CK936989

Overview
NameCK936989
Unique NameCK936989
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length695
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936989 vs. ExPASy Swiss-Prot
Match: KSG9_ARATH (Shaggy-related protein kinase iota OS=Arabidopsis thaliana GN=ASK9 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.662e-46
Identity = 87/108 (80.56%), Postives = 98/108 (90.74%), Query Frame = 1
Query:  370 EKEMEATVVDGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDKDELYL 693
            +KEM A V++GN   TGHII TTIGG+NG+PKQTISYMAERVVG GSFGIVFQAKCLETGE+VAIKKVLQD+RYKNRELQ MR +DHPNV+SLKHCFFSTT +DEL+L
Sbjct:   34 DKEMSAAVIEGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGESVAIKKVLQDRRYKNRELQLMRPMDHPNVISLKHCFFSTTSRDELFL 141          
BLAST of CK936989 vs. ExPASy Swiss-Prot
Match: KSGT_BRANA (Shaggy-related protein kinase theta OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 3.022e-45
Identity = 89/128 (69.53%), Postives = 106/128 (82.81%), Query Frame = 1
Query:  331 EEINEMKIKGERV-------EKEMEATVVDGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDKDELYL 693
            E +N+M+++ +         +K+ME  +V+G GTETG +I TT+GGR+G+PKQTISYMA+RVVG GSFG+VFQAKCLETGE VAIKKVLQDKRYKNRELQ MRL DHPNVV L+H FFSTTDKDELYL
Sbjct:   78 EVMNDMRLREDEPHANRGEEDKDMEPPIVNGCGTETGQVITTTVGGRDGKPKQTISYMAQRVVGTGSFGVVFQAKCLETGEQVAIKKVLQDKRYKNRELQIMRLQDHPNVVRLRHSFFSTTDKDELYL 205          
BLAST of CK936989 vs. ExPASy Swiss-Prot
Match: KSG4_ARATH (Shaggy-related protein kinase delta OS=Arabidopsis thaliana GN=ASK4 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.478e-39
Identity = 78/120 (65.00%), Postives = 96/120 (80.00%), Query Frame = 1
Query:  343 EMKIKGERV---EKEMEATVVDGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDKDELYL 693
            EMKI+ +     E++ E  ++DG G E GH+I TT+ GRNGQ +QT+SY+AE VVG GSFG+VFQAKC ETGE VAIKKVLQDKRYKNRELQ M++LDHPNVV LKH F+S T+ +E+YL
Sbjct:   34 EMKIRDKTEADEERDSEPDIIDGVGAEPGHVITTTLPGRNGQSRQTVSYIAEHVVGTGSFGMVFQAKCRETGEVVAIKKVLQDKRYKNRELQIMQMLDHPNVVCLKHSFYSRTENEEVYL 153          
BLAST of CK936989 vs. ExPASy Swiss-Prot
Match: KSG10_ARATH (Shaggy-related protein kinase kappa OS=Arabidopsis thaliana GN=ASK10 PE=1 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 7.209e-39
Identity = 74/108 (68.52%), Postives = 90/108 (83.33%), Query Frame = 1
Query:  370 EKEMEATVVDGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDKDELYL 693
            E++ E  ++DG G E GH+I TT+ GRNGQ +QT+SY++E VVG GSFG+VFQAKC ETGE VAIKKVLQDKRYKNRELQ M++LDHPN V+LKH FFS TD +E+YL
Sbjct:   47 ERDSEPDIIDGAGAEPGHVIRTTLRGRNGQSRQTVSYISEHVVGTGSFGMVFQAKCRETGEVVAIKKVLQDKRYKNRELQIMQMLDHPNAVALKHSFFSRTDNEEVYL 154          
BLAST of CK936989 vs. ExPASy Swiss-Prot
Match: KSG2_ARATH (Shaggy-related protein kinase beta OS=Arabidopsis thaliana GN=ASK2 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.578e-38
Identity = 76/111 (68.47%), Postives = 89/111 (80.18%), Query Frame = 1
Query:  361 ERVEKEMEATVVDGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDKDELYL 693
            + + ++M+  ++ GNGTE+G II T   G N Q  +TISY AE V+G GSFG+VFQAKCLET E VAIKKVLQDKRYKNRELQ MR+LDHPNVV LKH FFSTT+KDELYL
Sbjct:   63 KEIREDMDCGIIKGNGTESGRIITTKKKGLNDQKDKTISYRAEHVIGTGSFGVVFQAKCLETEEKVAIKKVLQDKRYKNRELQIMRMLDHPNVVELKHSFFSTTEKDELYL 173          
BLAST of CK936989 vs. ExPASy Swiss-Prot
Match: GSK3_CAEBR (Glycogen synthase kinase-3 OS=Caenorhabditis briggsae GN=gsk-3 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.156e-20
Identity = 51/91 (56.04%), Postives = 66/91 (72.53%), Query Frame = 1
Query:  424 IIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTD-KDELYL 693
            ++V ++       +  ISY  ++V+G GSFG+VF AK   T E VAIKKVLQDKR+KNRELQ MR L+HPN+V LK+ F+S+ D KDELYL
Sbjct:   18 MVVASVATDGVDQQVEISYYDQKVIGNGSFGVVFLAKLSTTNEMVAIKKVLQDKRFKNRELQIMRKLNHPNIVKLKYFFYSSGDKKDELYL 108          
BLAST of CK936989 vs. ExPASy Swiss-Prot
Match: GSK3B_RAT (Glycogen synthase kinase-3 beta OS=Rattus norvegicus GN=Gsk3b PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.156e-20
Identity = 51/100 (51.00%), Postives = 72/100 (72.00%), Query Frame = 1
Query:  397 DGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTD-KDELYL 693
            D +G++   ++ T   G+     Q +SY   +V+G GSFG+V+QAK  ++GE VAIKKVLQDKR+KNRELQ MR LDH N+V L++ F+S+ + KDE+YL
Sbjct:   31 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128          
BLAST of CK936989 vs. ExPASy Swiss-Prot
Match: GSK3B_MOUSE (Glycogen synthase kinase-3 beta OS=Mus musculus GN=Gsk3b PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.156e-20
Identity = 51/100 (51.00%), Postives = 72/100 (72.00%), Query Frame = 1
Query:  397 DGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTD-KDELYL 693
            D +G++   ++ T   G+     Q +SY   +V+G GSFG+V+QAK  ++GE VAIKKVLQDKR+KNRELQ MR LDH N+V L++ F+S+ + KDE+YL
Sbjct:   31 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128          
BLAST of CK936989 vs. ExPASy Swiss-Prot
Match: GSK3B_HUMAN (Glycogen synthase kinase-3 beta OS=Homo sapiens GN=GSK3B PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.156e-20
Identity = 51/100 (51.00%), Postives = 72/100 (72.00%), Query Frame = 1
Query:  397 DGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTD-KDELYL 693
            D +G++   ++ T   G+     Q +SY   +V+G GSFG+V+QAK  ++GE VAIKKVLQDKR+KNRELQ MR LDH N+V L++ F+S+ + KDE+YL
Sbjct:   31 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128          
BLAST of CK936989 vs. ExPASy Swiss-Prot
Match: GSK3A_MOUSE (Glycogen synthase kinase-3 alpha OS=Mus musculus GN=Gsk3a PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.576e-20
Identity = 52/99 (52.53%), Postives = 73/99 (73.74%), Query Frame = 1
Query:  406 GTETGHI--IVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTD-KDELYL 693
            G ++G +  +V T+G +  +  Q ++Y   +V+G GSFG+V+QA+  ET E VAIKKVLQDKR+KNRELQ MR LDH N+V L++ F+S+ + KDELYL
Sbjct:   94 GRDSGKVTTVVATVG-QGPERSQEVAYTDIKVIGNGSFGVVYQARLAETRELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDELYL 191          
The following BLAST results are available for this feature:
BLAST of CK936989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
KSG9_ARATH4.662e-4680.56Shaggy-related protein kinase iota OS=Arabidopsis ... [more]
KSGT_BRANA3.022e-4569.53Shaggy-related protein kinase theta OS=Brassica na... [more]
KSG4_ARATH2.478e-3965.00Shaggy-related protein kinase delta OS=Arabidopsis... [more]
KSG10_ARATH7.209e-3968.52Shaggy-related protein kinase kappa OS=Arabidopsis... [more]
KSG2_ARATH3.578e-3868.47Shaggy-related protein kinase beta OS=Arabidopsis ... [more]
GSK3_CAEBR1.156e-2056.04Glycogen synthase kinase-3 OS=Caenorhabditis brigg... [more]
GSK3B_RAT1.156e-2051.00Glycogen synthase kinase-3 beta OS=Rattus norvegic... [more]
GSK3B_MOUSE1.156e-2051.00Glycogen synthase kinase-3 beta OS=Mus musculus GN... [more]
GSK3B_HUMAN1.156e-2051.00Glycogen synthase kinase-3 beta OS=Homo sapiens GN... [more]
GSK3A_MOUSE2.576e-2052.53Glycogen synthase kinase-3 alpha OS=Mus musculus G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004515_F11 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IIF_F11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936989 ID=CK936989; Name=CK936989; organism=Citrus sinensis; type=EST; length=695bp
TTTTTTTTTTAATTTTTATTTTAAAATTCTATTCTATTTTACTTTTGTTT
TTGCAAGAGAGTTAGTTGAGCTTCTCTTTATTTCATCCCTCTGTGACAGC
GACCGCATTGAGCTTTGTTTGGATCGAAATATTTGCAAAATGCGAGATGT
TTGCAGCTTCATAGCCCTGCGGACACGGTGATTTTATCTCACTAACGAAA
TATGTACTCTACTGGTATGGCTCCTGCTTCGGCTGTTGCAAAACCTGATG
GCGATGATGTAATGATTGTTGACAAACTCCCAGCAAAACCTGATGATGAC
GATGATGCAATGCCTGTCGATAAACTCCCAGAGGAAATCAATGAAATGAA
GATTAAGGGTGAGAGAGTTGAAAAGGAAATGGAAGCGACCGTGGTTGATG
GAAATGGAACTGAGACTGGCCATATTATTGTAACAACTATTGGTGGTAGA
AATGGCCAACCCAAGCAGACCATAAGTTACATGGCAGAACGCGTAGTCGG
ACAGGGCTCATTTGGAATCGTATTTCAGGCTAAGTGTTTAGAAACTGGGG
AAACTGTTGCAATCAAGAAGGTTTTGCAGGATAAGAGATATAAGAACCGT
GAGCTACAAACAATGCGACTTCTCGATCATCCTAATGTGGTATCACTCAA
ACATTGTTTCTTTTCAACTACCGACAAGGATGAGCTCTATCTCAA
back to top