CX675252

Overview
NameCX675252
Unique NameCX675252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: PAK3_PONPY (Serine/threonine-protein kinase PAK 3 OS=Pongo pygmaeus GN=PAK3 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.951e-20
Identity = 55/174 (31.61%), Postives = 103/174 (59.20%), Query Frame = 1
Query:  286 FGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNESY 807
            F  IG GAS  V  A+ I T + +A+K++N+ ++ K+  ++ EI  + E   N  +V +  ++ + D  ++ + +EY+ GGSL D++  +  + E  ++++ ++ LQ L +LH    ++HRDIK  N+L+ + G  K+TDFG  A +    +  +T VGT  +M+PE +  ++Y
Sbjct:  286 FEKIGQGASGTVYTALDIATGQEVAIKQMNLQQQPKKELIINEILVMRENK-NPNIVNYLDSYLVGD--ELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALDFLHS-NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY 454          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: PAK3_PANTR (Serine/threonine-protein kinase PAK 3 OS=Pan troglodytes GN=PAK3 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.951e-20
Identity = 55/174 (31.61%), Postives = 103/174 (59.20%), Query Frame = 1
Query:  286 FGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNESY 807
            F  IG GAS  V  A+ I T + +A+K++N+ ++ K+  ++ EI  + E   N  +V +  ++ + D  ++ + +EY+ GGSL D++  +  + E  ++++ ++ LQ L +LH    ++HRDIK  N+L+ + G  K+TDFG  A +    +  +T VGT  +M+PE +  ++Y
Sbjct:  286 FEKIGQGASGTVYTALDIATGQEVAIKQMNLQQQPKKELIINEILVMRENK-NPNIVNYLDSYLVGD--ELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALDFLHS-NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY 454          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: PAK3_MOUSE (Serine/threonine-protein kinase PAK 3 OS=Mus musculus GN=Pak3 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 9.951e-20
Identity = 55/174 (31.61%), Postives = 103/174 (59.20%), Query Frame = 1
Query:  286 FGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNESY 807
            F  IG GAS  V  A+ I T + +A+K++N+ ++ K+  ++ EI  + E   N  +V +  ++ + D  ++ + +EY+ GGSL D++  +  + E  ++++ ++ LQ L +LH    ++HRDIK  N+L+ + G  K+TDFG  A +    +  +T VGT  +M+PE +  ++Y
Sbjct:  286 FEKIGQGASGTVYTALDIATGQEVAIKQMNLQQQPKKELIINEILVMRENK-NPNIVNYLDSYLVGD--ELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALDFLHS-NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY 454          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: PAK3_HUMAN (Serine/threonine-protein kinase PAK 3 OS=Homo sapiens GN=PAK3 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 9.951e-20
Identity = 55/174 (31.61%), Postives = 103/174 (59.20%), Query Frame = 1
Query:  286 FGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNESY 807
            F  IG GAS  V  A+ I T + +A+K++N+ ++ K+  ++ EI  + E   N  +V +  ++ + D  ++ + +EY+ GGSL D++  +  + E  ++++ ++ LQ L +LH    ++HRDIK  N+L+ + G  K+TDFG  A +    +  +T VGT  +M+PE +  ++Y
Sbjct:  286 FEKIGQGASGTVYTALDIATGQEVAIKQMNLQQQPKKELIINEILVMRENK-NPNIVNYLDSYLVGD--ELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALDFLHS-NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY 454          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: HIPPO_DROME (Serine/threonine-protein kinase hippo OS=Drosophila melanogaster GN=hpo PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.951e-20
Identity = 57/174 (32.76%), Postives = 105/174 (60.34%), Query Frame = 1
Query:  295 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTL--CEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNESY 807
            +G G+   V +AVH  +  I+A+K + +  +   ++++ EI  +  C++P    +V ++G+++      + I +EY   GS++DI+R++K ++ E  ++++    LQGL YLH +R  +HRDIK AN+L+N  G  K+ DFG++  L +++A   T +GT  +M+PE I    Y
Sbjct:   48 LGEGSYGSVYKAVHKESSSIVAIKLVPV--ESDLHEIIKEISIMQQCDSPY---VVRYYGSYFK--QYDLWICMEYCGAGSVSDIMRLRKKTLTEDEIATILSDTLQGLVYLH-LRRKIHRDIKAANILLNTEGYAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGY 213          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: STK4_XENLA (Serine/threonine-protein kinase 4 OS=Xenopus laevis GN=stk4 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.300e-19
Identity = 55/175 (31.43%), Postives = 110/175 (62.86%), Query Frame = 1
Query:  295 IGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTL--CEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQK-SIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNESYS 810
            +G G+   V +A H  T +I+A+K+I +  +    +++ EI  +  C++P    +V+++G+++   +  + I +E+  GGS++DI+R++K ++ E  ++++ +  L+GL YLH +R  +HRDIK  N+L++  G  K+ DFG++  L +++A   T +GT  +M+PE I+   Y+
Sbjct:   36 LGEGSYGSVYKASHKETSQIVAIKQIPV--ESDLQEIIKEISIMQQCDSP---HVVKYYGSYFK--NTDLWIVMEFCGGGSVSDIIRLRKQTLNEDEIATILQSTLKGLEYLHFMRK-IHRDIKAGNILLSCEGTAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYN 202          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: PAK1_RAT (Serine/threonine-protein kinase PAK 1 OS=Rattus norvegicus GN=Pak1 PE=1 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 1.300e-19
Identity = 54/174 (31.03%), Postives = 103/174 (59.20%), Query Frame = 1
Query:  286 FGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNESY 807
            F  IG GAS  V  A+ + T + +A+K++N+ ++ K+  ++ EI  + E   N  +V +  ++ + D  ++ + +EY+ GGSL D++  +  + E  ++++ ++ LQ L +LH    ++HRDIK  N+L+ + G  K+TDFG  A +    +  +T VGT  +M+PE +  ++Y
Sbjct:  272 FEKIGQGASGTVYTAMDVATGQEVAIKQMNLQQQPKKELIINEILVMRENK-NPNIVNYLDSYLVGD--ELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALEFLHS-NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY 440          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: PAK1_MOUSE (Serine/threonine-protein kinase PAK 1 OS=Mus musculus GN=Pak1 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.300e-19
Identity = 54/174 (31.03%), Postives = 103/174 (59.20%), Query Frame = 1
Query:  286 FGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNESY 807
            F  IG GAS  V  A+ + T + +A+K++N+ ++ K+  ++ EI  + E   N  +V +  ++ + D  ++ + +EY+ GGSL D++  +  + E  ++++ ++ LQ L +LH    ++HRDIK  N+L+ + G  K+TDFG  A +    +  +T VGT  +M+PE +  ++Y
Sbjct:  273 FEKIGQGASGTVYTAMDVATGQEVAIKQMNLQQQPKKELIINEILVMRENK-NPNIVNYLDSYLVGD--ELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALEFLHS-NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY 441          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: PAK1_HUMAN (Serine/threonine-protein kinase PAK 1 OS=Homo sapiens GN=PAK1 PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.300e-19
Identity = 54/174 (31.03%), Postives = 103/174 (59.20%), Query Frame = 1
Query:  286 FGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNESY 807
            F  IG GAS  V  A+ + T + +A+K++N+ ++ K+  ++ EI  + E   N  +V +  ++ + D  ++ + +EY+ GGSL D++  +  + E  ++++ ++ LQ L +LH    ++HRDIK  N+L+ + G  K+TDFG  A +    +  +T VGT  +M+PE +  ++Y
Sbjct:  273 FEKIGQGASGTVYTAMDVATGQEVAIKQMNLQQQPKKELIINEILVMRENK-NPNIVNYLDSYLVGD--ELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALEFLHS-NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY 441          
BLAST of CX675252 vs. ExPASy Swiss-Prot
Match: PAK1_BOVIN (Serine/threonine-protein kinase PAK 1 OS=Bos taurus GN=PAK1 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.300e-19
Identity = 54/174 (31.03%), Postives = 103/174 (59.20%), Query Frame = 1
Query:  286 FGAIGSGASSVVQRAVHIPTHRIIALKKINIFEKEKRNQLLTEIRTLCEAPCNEGLVEFHGAFYMPDSGQISIALEYMDGGSLADILRMQKSIPEPILSSMFKKLLQGLSYLHGVRHLVHRDIKPANLLVNLXGRPKITDFGISAGLXNSIAMCATFVGTVTYMSPERIRNESY 807
            F  IG GAS  V  A+ + T + +A+K++N+ ++ K+  ++ EI  + E   N  +V +  ++ + D  ++ + +EY+ GGSL D++  +  + E  ++++ ++ LQ L +LH    ++HRDIK  N+L+ + G  K+TDFG  A +    +  +T VGT  +M+PE +  ++Y
Sbjct:  272 FEKIGQGASGTVYTAMDVATGQEVAIKQMNLQQQPKKELIINEILVMRENK-NPNIVNYLDSYLVGD--ELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALEFLHS-NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY 440          
The following BLAST results are available for this feature:
BLAST of CX675252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PAK3_PONPY9.951e-2031.61Serine/threonine-protein kinase PAK 3 OS=Pongo pyg... [more]
PAK3_PANTR9.951e-2031.61Serine/threonine-protein kinase PAK 3 OS=Pan trogl... [more]
PAK3_MOUSE9.951e-2031.61Serine/threonine-protein kinase PAK 3 OS=Mus muscu... [more]
PAK3_HUMAN9.951e-2031.61Serine/threonine-protein kinase PAK 3 OS=Homo sapi... [more]
HIPPO_DROME9.951e-2032.76Serine/threonine-protein kinase hippo OS=Drosophil... [more]
STK4_XENLA1.300e-1931.43Serine/threonine-protein kinase 4 OS=Xenopus laevi... [more]
PAK1_RAT1.300e-1931.03Serine/threonine-protein kinase PAK 1 OS=Rattus no... [more]
PAK1_MOUSE1.300e-1931.03Serine/threonine-protein kinase PAK 1 OS=Mus muscu... [more]
PAK1_HUMAN1.300e-1931.03Serine/threonine-protein kinase PAK 1 OS=Homo sapi... [more]
PAK1_BOVIN1.300e-1931.03Serine/threonine-protein kinase PAK 1 OS=Bos tauru... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_60H05_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-60H05-O10-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675252 ID=CX675252; Name=CX675252; organism=Citrus sinensis; type=EST; length=819bp
CAACAGCGAAAAAGTTCACCTTAAATTATCATGGCCGGGCTGGAGGAATT
AAAAAAGAAGCTTGCACCATTGTTTGATGCTGAAAAAGGTTTTTCTGCTG
GATCAACTCTTGACCCTTCGGATTCGTATATGCTGTCAGATGGTGGAACT
GTTAATTTATTAAGTAGATCATATGGAGTGTACAACTTTAATGAGCTCGG
ATTGCAAAAATGCACATCTTGGCTTGCTGATGAATCGGATCACAGCGAAA
AAACTTATCGATGTGCTTCTCATGAGATGAGGATTTTTGGAGCCATAGGT
AGTGGAGCAAGCAGCGTTGTTCAGAGAGCTGTCCACATTCCCACTCATAG
AATTATTGCCTTGAAGAAGATTAATATTTTTGAAAAGGAGAAAAGAAATC
AGCTTCTTACTGAGATAAGGACATTGTGCGAGGCTCCTTGTAACGAGGGT
CTTGTGGAGTTCCATGGTGCATTTTATATGCCAGACTCGGGGCAAATAAG
CATAGCTTTGGAGTACATGGATGGTGGATCTTTGGCGGATATCTTACGAA
TGCAAAAAAGTATACCAGAACCAATTCTTTCATCAATGTTTAAAAAGCTT
CTACAGGGATTAAGTTACTTACATGGAGTCAGACATTTAGTTCATAGAGA
CATTAAGCCAGCAAATCTTCTTGTAAATCTCANAGGGCGGCCGAAAATTA
CAGATTTTGGTATAAGTGCTGGCCTGNAGAATTCAATAGCAATGTGTGCT
ACTTTTGTCGGAACTGTTACATACATGTCACCTGAAAGAATTCGAAATGA
GAGCTACTCTTATCCTGCT
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