CK937060
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937060 vs. ExPASy Swiss-Prot
Match: HNRPG_PANTR (Heterogeneous nuclear ribonucleoprotein G OS=Pan troglodytes GN=RBMX PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.444e-13 Identity = 37/84 (44.05%), Postives = 50/84 (59.52%), Query Frame = 3 Query: 69 MASGDVEFRCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 320 M D + F+GGL T + +L FG YG I+E ++ DRET +SRGF FVTF +DA MNG++LDG+ I V +A Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
BLAST of CK937060 vs. ExPASy Swiss-Prot
Match: HNRPG_HUMAN (Heterogeneous nuclear ribonucleoprotein G OS=Homo sapiens GN=RBMX PE=1 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 1.444e-13 Identity = 37/84 (44.05%), Postives = 50/84 (59.52%), Query Frame = 3 Query: 69 MASGDVEFRCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 320 M D + F+GGL T + +L FG YG I+E ++ DRET +SRGF FVTF +DA MNG++LDG+ I V +A Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
BLAST of CK937060 vs. ExPASy Swiss-Prot
Match: RT19_ARATH (40S ribosomal protein S19, mitochondrial OS=Arabidopsis thaliana GN=RPS19 PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.463e-13 Identity = 39/96 (40.62%), Postives = 61/96 (63.54%), Query Frame = 3 Query: 45 VPILSFLLMASGDVEF---RCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 323 VP+ S L G + + + ++GGL+ T + SL +AF ++ + E++++ ++ TGRSRG+GFV F E S AI MNGQ L+G NI+VN A+ Sbjct: 17 VPVSSML----GSLRYMSTKLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAMNGQELNGFNISVNVAK 108
BLAST of CK937060 vs. ExPASy Swiss-Prot
Match: ROC1_NICSY (29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.217e-13 Identity = 34/83 (40.96%), Postives = 54/83 (65.06%), Query Frame = 3 Query: 75 SGDVEFRCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 323 S D R +VG LAW +L F G ++++K++ DR++GRSRGFGFVT+ + + +AIE ++G +L+GR I V+ A+ Sbjct: 183 SFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAE 265
BLAST of CK937060 vs. ExPASy Swiss-Prot
Match: ROC1_NICPL (30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.217e-13 Identity = 34/83 (40.96%), Postives = 54/83 (65.06%), Query Frame = 3 Query: 75 SGDVEFRCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 323 S D R +VG LAW +L F G ++++K++ DR++GRSRGFGFVT+ + + +AIE ++G +L+GR I V+ A+ Sbjct: 189 SFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAE 271
BLAST of CK937060 vs. ExPASy Swiss-Prot
Match: RBM3_HUMAN (Putative RNA-binding protein 3 OS=Homo sapiens GN=RBM3 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.217e-13 Identity = 36/78 (46.15%), Postives = 52/78 (66.67%), Query Frame = 3 Query: 87 EFRCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 320 E + FVGGL + T + +L + F ++G I E ++ DRET RSRGFGF+TF + + A+ MNG++LDGR I V+ A Sbjct: 5 EGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAMNGESLDGRQIRVDHA 82
BLAST of CK937060 vs. ExPASy Swiss-Prot
Match: HNRPG_RAT (Heterogeneous nuclear ribonucleoprotein G OS=Rattus norvegicus GN=Rbmx PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.202e-13 Identity = 36/84 (42.86%), Postives = 49/84 (58.33%), Query Frame = 3 Query: 69 MASGDVEFRCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 320 M D + F+GGL T + +L FG YG I+E ++ DRET +SRGF FVTF +D MNG++LDG+ I V +A Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARDMNGKSLDGKAIKVEQA 84
BLAST of CK937060 vs. ExPASy Swiss-Prot
Match: HNRPG_MOUSE (Heterogeneous nuclear ribonucleoprotein G OS=Mus musculus GN=Rbmx PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.361e-13 Identity = 36/84 (42.86%), Postives = 49/84 (58.33%), Query Frame = 3 Query: 69 MASGDVEFRCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 320 M D + F+GGL T + +L FG YG I+E ++ DRET +SRGF FVT +DA MNG++LDG+ I V +A Sbjct: 1 MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPADAKDAARDMNGKSLDGKAIKVEQA 84
BLAST of CK937060 vs. ExPASy Swiss-Prot
Match: HNRPG_BOVIN (Heterogeneous nuclear ribonucleoprotein G OS=Bos taurus GN=RBMX PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.223e-12 Identity = 36/84 (42.86%), Postives = 49/84 (58.33%), Query Frame = 3 Query: 69 MASGDVEFRCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 320 M D + F+GGL T + SL FG YG I E ++ DRET +SRGF F+TF + A+ MNG++LDG+ I V +A Sbjct: 1 MVEADRPGKLFIGGLNLETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPADAKAAVRDMNGKSLDGKAIKVAQA 84
BLAST of CK937060 vs. ExPASy Swiss-Prot
Match: HNRGT_MACFA (RNA-binding motif protein, X-linked-like-2 OS=Macaca fascicularis GN=RBMXL2 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.724e-12 Identity = 36/84 (42.86%), Postives = 50/84 (59.52%), Query Frame = 3 Query: 69 MASGDVEFRCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 320 M D + F+GGL T + +L FG YG I+E ++ DRET +SRGF FVTF + + A MNG++LDG+ I V +A Sbjct: 1 MVEADRPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPANAKAAARDMNGKSLDGKAIKVAQA 84 The following BLAST results are available for this feature:
BLAST of CK937060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937060 ID=CK937060; Name=CK937060; organism=Citrus sinensis; type=EST; length=721bpback to top |