FC921768
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921768 vs. ExPASy Swiss-Prot
Match: EF1A_METPE (Elongation factor 1-alpha OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=tuf PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.338e-20 Identity = 44/82 (53.66%), Postives = 59/82 (71.95%), Query Frame = 2 Query: 71 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLNKLKAERERGITIDIALWKFET 316 M +K H+N+ VIGH+D GKSTT G L+++ G + +IE F KEA K SF++AWV++ LK ERERGITIDIA +F+T Sbjct: 1 MANDKPHMNLAVIGHIDHGKSTTVGRLMFETGAVPAHIIENFRKEAESKGKGSFEFAWVMDNLKEERERGITIDIAHKRFDT 82
BLAST of FC921768 vs. ExPASy Swiss-Prot
Match: EF1A_METMJ (Elongation factor 1-alpha OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=tuf PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.338e-20 Identity = 45/82 (54.88%), Postives = 59/82 (71.95%), Query Frame = 2 Query: 71 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLNKLKAERERGITIDIALWKFET 316 M EK H+N+ VIGH+D GKSTT G L+++ G + +IE F KEA K SF++AWV++ LK ERERGITIDIA +F+T Sbjct: 1 MAAEKPHMNLAVIGHIDHGKSTTVGRLLFETGTVPPHIIESFRKEAESKGKGSFEFAWVMDSLKEERERGITIDIAHKRFDT 82
BLAST of FC921768 vs. ExPASy Swiss-Prot
Match: HBS1L_PONAB (HBS1-like protein OS=Pongo abelii GN=HBS1L PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.747e-20 Identity = 43/79 (54.43%), Postives = 61/79 (77.22%), Query Frame = 2 Query: 83 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLNKLKAERERGITIDIALWKFETT 319 K +N+VVIGHVD+GKST GH++Y LG I+KR + ++E+E+ + K SF YAWVL++ ERERG+T+D+ + KFETT Sbjct: 258 KQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETT 336
BLAST of FC921768 vs. ExPASy Swiss-Prot
Match: HBS1L_HUMAN (HBS1-like protein OS=Homo sapiens GN=HBS1L PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.747e-20 Identity = 43/79 (54.43%), Postives = 61/79 (77.22%), Query Frame = 2 Query: 83 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLNKLKAERERGITIDIALWKFETT 319 K +N+VVIGHVD+GKST GH++Y LG I+KR + ++E+E+ + K SF YAWVL++ ERERG+T+D+ + KFETT Sbjct: 258 KQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETT 336
BLAST of FC921768 vs. ExPASy Swiss-Prot
Match: EF1A_PYRWO (Elongation factor 1-alpha OS=Pyrococcus woesei GN=tuf PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.747e-20 Identity = 49/82 (59.76%), Postives = 63/82 (76.83%), Query Frame = 2 Query: 71 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLNKLKAERERGITIDIALWKFET 316 M K+K H+NIV IGHVD GKSTT G L+Y G I +++I++FE E E K SFK+AWV+++L+ ERERGITID+A KFET Sbjct: 3 MPKDKPHVNIVFIGHVDHGKSTTIGRLLYDTGNIPEQIIKKFE-EMGEKGK-SFKFAWVMDRLREERERGITIDVAHTKFET 82
BLAST of FC921768 vs. ExPASy Swiss-Prot
Match: HBS1L_RAT (HBS1-like protein OS=Rattus norvegicus GN=Hbs1l PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 2.282e-20 Identity = 42/79 (53.16%), Postives = 61/79 (77.22%), Query Frame = 2 Query: 83 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLNKLKAERERGITIDIALWKFETT 319 K +N+VVIGHVD+GKST GH++Y LG ++KR + ++E+E+ + K SF YAWVL++ ERERG+T+D+ + KFETT Sbjct: 253 KQLLNLVVIGHVDAGKSTLMGHMLYLLGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETT 331
BLAST of FC921768 vs. ExPASy Swiss-Prot
Match: HBS1L_MOUSE (HBS1-like protein OS=Mus musculus GN=Hbs1l PE=1 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 2.282e-20 Identity = 42/79 (53.16%), Postives = 61/79 (77.22%), Query Frame = 2 Query: 83 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLNKLKAERERGITIDIALWKFETT 319 K +N+VVIGHVD+GKST GH++Y LG ++KR + ++E+E+ + K SF YAWVL++ ERERG+T+D+ + KFETT Sbjct: 256 KQLLNLVVIGHVDAGKSTLMGHMLYLLGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETT 334
BLAST of FC921768 vs. ExPASy Swiss-Prot
Match: EF1A_THESM (Elongation factor 1-alpha OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=tuf PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 2.981e-20 Identity = 49/82 (59.76%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 71 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLNKLKAERERGITIDIALWKFET 316 M KEK H+NIV IGHVD GKSTT G L++ I +++I++FE E E K SFK+AWV+++LK ERERGITID+A KFET Sbjct: 1 MAKEKPHVNIVFIGHVDHGKSTTIGRLLFDTANIPEQIIKKFE-EMGEKGK-SFKFAWVMDRLKEERERGITIDVAHTKFET 80
BLAST of FC921768 vs. ExPASy Swiss-Prot
Match: EF1A_THECE (Elongation factor 1-alpha OS=Thermococcus celer GN=tuf PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 2.981e-20 Identity = 50/82 (60.98%), Postives = 61/82 (74.39%), Query Frame = 2 Query: 71 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLNKLKAERERGITIDIALWKFET 316 M KEK HINIV IGHVD GKSTT G L++ I + +I++FE E E K SFK+AWV+++LK ERERGITID+A KFET Sbjct: 1 MAKEKPHINIVFIGHVDHGKSTTIGRLLFDTANIPENIIKKFE-EMGEKGK-SFKFAWVMDRLKEERERGITIDVAHTKFET 80
BLAST of FC921768 vs. ExPASy Swiss-Prot
Match: EF1A_THEON (Elongation factor 1-alpha OS=Thermococcus onnurineus (strain NA1) GN=tuf PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 3.893e-20 Identity = 49/82 (59.76%), Postives = 61/82 (74.39%), Query Frame = 2 Query: 71 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLNKLKAERERGITIDIALWKFET 316 M KEK H+NIV IGHVD GKSTT G L++ I + +I++FE E E K SFK+AWV+++LK ERERGITID+A KFET Sbjct: 1 MAKEKPHVNIVFIGHVDHGKSTTIGRLLFDTANIPENIIKKFE-EMGEKGK-SFKFAWVMDRLKEERERGITIDVAHTKFET 80 The following BLAST results are available for this feature:
BLAST of FC921768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 178
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921768 ID=FC921768; Name=FC921768; organism=Citrus sinensis; type=EST; length=321bpback to top |