CK937002

Overview
NameCK937002
Unique NameCK937002
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length856
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937002 vs. ExPASy Swiss-Prot
Match: KAD_ECO57 (Adenylate kinase OS=Escherichia coli O157:H7 GN=adk PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.892e-22
Identity = 68/201 (33.83%), Postives = 101/201 (50.25%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKG-----KVRKIDAAKPVAEV 718
            LG PG+GKGTQ   I+E +G   +S GD+LRA +KSGSE G   ++++  GK+V  E+ I L+ ++  +E   + FL+DGFPR      A +    I  ++VL FD  +E +  RI+ R                                R+DD  ET+RKR   + + + P++ YY  +      K  K+D  KPVAEV
Sbjct:    6 LGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKE-AGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEV 205          
BLAST of CK937002 vs. ExPASy Swiss-Prot
Match: KAD_ECO55 (Adenylate kinase OS=Escherichia coli (strain 55989 / EAEC) GN=adk PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.892e-22
Identity = 68/201 (33.83%), Postives = 101/201 (50.25%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKG-----KVRKIDAAKPVAEV 718
            LG PG+GKGTQ   I+E +G   +S GD+LRA +KSGSE G   ++++  GK+V  E+ I L+ ++  +E   + FL+DGFPR      A +    I  ++VL FD  +E +  RI+ R                                R+DD  ET+RKR   + + + P++ YY  +      K  K+D  KPVAEV
Sbjct:    6 LGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKE-AGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEV 205          
BLAST of CK937002 vs. ExPASy Swiss-Prot
Match: KAD_ECO24 (Adenylate kinase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=adk PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.892e-22
Identity = 68/201 (33.83%), Postives = 101/201 (50.25%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKG-----KVRKIDAAKPVAEV 718
            LG PG+GKGTQ   I+E +G   +S GD+LRA +KSGSE G   ++++  GK+V  E+ I L+ ++  +E   + FL+DGFPR      A +    I  ++VL FD  +E +  RI+ R                                R+DD  ET+RKR   + + + P++ YY  +      K  K+D  KPVAEV
Sbjct:    6 LGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKE-AGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEV 205          
BLAST of CK937002 vs. ExPASy Swiss-Prot
Match: KAD2_DROVI (Adenylate kinase 2, mitochondrial OS=Drosophila virilis GN=Adk2 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.892e-22
Identity = 64/214 (29.91%), Postives = 110/214 (51.40%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRN-----------EENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQG-------------------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTPK 751
            LG PGSGKGTQ   + + F   HLS GD+LRAEI SGS+ G  ++ ++ EGK+V  ++ + ++   +++    + FL+DGFPR            ++ R + +AV     EF +  +     +  R++++  G                         R DDNV+ ++KR + + + + P+V YY  +G   K+DAAK  ++VF ++ ++F  K
Sbjct:   24 LGPPGSGKGTQAPLLQKKFCVCHLSTGDMLRAEISSGSKLGAELKKVMDEGKLVSDDLVVDMIDSNLDKPECKNGFLLDGFPRTVVQAQKLDTLLDKRRTSLDAVI----EFAIDDNLLVRRITGRLIHQASGRSYHEEFAPPKVQMKDDITGEPLIKRSDDNVDALKKRLEAYHKQTKPLVDYYGLRGLHFKVDAAKKASDVFSSIDSIFQRK 233          
BLAST of CK937002 vs. ExPASy Swiss-Prot
Match: KAD_SHIDS (Adenylate kinase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=adk PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.083e-22
Identity = 68/201 (33.83%), Postives = 101/201 (50.25%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQ-KAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKG-----KVRKIDAAKPVAEV 718
            LG PG+GKGTQ   I+E +G   +S GD+LRA +KSGSE G   ++++  GK+V  E+ I L++ +  +E   + FL+DGFPR      A +    I  ++VL FD  +E +  RI+ R                                R+DD  ET+RKR   + + + P++ YY  +      K  K+D  KPVAEV
Sbjct:    6 LGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKGRIAQEDCRNGFLLDGFPRTIPQADAMKE-AGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEV 205          
BLAST of CK937002 vs. ExPASy Swiss-Prot
Match: KAD_ECO45 (Adenylate kinase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=adk PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.083e-22
Identity = 69/208 (33.17%), Postives = 104/208 (50.00%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKG-----KVRKIDAAKPVAEVFDAVKAV 739
            LG PG+GKGTQ   I+E +G   +S GD+LRA +KSGSE G   ++++  GK+V  E+ I L+ ++  +E     FL+DGFPR      A +    I  ++VL FD  +E +  RI+ R                                R+DD  ET+RKR   + + + P++ YY  +      K  K+D  KPVAEV  A++ +
Sbjct:    6 LGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRYGFLLDGFPRTIPQADAMKE-AGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRAALEKI 212          
BLAST of CK937002 vs. ExPASy Swiss-Prot
Match: KAD2_DROMO (Adenylate kinase 2, mitochondrial OS=Drosophila mojavensis GN=Adk2 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.083e-22
Identity = 64/207 (30.92%), Postives = 103/207 (49.76%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRNEENRAAFEAV---TKIEPEFVLFFDCSEEEMERRILNR-----------------------------NQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVF 742
            LG PGSGKGTQ   + E F   HLS GD+LRAEI SGS+ G  ++ ++ EGK+V  ++ + ++   +++    + FL+DGFPR        +++    K   + V+ F   +  + RRI  R                                R DDN E ++KR + + + + P+V YY  +G   K+DAAK  ++VF  + ++F
Sbjct:   24 LGPPGSGKGTQAPLLKEKFCVCHLSTGDMLRAEIASGSKLGAELKKVMDEGKLVSDDLVVDMIDSNLDKPECKNGFLLDGFPRTVVQAQKLDSLLDKRKTSLDAVIEFAIDDNLLVRRITGRLIHQASGRSYHEEFAPPKVPMKDDITGEPLMKRSDDNAEALKKRLEAYHKQTKPLVDYYGLRGLHFKVDAAKKASDVFSTIDSIF 230          
BLAST of CK937002 vs. ExPASy Swiss-Prot
Match: KAD_SYNS3 (Adenylate kinase OS=Synechococcus sp. (strain CC9311) GN=adk PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.639e-22
Identity = 54/176 (30.68%), Postives = 101/176 (57.39%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTK--IEP-EFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAV 739
            LG PG+GKGTQ A + +  G  HLS GDLLRAE+ +GS  G   ++++  G++V   + + +++  +       +L+DGFPRN     A + + +   +P E V+  +  +  +  R+L+R  GR+DDN   IR R  V+ + + P++++Y  +G ++ ++A   +  + + ++ V
Sbjct:    8 LGPPGAGKGTQAALLCDRHGLRHLSTGDLLRAEVSAGSALGQEAESVMNRGELVSDSLVLAIVKAQLGALNGQGWLLDGFPRNVAQAEALDPLLQELNQPIEAVVLLELDDAVLIERLLSR--GRDDDNEAVIRNRLVVYADKTEPLIEHYRQRGLLQSVEAHGSIEAITERIEGV 181          
BLAST of CK937002 vs. ExPASy Swiss-Prot
Match: KAD_SYNJA (Adenylate kinase OS=Synechococcus sp. (strain JA-3-3Ab) GN=adk PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.639e-22
Identity = 60/179 (33.52%), Postives = 104/179 (58.10%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNR--NQGREDDNVE-TIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAV 739
            LG PG+GKGTQ   +   +    +S GDLLRAE+K+ +  G   +  +  G++VP EV I +++  ++ S    +++DGFPR      A E + +    + + VL  +  ++ +  R+L R   QGR DD  E  I KR +V+ E + P++ +YEA+G++R+ID  +P+  V + ++A+
Sbjct:    7 LGPPGAGKGTQAERLAAIYHTPKISTGDLLRAEVKAQTPLGCQAKVYMDAGELVPDEVLIGMVKGQLQHSPAQGWILDGFPRTLAQAEALEELLRELGQDYDHVLNLEVPDDVVVARLLARGKEQGRSDDADEAVILKRLQVYREQTAPLIDFYEARGRLRRIDGNQPMESVQEHLRAL 185          
BLAST of CK937002 vs. ExPASy Swiss-Prot
Match: KAD_STRPS (Adenylate kinase OS=Streptococcus pneumoniae (strain CGSP14) GN=adk PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.639e-22
Identity = 69/207 (33.33%), Postives = 108/207 (52.17%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVT-----IKLLQKAMEESGNDKFLIDGFPRNEENRAAFE---AVTKIEPEFVLFFDCSE----EEMERRILNRNQG--------------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFT 745
            +G PG+GKGTQ A IVE F   H+S GD+ RA + + +E G + ++ I +G++VP EVT      +L Q  ++E+G   FL+DG+PR  E   A +   A   IE E V+  + +     E +  RI++R  G                    REDD  ET+++R  V +    P++ +Y AKG V  I+  + + +VF  ++ V T
Sbjct:    6 MGLPGAGKGTQAAKIVEQFHVAHISTGDMFRAAMANQTEMGVLAKSYIDKGELVPDEVTNGIVKERLSQDDIKETG---FLLDGYPRTIEQAHALDKTLAELGIELEGVINIEVNPDSLLERLSGRIIHRVTGETFHKVFNPPVDYKEEDYYQREDDKPETVKRRLDVNIAQGEPIIAHYRAKGLVHDIEGNQDINDVFSDIEKVLT 209          
The following BLAST results are available for this feature:
BLAST of CK937002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_ECO573.892e-2233.83Adenylate kinase OS=Escherichia coli O157:H7 GN=ad... [more]
KAD_ECO553.892e-2233.83Adenylate kinase OS=Escherichia coli (strain 55989... [more]
KAD_ECO243.892e-2233.83Adenylate kinase OS=Escherichia coli O139:H28 (str... [more]
KAD2_DROVI3.892e-2229.91Adenylate kinase 2, mitochondrial OS=Drosophila vi... [more]
KAD_SHIDS5.083e-2233.83Adenylate kinase OS=Shigella dysenteriae serotype ... [more]
KAD_ECO455.083e-2233.17Adenylate kinase OS=Escherichia coli O45:K1 (strai... [more]
KAD2_DROMO5.083e-2230.92Adenylate kinase 2, mitochondrial OS=Drosophila mo... [more]
KAD_SYNS36.639e-2230.68Adenylate kinase OS=Synechococcus sp. (strain CC93... [more]
KAD_SYNJA6.639e-2233.52Adenylate kinase OS=Synechococcus sp. (strain JA-3... [more]
KAD_STRPS6.639e-2233.33Adenylate kinase OS=Streptococcus pneumoniae (stra... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004515_D10 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IIF_D10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937002 ID=CK937002; Name=CK937002; organism=Citrus sinensis; type=EST; length=856bp
GGGAACAACAAAAAAACTAACATTGGCAATTGGCATCCCTCTGCCTTCTT
TCTTTCCCTCCATATTCTTCTCTCTCTCTCCAAACAAAACAACGCTCGCA
ATTCGCTAAGATCGGTTATTCAGACTGAGTTAGTTGGCGCTGATGGGAAC
TGTGGTTGAAACTCCTGTCAAGGAAGCAGATGCTACCGTAACTGTGAAGA
AGCCCACTGTTGTTTTTGTTTTGGGTGGACCAGGCAGTGGAAAAGGAACC
CAGTGCGCAAACATTGTTGAACACTTTGGATACACCCATCTCAGTGCTGG
TGATCTTCTCAGAGCCGAAATCAAATCTGGCTCTGAAAATGGAACCATGA
TTCAGAACATGATTAAAGAGGGAAAAATCGTTCCTTCAGAGGTCACAATT
AAGCTTCTCCAAAAAGCAATGGAGGAAAGTGGAAATGATAAATTTCTCAT
CGATGGTTTTCCCAGAAACGAGGAAAATCGTGCTGCATTTGAAGCTGTTA
CCAAAATTGAGCCAGAATTCGTTCTGTTTTTTGACTGTTCTGAGGAGGAG
ATGGAGAGGCGCATTTTGAATAGGAATCAGGGAAGAGAAGATGATAACGT
TGAGACAATTAGGAAGCGGTTTAAGGTTTTCTTAGAATCTAGTCTCCCTG
TGGTTCAATATTATGAAGCTAAGGGTAAAGTTCGGAAGATTGATGCCGCA
AAGCCTGTTGCAGAGGTTTTTGATGCTGTTAAAGCTGTTTTTACCCCAAA
AGATGAGAAGGCTGCTGCTTAGGTCTTCTCTGTCCAGAGTATCAGATTTA
ATATCAAGGTGGTGGTATTGTTGTTGGCTGCTGCCTATTATTGTACTTTA
TTATTA
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