CX675252

Overview
NameCX675252
Unique NameCX675252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: CDK20_HUMAN (Cell division protein kinase 20 OS=Homo sapiens GN=CDK20 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.460e-18
Identity = 62/172 (36.05%), Postives = 96/172 (55.81%), Query Frame = 1
Query:  283 IFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKR--NQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILR-MQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATF-VGTVTYMSPE 786
            I G IG GA  +V +A H+ T  I+ALKK+ +   E    NQ L EI+ L E   N+ +V+    F  P  G   +A E+M    LA+++R  Q+ + +  + S  + LL+G+++ H   ++VHRD+KPANLL++  G+ KI DFG++       +   T  V T  Y +PE
Sbjct:    6 ILGRIGEGAHGIVFKAKHVETGEIVALKKVALRRLEDGFPNQALREIKALQEMEDNQYVVQLKAVF--PHGGGFVLAFEFMLS-DLAEVVRHAQRPLAQAQVKSYLQMLLKGVAFCHA-NNIVHRDLKPANLLISASGQLKIADFGLARVFSPDGSRLYTHQVATRWYRAPE 173          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: STE20_KLULA (Serine/threonine-protein kinase STE20 OS=Kluyveromyces lactis GN=STE20 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.132e-18
Identity = 54/171 (31.58%), Postives = 98/171 (57.31%), Query Frame = 1
Query:  295 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNESY 807
            IG GAS  V  A  + T+  +A+K++N+ ++ K+  ++ EI  +  +  N  +V F  ++     G + + +EYM+GGSL D++     + E  + ++ ++ L+GL +LH  + ++HRDIK  N+L+++ G  K+TDFG  A +        T VGT  +M+PE +  + Y
Sbjct:  704 IGQGASGGVYTAYELGTNASVAIKQMNLEKQPKKELIVNEILVMKGSKHNN-IVNFIDSYLF--RGDLWVVMEYMEGGSLTDVVT-HCILTEGQIGAVSRETLKGLQFLHS-KGVIHRDIKSDNILLSMNGDIKLTDFGFCAQINEVNLKRTTMVGTPYWMAPEVVSRKEY 869          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: MST4_MOUSE (Serine/threonine-protein kinase MST4 OS=Mus musculus GN=Mst4 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.132e-18
Identity = 60/176 (34.09%), Postives = 99/176 (56.25%), Query Frame = 1
Query:  295 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKR-NQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNESYSYPA 819
            IG G+   V + +   T +++A+K I++ E E     +  EI  L +  C+   V  +   Y+  S ++ I +EY+ GGS  D+LR      E  +++M K++L+GL YLH  +  +HRDIK AN+L++  G  K+ DFG++  L ++     TFVGT  +M+PE I+  +Y   A
Sbjct:   30 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQ--CDSSYVTKYYGSYLKGS-KLWIIMEYLGGGSALDLLRAGP-FDEFQIATMLKEILKGLDYLHSEKK-IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKA 200          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: MST4_HUMAN (Serine/threonine-protein kinase MST4 OS=Homo sapiens GN=MST4 PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 7.132e-18
Identity = 60/176 (34.09%), Postives = 99/176 (56.25%), Query Frame = 1
Query:  295 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKR-NQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNESYSYPA 819
            IG G+   V + +   T +++A+K I++ E E     +  EI  L +  C+   V  +   Y+  S ++ I +EY+ GGS  D+LR      E  +++M K++L+GL YLH  +  +HRDIK AN+L++  G  K+ DFG++  L ++     TFVGT  +M+PE I+  +Y   A
Sbjct:   30 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQ--CDSSYVTKYYGSYLKGS-KLWIIMEYLGGGSALDLLRAGP-FDEFQIATMLKEILKGLDYLHSEKK-IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKA 200          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: CLA4_CANAL (Serine/threonine-protein kinase CLA4 OS=Candida albicans GN=CLA4 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.132e-18
Identity = 58/178 (32.58%), Postives = 105/178 (58.99%), Query Frame = 1
Query:  280 RIFGAIGSGASSVVQRAVHIP-THRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNESY 807
            RI    G GAS  V  A  I   +R IA+K++++  + ++  ++ EI  + ++  ++ +V F  ++ + D+ ++ + +EYM GGSL +I+      + E  ++++  + L+GL +LH  +H++HRDIK  N+L++  G  KITDFG  A L +     AT VGT  +M+PE ++ + Y
Sbjct:  681 RIVEKAGQGASGNVYLAEMIKDNNRKIAIKQMDLDAQPRKELIINEILVMKDSQ-HKNIVNFLDSYLIGDN-ELWVIMEYMQGGSLTEIIENNDFKLNEKQIATICFETLKGLQHLHK-KHIIHRDIKSDNVLLDAYGNVKITDFGFCAKLTDQRNKRATMVGTPYWMAPEVVKQKEY 855          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: SVKA_DICDI (Serine/threonine-protein kinase svkA OS=Dictyostelium discoideum GN=svkA PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.314e-18
Identity = 59/178 (33.15%), Postives = 99/178 (55.62%), Query Frame = 1
Query:  295 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKR-NQLLTEIRTL--CEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNESYSYPA 819
            IG G+   V + ++  T+  IA+K I++ + E     +  EI  L  CE+P    + ++ G+F      ++ I +EY+ GGS+ D+++      E  ++ + ++LL+GL YLH     +HRDIK AN+L++  G  K+ DFG+S  L + +    TFVGT  +M+PE I+   Y   A
Sbjct:   18 IGKGSFGEVFKGINKKTNETIAIKTIDLEDAEDEIEDIQQEINVLSQCESPF---VTKYFGSFLK--GSKLWIIMEYLAGGSVLDLMK-PGPFDEGYIAIILRELLKGLEYLHS-EGKIHRDIKAANVLLSASGDVKLADFGVSGQLTDQMTKRNTFVGTPFWMAPEVIKQTGYDSKA 188          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: STK24_HUMAN (Serine/threonine-protein kinase 24 OS=Homo sapiens GN=STK24 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.314e-18
Identity = 57/176 (32.39%), Postives = 100/176 (56.82%), Query Frame = 1
Query:  295 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKR-NQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNESYSYPA 819
            IG G+   V + +   T +++A+K I++ E E     +  EI  L +  C+   V  +   Y+ D+ ++ I +EY+ GGS  D+L     + E  ++++ +++L+GL YLH  +  +HRDIK AN+L++  G  K+ DFG++  L ++     TFVGT  +M+PE I+  +Y   A
Sbjct:   42 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQ--CDSPYVTKYYGSYLKDT-KLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSEKK-IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKA 212          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: STK10_MOUSE (Serine/threonine-protein kinase 10 OS=Mus musculus GN=Stk10 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.314e-18
Identity = 58/187 (31.02%), Postives = 104/187 (55.61%), Query Frame = 1
Query:  283 IFGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTL--CEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSL-ADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSP-----ERIRNESYSYPA 819
            I G +G GA   V +A +  T  + A K I    +E+    + EI  L  C+ P    +V+  GA+Y    G++ I +E+  GG++ A +L + + + EP +  + +++L+ L++LHG R ++HRD+K  N+L+ L G  ++ DFG+SA    ++    +F+GT  +M+P     E +++  Y Y A
Sbjct:   38 IVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPY---IVKLLGAYYY--DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHGKR-IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVLCETMKDAPYDYKA 218          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: STE20_YEAST (Serine/threonine-protein kinase STE20 OS=Saccharomyces cerevisiae GN=STE20 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.314e-18
Identity = 54/171 (31.58%), Postives = 98/171 (57.31%), Query Frame = 1
Query:  295 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNESY 807
            IG GAS  V  A  I T+  +A+K++N+ ++ K+  ++ EI  + +   +  +V F  ++ +   G + + +EYM+GGSL D++     + E  + ++ ++ L GL +LH  + ++HRDIK  N+L+++ G  K+TDFG  A +        T VGT  +M+PE +  + Y
Sbjct:  626 IGQGASGGVYTAYEIGTNVSVAIKQMNLEKQPKKELIINEILVM-KGSKHPNIVNFIDSYVL--KGDLWVIMEYMEGGSLTDVVT-HCILTEGQIGAVCRETLSGLEFLHS-KGVLHRDIKSDNILLSMEGDIKLTDFGFCAQINELNLKRTTMVGTPYWMAPEVVSRKEY 791          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: STE20_DEBHA (Serine/threonine-protein kinase STE20 OS=Debaryomyces hansenii GN=STE20 PE=3 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 9.314e-18
Identity = 57/173 (32.95%), Postives = 100/173 (57.80%), Query Frame = 1
Query:  295 IGSGASSVVQRAVHIPTHR--IIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNESY 807
            IG GAS  V  A H   HR   +A+K++N+ ++ K+  ++ EI  + +   +E +V F  ++ +   G + + +EYM+GGSL +I+     + E  + ++ ++ L+GL +LH  + ++HRDIK  N+L+N+ G  K+TDFG  A +        T VGT  +M+PE +  + Y
Sbjct:  807 IGQGASGGVYIA-HDVNHRSQTVAIKQMNLEQQPKKELIINEILVM-KGSKHENIVNFIDSYLL--RGDLWVVMEYMEGGSLTEIVT-HSVMTEGQIGAVCRETLKGLRFLHS-KGVIHRDIKSDNILLNIDGNIKMTDFGFCAQINEINLKRTTMVGTPYWMAPEVVSRKEY 973          
The following BLAST results are available for this feature:
BLAST of CX675252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDK20_HUMAN5.460e-1836.05Cell division protein kinase 20 OS=Homo sapiens GN... [more]
STE20_KLULA7.132e-1831.58Serine/threonine-protein kinase STE20 OS=Kluyverom... [more]
MST4_MOUSE7.132e-1834.09Serine/threonine-protein kinase MST4 OS=Mus muscul... [more]
MST4_HUMAN7.132e-1834.09Serine/threonine-protein kinase MST4 OS=Homo sapie... [more]
CLA4_CANAL7.132e-1832.58Serine/threonine-protein kinase CLA4 OS=Candida al... [more]
SVKA_DICDI9.314e-1833.15Serine/threonine-protein kinase svkA OS=Dictyostel... [more]
STK24_HUMAN9.314e-1832.39Serine/threonine-protein kinase 24 OS=Homo sapiens... [more]
STK10_MOUSE9.314e-1831.02Serine/threonine-protein kinase 10 OS=Mus musculus... [more]
STE20_YEAST9.314e-1831.58Serine/threonine-protein kinase STE20 OS=Saccharom... [more]
STE20_DEBHA9.314e-1832.95Serine/threonine-protein kinase STE20 OS=Debaryomy... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_60H05_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-60H05-O10-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675252 ID=CX675252; Name=CX675252; organism=Citrus sinensis; type=EST; length=819bp
CAACAGCGAAAAAGTTCACCTTAAATTATCATGGCCGGGCTGGAGGAATT
AAAAAAGAAGCTTGCACCATTGTTTGATGCTGAAAAAGGTTTTTCTGCTG
GATCAACTCTTGACCCTTCGGATTCGTATATGCTGTCAGATGGTGGAACT
GTTAATTTATTAAGTAGATCATATGGAGTGTACAACTTTAATGAGCTCGG
ATTGCAAAAATGCACATCTTGGCTTGCTGATGAATCGGATCACAGCGAAA
AAACTTATCGATGTGCTTCTCATGAGATGAGGATTTTTGGAGCCATAGGT
AGTGGAGCAAGCAGCGTTGTTCAGAGAGCTGTCCACATTCCCACTCATAG
AATTATTGCCTTGAAGAAGATTAATATTTTTGAAAAGGAGAAAAGAAATC
AGCTTCTTACTGAGATAAGGACATTGTGCGAGGCTCCTTGTAACGAGGGT
CTTGTGGAGTTCCATGGTGCATTTTATATGCCAGACTCGGGGCAAATAAG
CATAGCTTTGGAGTACATGGATGGTGGATCTTTGGCGGATATCTTACGAA
TGCAAAAAAGTATACCAGAACCAATTCTTTCATCAATGTTTAAAAAGCTT
CTACAGGGATTAAGTTACTTACATGGAGTCAGACATTTAGTTCATAGAGA
CATTAAGCCAGCAAATCTTCTTGTAAATCTCANAGGGCGGCCGAAAATTA
CAGATTTTGGTATAAGTGCTGGCCTGNAGAATTCAATAGCAATGTGTGCT
ACTTTTGTCGGAACTGTTACATACATGTCACCTGAAAGAATTCGAAATGA
GAGCTACTCTTATCCTGCT
back to top