIWNPFRSK+AA +  GVD I IKPG++VLY+GAASGTT+SHVSDIVGP GVVY +E SHR GRDL+ MAKKRTNVIPIIEDARHP KYRML+GMVDV+F
Sbjct:   95 AKVIVEKHPRHEGVFIVRGKEESLATLNSVPGESVYGEKRVSV-GEGEDKKEYRIWNPFRSKIAAGLHRGVDEIHIKPGSKVLYIGAASGTTISHVSDIVGPTGVVYGIELSHRPGRDLIGMAKKRTNVIPIIEDARHPQKYRMLIGMVDVVF 246          
The following BLAST results are available for this feature:
BLAST of CN187094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
FBRL_YEAST7.159e-6372.78rRNA 2'-O-methyltransferase fibrillarin OS=Sacchar... [more]
FBRL3_ARATH1.221e-6277.63Putative rRNA 2'-O-methyltransferase fibrillarin 3... [more]
FBLL1_MOUSE1.595e-6277.33rRNA/tRNA 2'-O-methyltransferase fibrillarin-like ... [more]
FBLL1_HUMAN1.595e-6276.67rRNA/tRNA 2'-O-methyltransferase fibrillarin-like ... [more]
FBRL_ASHGO6.060e-6271.52rRNA 2'-O-methyltransferase fibrillarin OS=Ashbya ... [more]
FBRL_CAEEL3.008e-6174.67rRNA 2'-O-methyltransferase fibrillarin OS=Caenorh... [more]
FBRL_DEBHA3.928e-6169.62rRNA 2'-O-methyltransferase fibrillarin OS=Debaryo... [more]
FBRL_TETTH3.325e-6073.51rRNA 2'-O-methyltransferase fibrillarin OS=Tetrahy... [more]
FBRL_NEUCR5.672e-6073.42rRNA 2'-O-methyltransferase fibrillarin OS=Neurosp... [more]
FBRL_DICDI5.309e-5872.55rRNA 2'-O-methyltransferase fibrillarin OS=Dictyos... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003O21_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003O21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187094 ID=CN187094; Name=CN187094; organism=Citrus sinensis; type=EST; length=697bp
ATGTTCACTCTTTGTATTCTTTGTAGCCGGACAGAGCATCAAACATGAGA
CCTCCAAGAGGACGCGGTGGTGGAGGTGGGTTCAGGGGAGGCAGAGGTGA
TGGAGGAGGAAGAGGAAGAGGTGGCGGCCGAGGTGGTGGAGGTGGAAGAG
GTGGTAGCGCTATGAGAGGCCGAGGTGGCGGTCGTGGCGGTGGCCGAGGT
GGAGGAAGAGGCCGCGGTGGTGGAGGAATGAAGGGTGGAAGCAAGGTTGT
AGTTGAGCCTCATAGACACGAAGGAGTGTTCATTGCCAAGGGCAAAGAAG
ACGCCCTTGTCACTAAGAATCTCGTCGCCGGTGAGGCTGTATACAATGAG
AAGAGGATCTCCGTCCAGAATGAAGATGGAACCAAAGTTGAGTATAGAAT
TTGGAATCCCTTCCGTTCCAAATTAGCTGCAGCTGTTCTTGGTGGTGTTG
ATAATATTTGGATTAAACCTGGTGCTAGGGTTCTATACCTTGGTGCTGCT
TCCGGCACAACTGTCTCTCATGTTTCTGACATTGTTGGCCCTAATGGAGT
AGTTTATGCAGTGGAATTTTCTCATAGAAGTGGTAGAGACTTGGTCAATA
TGGCAAAGAAGAGAACTAATGTTATACCCATAATTGAAGATGCTAGACAT
CCTGCCAAGTACCGTATGTTGGTCGGTATGGTAGATGTAATATTTTC
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