EY665853

Overview
NameEY665853
Unique NameEY665853
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length856
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665853 vs. ExPASy Swiss-Prot
Match: HAOX2_RAT (Hydroxyacid oxidase 2 OS=Rattus norvegicus GN=Hao2 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.172e-16
Identity = 53/157 (33.76%), Postives = 85/157 (54.14%), Query Frame = 3
Query:  195 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVERRLLSRDLASAFFTSIVYKDKNVVAQLVKRAEKTGIQGPLLLKLIPPSLG 665
            +++A A+++L K  +D+    A+D  T  EN  AF RI  RPR L D+SK+D  TT+ G +IS PI I+PTA   +A P+GE               +SS+++ S+E  + +      +F   +  D +   Q+V+RAE  G +  L++ +  P LG
Sbjct:    8 DFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTTIQGQEISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKA-LVITIDTPVLG 163          
BLAST of EY665853 vs. ExPASy Swiss-Prot
Match: MDLB_PSEPU ((S)-mandelate dehydrogenase OS=Pseudomonas putida GN=mdlB PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.411e-16
Identity = 46/145 (31.72%), Postives = 78/145 (53.79%), Query Frame = 3
Query:  186 NVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVERRLLSRDLASAFFTSIVYKDKNVVAQLVKRAEKTG 620
            NV +Y  + +++LPKMV+DY   GAED++ ++ NR+ F +  F+P+ L+DVS+  +   VLG + SMP++I PT +     P+G+          G    LS+ S  S+E   L+R      +  +    + +   +V +A  TG
Sbjct:    7 NVEDYRKLRQKRLPKMVYDYLEGGAEDEYGVKHNRDVFQQWRFKPKRLVDVSRRSLQAEVLGKRQSMPLLIGPTGLNGALWPKGDLALARAATKAGIPFVLSTASNMSIED--LARQCDGDLWFQLYVIHREIAQGMVLKALHTG 149          
BLAST of EY665853 vs. ExPASy Swiss-Prot
Match: LLDD2_MYCTU (Putative L-lactate dehydrogenase [cytochrome] 2 OS=Mycobacterium tuberculosis GN=lldD2 PE=3 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 5.983e-15
Identity = 50/177 (28.25%), Postives = 83/177 (46.89%), Query Frame = 3
Query:  132 P*INLSRKQ---STDKMGEITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVERRLLSRDLASAFFTSIVYKDKNVVAQLVKRAEKTGIQGPLLLKLIP 653
            P +  +R Q   S  ++G    + +   IAK + P+  FDY   GAED+ ++   R  F  I F P IL DV+ +     VLG    +P  IAPT   ++ H EGE          G   +LS+ +T ++E  +++      +F   +++D++    LV+R    G    L+   +P
Sbjct:   15 PLLQFNRPQFDTSKRRLGAALTIQDLRRIAKRRTPRAAFDYADGGAEDELSIARARQGFRDIEFHPTILRDVTTVCAGWNVLGQPTVLPFGIAPTGFTRLMHTEGEIAGARAAAAAGIPFSLSTLATCAIEDLVIAVPQGRKWFQLYMWRDRDRSMALVRRVAAAGFDTMLVTVDVP 191          
BLAST of EY665853 vs. ExPASy Swiss-Prot
Match: HAOX2_MOUSE (Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.814e-15
Identity = 52/157 (33.12%), Postives = 84/157 (53.50%), Query Frame = 3
Query:  195 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVERRLLSRDLASAFFTSIVYKDKNVVAQLVKRAEKTGIQGPLLLKLIPPSLG 665
            +++A A+++L K  +D+    A+D  T  +N  AF RI  RPR L DVSKID  TT+ G +I+ PI I+PTA   +A  +GE               +SS+++ +VE  + +      +F   V  D ++  Q+V+R E  G +  L++ +  P LG
Sbjct:    8 DFKAQAQKQLSKTSWDFIEGEADDGITYNDNLAAFRRIRLRPRYLRDVSKIDTRTTIQGQEINAPICISPTAFHSIAWADGEKSTAKAAQKANICYVISSYASYTVEDIVAAAPGGLHWFQLYVQPDWDINKQMVQRIEALGFKA-LVVTVDAPVLG 163          
BLAST of EY665853 vs. ExPASy Swiss-Prot
Match: LLDD_PSEFS (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas fluorescens (strain SBW25) GN=lldD PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 5.065e-14
Identity = 43/148 (29.05%), Postives = 76/148 (51.35%), Query Frame = 3
Query:  180 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVERRLLSRDLASAFFTSIVYKDKNVVAQLVKRAEKTGI 623
            I++  +Y A A+ KLP+ +FDY   GA  + T++ N +  + I  R RIL +V  + + TTV G ++ MP++++P  +  M    GE          G    LS+ S   +E  + S+   + +F   V KD+  +   ++RA+  G+
Sbjct:    3 ISSASDYRAAAQRKLPRFLFDYIDGGAYAEHTMRANSSDLAEISLRQRILRNVDNLSLKTTVFGQELDMPVILSPVGLTGMYARRGEVQAAKAAANKGVPFCLSTVSVCPIE-EVASQSARAIWFQLYVLKDRGFMRNALERAQAAGV 149          
BLAST of EY665853 vs. ExPASy Swiss-Prot
Match: LLDD1_MYCTU (Putative L-lactate dehydrogenase [cytochrome] 1 OS=Mycobacterium tuberculosis GN=lldD1 PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.283e-13
Identity = 44/140 (31.43%), Postives = 77/140 (55.00%), Query Frame = 3
Query:  210 AKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVERRLLSRDLASAFFTSIVYKDKNVVAQLVKRAEKTGIQG 629
            AK +LPK V+    + +E   T+ +N  AFS + F P ++    K D++TTV+G ++S+P++I+PT +Q +  P GE          GT+M LSS+++  +E  + +      FF       ++ +A+ V+RA + G  G
Sbjct:   16 AKRRLPKSVYSSLIAASEKGITVADNVAAFSELGFAPHVIGATDKRDLSTTVMGQEVSLPVIISPTGVQAV-DPGGEVAVARAAAARGTVMGLSSFASKPIEEVIAAN--PKTFFQVYWQGGRDALAERVERARQAGAVG 152          
BLAST of EY665853 vs. ExPASy Swiss-Prot
Match: LLDD_AZOC5 (L-lactate dehydrogenase [cytochrome] OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=lldD PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.314e-13
Identity = 44/148 (29.73%), Postives = 74/148 (50.00%), Query Frame = 3
Query:  180 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVERRLLSRDLASAFFTSIVYKDKNVVAQLVKRAEKTGI 623
            I++  +Y A AK +LP  +F Y   GA  ++TL+ N    S I  R ++L +V+ + + T + G K++MP+ +AP  +  M    GE          G   TLS+ S   +E  + S+     +F   V KD+  +   ++RA+  GI
Sbjct:    3 ISSPNDYRAAAKSRLPPFLFHYVDGGAYAEYTLRRNVEDLSHIALRQQVLRNVADLSLETELFGQKLTMPVALAPVGLTGMLARRGEVQAAKAAQAKGVPFTLSTVSVCPIE-EVQSQCAKPIWFQLYVLKDRGFMRNALERAQAAGI 149          
BLAST of EY665853 vs. ExPASy Swiss-Prot
Match: LLDD_PSEU2 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas syringae pv. syringae (strain B728a) GN=lldD PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.248e-12
Identity = 43/148 (29.05%), Postives = 75/148 (50.68%), Query Frame = 3
Query:  180 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVERRLLSRDLASAFFTSIVYKDKNVVAQLVKRAEKTGI 623
            I++  +Y A AK KLP+ +FDY   GA  + TL+ N +  + I  R R+L +V  + + T + G  ++MPI+++P  +  M    GE               LS+ S  S+E  + S+   + +F   V KD+  +   ++RA+  G+
Sbjct:    3 ISSASDYRAAAKRKLPRFLFDYIDGGAYAEHTLRANGSDLADISLRQRVLKNVDNVSLETRLFGESLAMPIILSPVGLSGMYARRGEVQVARAAANKRIPFCLSTVSVCSIE-EVASQSDQAIWFQLYVLKDRGFMKNALERAKAAGV 149          
BLAST of EY665853 vs. ExPASy Swiss-Prot
Match: LLDD_VIBPA (L-lactate dehydrogenase [cytochrome] OS=Vibrio parahaemolyticus GN=lldD PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.630e-12
Identity = 41/143 (28.67%), Postives = 71/143 (49.65%), Query Frame = 3
Query:  195 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVERRLLSRDLASAFFTSIVYKDKNVVAQLVKRAEKTGI 623
            +Y A AK KLP  +F Y   G+ D+ TL+ N +    +  R R+L D++ + + T + G K++MPI +AP  +  M    GE          G   T+S+ S   +E    + +    +F   V KD+  +  +++RA+  G+
Sbjct:    8 DYRAAAKAKLPPFLFHYIDGGSYDERTLKRNTDDLGDVALRQRVLRDMTDLSLETEIFGEKLAMPIALAPVGLTGMYARRGEVQAAKAAEKKGIPFTMSTVSVCPIEEVAPAIE-RPMWFQLYVLKDRGFMKNVLERAKAAGV 149          
BLAST of EY665853 vs. ExPASy Swiss-Prot
Match: LLDD_XANP2 (L-lactate dehydrogenase [cytochrome] OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=lldD PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.086e-12
Identity = 45/149 (30.20%), Postives = 75/149 (50.34%), Query Frame = 3
Query:  180 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVERRLLSRDLASAFFTSIVYKDKNVVAQLVKRAEKTGIQ 626
            I++  +Y   A+ +LP  +F Y   GA  + TL+ N    S +  R R+L  V ++D++TT+L  ++SMP+ +AP  +  M    GE          G   TLS+ S  S+E  + S+     +F   V KD+  +   ++RA   GI+
Sbjct:    3 ISSSSDYREAARRRLPPFLFHYIDGGAYAEATLRRNVEDLSDLALRQRVLKSVGEVDLSTTLLKQQLSMPVGLAPVGLTGMYARRGEVQAAQAATQKGIPFTLSTVSVCSIE-EVQSQVGKPIWFQLYVLKDRGFMKNALERAWAAGIR 150          
The following BLAST results are available for this feature:
BLAST of EY665853 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
HAOX2_RAT3.172e-1633.76Hydroxyacid oxidase 2 OS=Rattus norvegicus GN=Hao2... [more]
MDLB_PSEPU5.411e-1631.72(S)-mandelate dehydrogenase OS=Pseudomonas putida ... [more]
LLDD2_MYCTU5.983e-1528.25Putative L-lactate dehydrogenase [cytochrome] 2 OS... [more]
HAOX2_MOUSE7.814e-1533.12Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2... [more]
LLDD_PSEFS5.065e-1429.05L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD1_MYCTU3.283e-1331.43Putative L-lactate dehydrogenase [cytochrome] 1 OS... [more]
LLDD_AZOC57.314e-1329.73L-lactate dehydrogenase [cytochrome] OS=Azorhizobi... [more]
LLDD_PSEU21.248e-1229.05L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_VIBPA3.630e-1228.67L-lactate dehydrogenase [cytochrome] OS=Vibrio par... [more]
LLDD_XANP28.086e-1230.20L-lactate dehydrogenase [cytochrome] OS=Xanthobact... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-006-D02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665853 ID=EY665853; Name=EY665853; organism=Citrus sinensis; type=EST; length=856bp
CCCACGCGTCCGATTTTATTTTCTCTTTGCTTTCTATTTCTTAAATCTCC
CTCTATAACTCAGTCTTTGTTCATCATCGTCTTCTCTCTACTGGTTTCTC
TGAATGCACTTTGCTGCACTGTCTTTGTAAACCTTAGATTAATTTAAGTA
GAAAACAGTCAACTGACAAGATGGGAGAGATCACAAATGTGATGGAGTAT
GAGGCCATTGCCAAGGAAAAGTTGCCAAAGATGGTGTTTGATTACTATGC
TTCAGGTGCAGAGGACCAGTGGACTTTGCAAGAGAACAGGAATGCTTTCT
CAAGAATCCTGTTTCGACCTCGCATTCTGATTGATGTAAGCAAAATAGAC
ATGAATACCACTGTCTTGGGCTTCAAGATATCGATGCCAATCATGATTGC
CCCAACAGCCATGCAGAAGATGGCTCATCCTGAAGGGGAGTATGCTACAG
CTAGAGCTGCATCGGCTGCTGGAACGATTATGACATTGTCTTCGTGGTCT
ACTTCTAGCGTTGAAAGAAGGTTGCTTTCACGGGACCTGGCATCCGCTTT
TTTCACCTCTATTGTGTACAAGGACAAGAATGTGGTTGCTCAGCTTGTGA
AAAGGGCTGAAAAAACCGGAATTCAAGGGCCATTGCTCCTAAAGTTGATA
CCCCCAAGCTTGGGTCGCAAAAAAAACTGAAATCTAAAAAAAAAATTCCT
TCTACCCCCTTTTTTGGAAATTTAAAAAATTTTCAGGGTTTGGAACCCTT
GGCCAAAAGGGAAAAAGGCAATGAACTTCGGGGATTTTGCGCCATAAGCT
GGCGGGCCAAAATAAATTCCCTCTATTTAATATGGAACCGACCGCCTAAT
CCGGAC
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