CN187093

Overview
NameCN187093
Unique NameCN187093
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187093 vs. ExPASy Swiss-Prot
Match: FBLL1_HUMAN (rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1 OS=Homo sapiens GN=FBLL1 PE=3 SV=1)

HSP 1 Score: 342.428 bits (877), Expect = 1.765e-93
Identity = 170/225 (75.56%), Postives = 198/225 (88.00%), Query Frame = -3
Query:  145 GVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQEQFKPFEQVTLEPFERDHACVVGGYR-MPK 816
            GVFI +G EDALVT N+V G++VY E+R++V  E G K EYR WNPFRSKLAAA+LGGVD I IKP ++VLYLGAASGTTVSHVSDI+GP+G+VYAVEFSHR+GRDLVN+AKKRTN+IP++EDARHP KYRML+GMVDVIF+DVAQPDQ+RI+ALNA  FL+ GGHF+ISIKANCIDST  AEAVF SEV+KLQQE  KP EQ+TLEP+ERDHA VVG YR +PK
Sbjct:  107 GVFIYRGAEDALVTLNMVPGQSVYGERRVTV-TEGGVKQEYRTWNPFRSKLAAAILGGVDQIHIKPKSKVLYLGAASGTTVSHVSDIIGPDGLVYAVEFSHRAGRDLVNVAKKRTNIIPVLEDARHPLKYRMLIGMVDVIFADVAQPDQSRIVALNAHTFLRNGGHFLISIKANCIDSTASAEAVFASEVRKLQQENLKPQEQLTLEPYERDHAVVVGVYRPLPK 330          
BLAST of CN187093 vs. ExPASy Swiss-Prot
Match: FBRL_CAEEL (rRNA 2'-O-methyltransferase fibrillarin OS=Caenorhabditis elegans GN=fib-1 PE=2 SV=1)

HSP 1 Score: 340.502 bits (872), Expect = 6.706e-93
Identity = 167/227 (73.57%), Postives = 194/227 (85.46%), Query Frame = -3
Query:  136 GVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQEQFKPFEQVTLEPFERDHACVVGGYRMPKKQK 816
            GVFI KGKEDAL TKN+V GE+VY EKR+SV +  G+ +EYR+WNPFRSKLAA+++GG++N  IKPG ++LYLGAASGTTVSH SD+VGP G+VYAVEFSHRSGRDL+ +AKKR NV+PI+EDARHP KYRMLVGMVDVIFSDVAQPDQARI+ALNA  FL+ GGH VISIKANCIDST   EAVF  EV KL++E+FKP EQVTLEP+ERDHA VV  YR  K +K
Sbjct:  126 GVFIVKGKEDALATKNMVVGESVYGEKRVSVDDGAGS-IEYRVWNPFRSKLAASIMGGLENTHIKPGTKLLYLGAASGTTVSHCSDVVGPEGIVYAVEFSHRSGRDLLGVAKKRPNVVPIVEDARHPHKYRMLVGMVDVIFSDVAQPDQARIVALNAQNFLRNGGHAVISIKANCIDSTAEPEAVFAGEVNKLKEEKFKPLEQVTLEPYERDHAVVVAVYRPVKGKK 351          
BLAST of CN187093 vs. ExPASy Swiss-Prot
Match: FBRL3_ARATH (Putative rRNA 2'-O-methyltransferase fibrillarin 3 OS=Arabidopsis thaliana GN=FIB3 PE=2 SV=1)

HSP 1 Score: 332.028 bits (850), Expect = 2.385e-90
Identity = 164/225 (72.89%), Postives = 188/225 (83.56%), Query Frame = -3
Query:  142 GVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQEQFKPFEQVTLEPFERDHACVVGGYRMPKK 816
            GVF+AK K DALVTKNLV GE +YNEKRI VQNED + VEYR+WNP RSKLA A+  GVDNIWIKPG +VLYLGA+SG TVSHVSDIVGP G VYAVE S   G+ L+NMA+KRTNVIPIIEDARHPAKYRMLVGMVD+IFSDV  P+QA IL+LNASYFLK+GGHF+ISIKAN IDST+ AE V+Q EV+KLQ E+ +P E + L+  E  HACV GGYR+P+K
Sbjct:   68 GVFVAKSKADALVTKNLVPGEIIYNEKRIFVQNEDRSTVEYRVWNPHRSKLADAITTGVDNIWIKPGVKVLYLGASSGYTVSHVSDIVGPEGCVYAVEHSDICGKVLMNMAEKRTNVIPIIEDARHPAKYRMLVGMVDIIFSDVNHPEQANILSLNASYFLKSGGHFMISIKANSIDSTIAAETVYQMEVEKLQMEELRPTEILHLDSCEEKHACVFGGYRLPRK 292          
BLAST of CN187093 vs. ExPASy Swiss-Prot
Match: FBRL_TETTH (rRNA 2'-O-methyltransferase fibrillarin OS=Tetrahymena thermophila GN=FIB PE=2 SV=2)

HSP 1 Score: 328.176 bits (840), Expect = 3.444e-89
Identity = 159/221 (71.95%), Postives = 191/221 (86.43%), Query Frame = -3
Query:  154 GVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQEQFKPFEQVTLEPFERDHACVVGGYR 816
            GVFI KG+++ALVTKN   GE+VYNEKR+SV+ E+G K+EYR+WNP+RSK+AAAV+GG+ +I IKPG++VLYLG ASGTTVSHV+DIVGP GVVYAVEFSHRSGRDLVNMAKKRTNV+PII DAR P +YR LVGMVDV+F+DVAQPDQARI+ +N  YFLK GGHF+ISIKA CIDST     VF +EV+KL++E  KP +Q+TLEP+ERDHA V+G YR
Sbjct:   74 GVFICKGQQEALVTKNFFPGESVYNEKRMSVE-ENGEKIEYRVWNPYRSKIAAAVVGGISDIHIKPGSKVLYLGGASGTTVSHVADIVGPTGVVYAVEFSHRSGRDLVNMAKKRTNVVPIIGDARKPQEYRFLVGMVDVVFADVAQPDQARIMGMNCQYFLKNGGHFLISIKACCIDSTNEPAVVFAAEVQKLKEEGLKPEQQLTLEPYERDHAMVLGSYR 293          
BLAST of CN187093 vs. ExPASy Swiss-Prot
Match: FBRL_CANGA (rRNA 2'-O-methyltransferase fibrillarin OS=Candida glabrata GN=NOP1 PE=3 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 3.444e-89
Identity = 162/226 (71.68%), Postives = 191/226 (84.51%), Query Frame = -3
Query:  157 GVFIAKGKEDALVTKNLVAGEAVYNEKRISVQN---EDG---TKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQEQFKPFEQVTLEPFERDHACVVGGY 816
            GV+IA+GKED LVTKN+  GE+VY EKR+SV+    EDG   TKVEYR+WNPFRSKLAA ++GG+D ++I PG +VLYLGAASGT+VSHVSD+VGP GVVYAVEFSHR GR+L++MAKKR NVIPIIEDARHP KYRMLVGMVD +F+DVAQPDQARI+ALN+  FLK  G  VISIKANCIDSTV AE VF  EV+KL++E+ KP EQ+TLEP+ERDH  V+G Y
Sbjct:   91 GVYIARGKEDLLVTKNMAPGESVYGEKRVSVEEPSKEDGVPPTKVEYRVWNPFRSKLAAGIMGGLDELFIAPGKKVLYLGAASGTSVSHVSDVVGPEGVVYAVEFSHRPGRELISMAKKRPNVIPIIEDARHPQKYRMLVGMVDAVFADVAQPDQARIIALNSHMFLKDQGGVVISIKANCIDSTVDAETVFAREVQKLREEKIKPLEQLTLEPYERDHCIVIGRY 316          
BLAST of CN187093 vs. ExPASy Swiss-Prot
Match: FBRL_YEAST (rRNA 2'-O-methyltransferase fibrillarin OS=Saccharomyces cerevisiae GN=NOP1 PE=1 SV=1)

HSP 1 Score: 327.791 bits (839), Expect = 4.498e-89
Identity = 162/226 (71.68%), Postives = 191/226 (84.51%), Query Frame = -3
Query:  157 GVFIAKGKEDALVTKNLVAGEAVYNEKRISVQN---EDG---TKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQEQFKPFEQVTLEPFERDHACVVGGY 816
            GV+IA+GKED LVTKN+  GE+VY EKRISV+    EDG   TKVEYR+WNPFRSKLAA ++GG+D ++I PG +VLYLGAASGT+VSHVSD+VGP GVVYAVEFSHR GR+L++MAKKR N+IPIIEDARHP KYRML+GMVD +F+DVAQPDQARI+ALN+  FLK  G  VISIKANCIDSTV AE VF  EV+KL++E+ KP EQ+TLEP+ERDH  VVG Y
Sbjct:   95 GVYIARGKEDLLVTKNMAPGESVYGEKRISVEEPSKEDGVPPTKVEYRVWNPFRSKLAAGIMGGLDELFIAPGKKVLYLGAASGTSVSHVSDVVGPEGVVYAVEFSHRPGRELISMAKKRPNIIPIIEDARHPQKYRMLIGMVDCVFADVAQPDQARIIALNSHMFLKDQGGVVISIKANCIDSTVDAETVFAREVQKLREERIKPLEQLTLEPYERDHCIVVGRY 320          
BLAST of CN187093 vs. ExPASy Swiss-Prot
Match: FBRL_ASHGO (rRNA 2'-O-methyltransferase fibrillarin OS=Ashbya gossypii GN=NOP1 PE=3 SV=1)

HSP 1 Score: 325.479 bits (833), Expect = 2.233e-88
Identity = 160/226 (70.80%), Postives = 192/226 (84.96%), Query Frame = -3
Query:  157 GVFIAKGKEDALVTKNLVAGEAVYNEKRISVQ---NEDG---TKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQEQFKPFEQVTLEPFERDHACVVGGY 816
            GVFIA+GKED LVTKN+  GE+VY EKRISV+   +E+G   TKVEYR+WNPFRSKLAA ++GG+D ++I PG +VLYLGAASGT+VSHV+D+VGP G+VYAVEFSHR GR+L++MAKKR NVIPIIEDARHP KYRML+GMVD +F+DVAQPDQARI+ALN+  FLK  G  VISIKANCIDSTV AE VF  EV+KL++E+ KP EQ+TLEP+ERDH  V+G Y
Sbjct:   96 GVFIARGKEDLLVTKNVAPGESVYGEKRISVEEPASEEGVPPTKVEYRVWNPFRSKLAAGIMGGLDELFIAPGKKVLYLGAASGTSVSHVADVVGPEGLVYAVEFSHRPGRELISMAKKRPNVIPIIEDARHPQKYRMLIGMVDAVFADVAQPDQARIIALNSHMFLKDQGGVVISIKANCIDSTVDAETVFAREVQKLREEKIKPLEQLTLEPYERDHCIVIGRY 321          
BLAST of CN187093 vs. ExPASy Swiss-Prot
Match: FBRL_DEBHA (rRNA 2'-O-methyltransferase fibrillarin OS=Debaryomyces hansenii GN=NOP1 PE=3 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 2.468e-87
Identity = 157/226 (69.47%), Postives = 189/226 (83.63%), Query Frame = -3
Query:  157 GVFIAKGKEDALVTKNLVAGEAVYNEKRISVQN---EDG---TKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQEQFKPFEQVTLEPFERDHACVVGGY 816
            GVFIA+GKED LVT+N+  GE+VY EKRIS++    E+G   TK+EYR+WNPFRSKLAA ++GG+D + I PG +VLYLGAASGT+VSHV+D+VGP G+VYAVEFSHR GR+L+ MAKKR NVIPII+DARHP KYRML+GMVD +F+DVAQPDQARI+ALN+  FLK  G  VISIKANCIDSTV AE VF  EV+KL++E+ KP EQ+TLEP+ERDH  VVG Y
Sbjct:   97 GVFIARGKEDLLVTRNIAPGESVYGEKRISIEEPSKEEGAAPTKIEYRVWNPFRSKLAAGIMGGIDELGIAPGKKVLYLGAASGTSVSHVADVVGPEGMVYAVEFSHRPGRELIGMAKKRPNVIPIIDDARHPQKYRMLIGMVDAVFADVAQPDQARIIALNSHLFLKDQGTVVISIKANCIDSTVDAETVFAREVQKLREERIKPLEQLTLEPYERDHCIVVGRY 322          
BLAST of CN187093 vs. ExPASy Swiss-Prot
Match: FBRL_NEUCR (rRNA 2'-O-methyltransferase fibrillarin OS=Neurospora crassa GN=nop-1 PE=3 SV=2)

HSP 1 Score: 311.227 bits (796), Expect = 4.357e-84
Identity = 158/223 (70.85%), Postives = 188/223 (84.30%), Query Frame = -3
Query:  169 GVFIAKG-KEDALVTKNLVAGEAVYNEKRISVQN---EDG---TKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQEQFKPFEQVTLEPFERDHACV 816
            GVF+A+G KED L T NLV GE+VY EKRISV+N   E+G   TK EYRIWNPFRSKLAA +LGG++ I++KPG++VLYLGAASGT+VSHV+DIVGP G VYAVEFSHRSGRDL+NMA +RTNVIPI+EDAR P  YRML+ MVDVIF+DVAQPDQARI+ +NA  FLK GG  +ISIKA+CIDST P E VF SEV+KL++++F P EQ+TLEP+ERDHA V
Sbjct:   89 GVFVARGGKEDLLATVNLVPGESVYGEKRISVENASKEEGGASTKTEYRIWNPFRSKLAAGILGGLETIYMKPGSKVLYLGAASGTSVSHVADIVGPTGSVYAVEFSHRSGRDLINMATRRTNVIPIVEDARKPMAYRMLLPMVDVIFADVAQPDQARIVGINAKLFLKQGGGLLISIKASCIDSTAPPEQVFASEVQKLREDKFFPKEQLTLEPYERDHAMV 311          
BLAST of CN187093 vs. ExPASy Swiss-Prot
Match: FBRL_DICDI (rRNA 2'-O-methyltransferase fibrillarin OS=Dictyostelium discoideum GN=fbl PE=3 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 4.078e-82
Identity = 149/222 (67.12%), Postives = 184/222 (82.88%), Query Frame = -3
Query:  154 GVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGARVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQEQFKPFEQV-TLEPFERDHACVVGGYR 816
            GVFI +GKE++L T N V GE+VY EKR+SV  E   K EYRIWNPFRSK+AA +  GVD I IKPG++VLY+GAASGTT+SHVSDIVGP GVVY +E SHR GRDL+ MAKKRTNVIPIIEDARHP KYRML+GMVDV+F+DVAQP+QA+I+A N++YFLK  GHF+ISIKA+CIDST P E V Q+E+ KL++E+ +P   + TL+P+ER+H+ V+G YR
Sbjct:  107 GVFIVRGKEESLATLNSVPGESVYGEKRVSV-GEGEDKKEYRIWNPFRSKIAAGLHRGVDEIHIKPGSKVLYIGAASGTTISHVSDIVGPTGVVYGIELSHRPGRDLIGMAKKRTNVIPIIEDARHPQKYRMLIGMVDVVFADVAQPNQAQIVAQNSAYFLKNEGHFIISIKASCIDSTAPTEVVVQNEITKLKKEKLRPQHLLKTLDPYERNHSLVIGVYR 327          
The following BLAST results are available for this feature:
BLAST of CN187093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
FBLL1_HUMAN1.765e-9375.56rRNA/tRNA 2'-O-methyltransferase fibrillarin-like ... [more]
FBRL_CAEEL6.706e-9373.57rRNA 2'-O-methyltransferase fibrillarin OS=Caenorh... [more]
FBRL3_ARATH2.385e-9072.89Putative rRNA 2'-O-methyltransferase fibrillarin 3... [more]
FBRL_TETTH3.444e-8971.95rRNA 2'-O-methyltransferase fibrillarin OS=Tetrahy... [more]
FBRL_CANGA3.444e-8971.68rRNA 2'-O-methyltransferase fibrillarin OS=Candida... [more]
FBRL_YEAST4.498e-8971.68rRNA 2'-O-methyltransferase fibrillarin OS=Sacchar... [more]
FBRL_ASHGO2.233e-8870.80rRNA 2'-O-methyltransferase fibrillarin OS=Ashbya ... [more]
FBRL_DEBHA2.468e-8769.47rRNA 2'-O-methyltransferase fibrillarin OS=Debaryo... [more]
FBRL_NEUCR4.357e-8470.85rRNA 2'-O-methyltransferase fibrillarin OS=Neurosp... [more]
FBRL_DICDI4.078e-8267.12rRNA 2'-O-methyltransferase fibrillarin OS=Dictyos... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003O21_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003O21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187093 ID=CN187093; Name=CN187093; organism=Citrus sinensis; type=EST; length=818bp
TTTTTTTCAACAAACATAACAAGGTCAGATAGCACAAAATTGTTCATTCA
TCCCTTTTAGCTATTACAAAATCAACAACTCCAGCATTAATGTCTGGATA
CAACAAAATGGTGGATGTCCGATGATGGTCTAAGCCTTCTGTTTCTTCGG
CATACGGTAGCCACCAACAACACAGGCGTGGTCTCGCTCAAAGGGCTCGA
GTGTCACTTGCTCAAAGGGTTTGAACTGCTCCTGTTGCAGCTTCTTAACT
TCACTCTGGAACACTGCCTCAGCAGGAACAGTGGAATCTATGCAGTTTGC
CTTGATAGAAATAACAAAATGACCTCCAGCTTTGAGAAAATATGATGCAT
TCAGGGCTAAAATCCTCGCCTGATCCGGTTGGGCAACGTCAGAAAATATT
ACATCTACCATACCGACCAACATACGGTACTTGGCAGGATGTCTAGCATC
TTCAATTATGGGTATAACATTAGTTCTCTTCTTTGCCATATTGACCAAGT
CTCTACCACTTCTATGAGAAAATTCCACTGCATAAACTACTCCATTAGGG
CCAACAATGTCAGAAACATGAGAGACAGTTGTGCCGGAAGCAGCACCAAG
GTATAGAACCCTAGCACCAGGTTTAATCCAAATATTATCAACACCACCAA
GAACAGCTGCAGCTAATTTGGAACGGAAGGGATTCCAAATTCTATACTCA
ACTTTGGTTCCATCTTCATTCTGGACGGAGATCCTCTTCTCATTGTATAC
AGCCTCACCCGCGACGAGATTCTTAGTGACAAGGGCGTCTTCTTTGCCCT
TGGCAATGAACACTCCTT
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