FC921768
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921768 vs. ExPASy Swiss-Prot
Match: EF1A_AERPE (Elongation factor 1-alpha OS=Aeropyrum pernix GN=tuf PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.429e-22 Identity = 46/79 (58.23%), Postives = 62/79 (78.48%), Query Frame = 2 Query: 80 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLNKLKAERERGITIDIALWKFET 316 EK H+N+VVIGHVD GKST GHL+Y+LG I+++ ++ E++A K SFK+AW+L+K+K ERERGITID+ KFET Sbjct: 3 EKPHMNLVVIGHVDHGKSTLVGHLLYRLGYIEEKKLKELEEQAKSRGKESFKFAWILDKMKEERERGITIDLTFMKFET 81
BLAST of FC921768 vs. ExPASy Swiss-Prot
Match: EF1A_DESMO (Elongation factor 1-alpha OS=Desulfurococcus mobilis GN=tuf PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.867e-22 Identity = 43/79 (54.43%), Postives = 64/79 (81.01%), Query Frame = 2 Query: 80 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLNKLKAERERGITIDIALWKFET 316 +K H+NIV+IGHVD GKST TGH++Y+LG D++ ++ E+E+ +M K SFK+AW+L+++K ERERG+TI ++ KFET Sbjct: 5 QKPHLNIVIIGHVDHGKSTMTGHILYRLGYFDEKTVKMIEEESKKMGKESFKFAWLLDRMKEERERGVTISLSYMKFET 83
BLAST of FC921768 vs. ExPASy Swiss-Prot
Match: EF1A_STAMF (Elongation factor 1-alpha OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=tuf PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.184e-22 Identity = 46/82 (56.10%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 71 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLNKLKAERERGITIDIALWKFET 316 M K H+N+VVIGHVD GKST GH++Y+LG +D++ I+ E+EA + K SFK+AW+L+KLK ERERG+TI + KFET Sbjct: 1 MSSGKPHLNLVVIGHVDHGKSTLVGHILYRLGLVDQKTIQMLEEEAKKRGKESFKFAWLLDKLKEERERGVTIALTYMKFET 82
BLAST of FC921768 vs. ExPASy Swiss-Prot
Match: EF1A_ARCFU (Elongation factor 1-alpha OS=Archaeoglobus fulgidus GN=tuf PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.210e-21 Identity = 46/82 (56.10%), Postives = 61/82 (74.39%), Query Frame = 2 Query: 71 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLNKLKAERERGITIDIALWKFET 316 M KEK HIN+ IGHVD GKST G L+Y+ G I + +IE+ KEA E K +F++AWV+++LK ERERG+TID+A KF+T Sbjct: 1 MAKEKEHINVAFIGHVDHGKSTLIGRLLYETGEIPEHIIEKMRKEAQEKGKATFEFAWVMDRLKEERERGVTIDVAHRKFQT 82
BLAST of FC921768 vs. ExPASy Swiss-Prot
Match: EF1A_METHJ (Elongation factor 1-alpha OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=tuf PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.696e-21 Identity = 46/82 (56.10%), Postives = 60/82 (73.17%), Query Frame = 2 Query: 71 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLNKLKAERERGITIDIALWKFET 316 M EK HIN+ VIGH+D GKSTT G L+Y+ G + +IE+++KEA K SF +AWV++ LK ERERGITIDIA +F+T Sbjct: 1 MATEKPHINLAVIGHIDHGKSTTVGRLMYEAGAVPAHIIEQYKKEAESKGKGSFAFAWVMDNLKEERERGITIDIAHKRFDT 82
BLAST of FC921768 vs. ExPASy Swiss-Prot
Match: EF1A_GIALA (Elongation factor 1-alpha (Fragment) OS=Giardia lamblia GN=TEF1 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.521e-21 Identity = 47/62 (75.81%), Postives = 53/62 (85.48%), Query Frame = 2 Query: 131 STTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLNKLKAERERGITIDIALWKFET 316 ST TGHLIYK GGID+R I+ +EK A EM K SFKYAWVL++LK ERERGITI+IALWKFET Sbjct: 1 STLTGHLIYKCGGIDQRTIDEYEKRATEMGKGSFKYAWVLDQLKDERERGITINIALWKFET 62
BLAST of FC921768 vs. ExPASy Swiss-Prot
Match: EF1A_PYRHO (Elongation factor 1-alpha OS=Pyrococcus horikoshii GN=tuf PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.006e-21 Identity = 51/82 (62.20%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 71 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLNKLKAERERGITIDIALWKFET 316 M KEK H+NIV IGHVD GKSTT G L+Y G I + +I++FE E E K SFK+AWV+++LK ERERGITID+A KFET Sbjct: 1 MPKEKPHVNIVFIGHVDHGKSTTIGRLLYDTGNIPETIIKKFE-EMGEKGK-SFKFAWVMDRLKEERERGITIDVAHTKFET 80
BLAST of FC921768 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAB (Elongation factor 1-alpha OS=Pyrococcus abyssi GN=tuf PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.006e-21 Identity = 51/82 (62.20%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 71 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLNKLKAERERGITIDIALWKFET 316 M KEK H+NIV IGHVD GKSTT G L+Y G I + +I++FE E E K SFK+AWV+++LK ERERGITID+A KFET Sbjct: 1 MPKEKPHVNIVFIGHVDHGKSTTIGRLLYDTGNIPETIIKKFE-EMGEKGK-SFKFAWVMDRLKEERERGITIDVAHTKFET 80
BLAST of FC921768 vs. ExPASy Swiss-Prot
Match: EF1A_PYRFU (Elongation factor 1-alpha OS=Pyrococcus furiosus GN=tuf PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 7.844e-21 Identity = 50/82 (60.98%), Postives = 63/82 (76.83%), Query Frame = 2 Query: 71 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLNKLKAERERGITIDIALWKFET 316 M K+K H+NIV IGHVD GKSTT G L+Y G I +++I++FE E E K SFK+AWV+++LK ERERGITID+A KFET Sbjct: 1 MPKDKPHVNIVFIGHVDHGKSTTIGRLLYDTGNIPEQIIKKFE-EMGEKGK-SFKFAWVMDRLKEERERGITIDVAHTKFET 80
BLAST of FC921768 vs. ExPASy Swiss-Prot
Match: EF1A_METTP (Elongation factor 1-alpha OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=tuf PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 7.844e-21 Identity = 43/82 (52.44%), Postives = 61/82 (74.39%), Query Frame = 2 Query: 71 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLNKLKAERERGITIDIALWKFET 316 M K H+N+ IGHVD GKST G ++Y++G ID+ +IE++ KEAA K +F++AWV++ LK ERERG+TIDIA +F+T Sbjct: 1 MADTKPHLNLAFIGHVDHGKSTLVGRMMYEMGAIDEHIIEQYRKEAAAKGKATFEFAWVMDSLKEERERGVTIDIAHQRFDT 82 The following BLAST results are available for this feature:
BLAST of FC921768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 178
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921768 ID=FC921768; Name=FC921768; organism=Citrus sinensis; type=EST; length=321bpback to top |