CK936989

Overview
NameCK936989
Unique NameCK936989
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length695
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936989 vs. ExPASy Swiss-Prot
Match: GSK3_CAEEL (Glycogen synthase kinase-3 OS=Caenorhabditis elegans GN=gsk-3 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.364e-20
Identity = 50/91 (54.95%), Postives = 66/91 (72.53%), Query Frame = 1
Query:  424 IIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTD-KDELYL 693
            ++V ++       +  ISY  ++V+G GSFG+VF AK   T E VAIKKVLQDKR+KNRELQ MR L+HPN+V LK+ F+S+ + KDELYL
Sbjct:   18 MVVASVATDGVDQQVEISYYDQKVIGNGSFGVVFLAKLSTTNEMVAIKKVLQDKRFKNRELQIMRKLNHPNIVKLKYFFYSSGEKKDELYL 108          
BLAST of CK936989 vs. ExPASy Swiss-Prot
Match: GSK3A_RAT (Glycogen synthase kinase-3 alpha OS=Rattus norvegicus GN=Gsk3a PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.364e-20
Identity = 52/99 (52.53%), Postives = 73/99 (73.74%), Query Frame = 1
Query:  406 GTETGHI--IVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTD-KDELYL 693
            G ++G +  +V T+G +  +  Q ++Y   +V+G GSFG+V+QA+  ET E VAIKKVLQDKR+KNRELQ MR LDH N+V L++ F+S+ + KDELYL
Sbjct:   94 GRDSGKVTTVVATLG-QGPERSQEVAYTDIKVIGNGSFGVVYQARLAETRELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDELYL 191          
BLAST of CK936989 vs. ExPASy Swiss-Prot
Match: GSK3A_HUMAN (Glycogen synthase kinase-3 alpha OS=Homo sapiens GN=GSK3A PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 3.364e-20
Identity = 52/99 (52.53%), Postives = 73/99 (73.74%), Query Frame = 1
Query:  406 GTETGHI--IVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTD-KDELYL 693
            G ++G +  +V T+G +  +  Q ++Y   +V+G GSFG+V+QA+  ET E VAIKKVLQDKR+KNRELQ MR LDH N+V L++ F+S+ + KDELYL
Sbjct:   94 GRDSGKVTTVVATLG-QGPERSQEVAYTDIKVIGNGSFGVVYQARLAETRELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDELYL 191          
BLAST of CK936989 vs. ExPASy Swiss-Prot
Match: GSK3B_SPECI (Glycogen synthase kinase-3 beta OS=Spermophilus citellus GN=GSK3B PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.495e-20
Identity = 50/100 (50.00%), Postives = 71/100 (71.00%), Query Frame = 1
Query:  397 DGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTD-KDELYL 693
            D +G++   ++ T   G+     Q +SY   +V+G GSFG+V+QAK  ++GE VAIKKVLQDKR+KNRELQ MR LDH N+V L++ F+S+ + KD +YL
Sbjct:   31 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYL 128          
BLAST of CK936989 vs. ExPASy Swiss-Prot
Match: SGG_DROME (Protein kinase shaggy OS=Drosophila melanogaster GN=sgg PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.181e-19
Identity = 50/92 (54.35%), Postives = 67/92 (72.83%), Query Frame = 1
Query:  430 VTTIGGRNGQPK---QTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDK-DELYL 693
            +TT+    GQ     Q +SY   +V+G GSFG+VFQAK  +TGE VAIKKVLQD+R+KNRELQ MR L+H N+V L + F+S+ +K DE++L
Sbjct:  588 ITTVVATPGQGTDRVQEVSYTDTKVIGNGSFGVVFQAKLCDTGELVAIKKVLQDRRFKNRELQIMRKLEHCNIVKLLYFFYSSGEKRDEVFL 679          
BLAST of CK936989 vs. ExPASy Swiss-Prot
Match: GSK3_DICDI (Glycogen synthase kinase-3 OS=Dictyostelium discoideum GN=gskA PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.181e-19
Identity = 54/127 (42.52%), Postives = 78/127 (61.42%), Query Frame = 1
Query:  346 MKIKGERVEKEMEATVVDGNGTETGHIIVTTIGGRNGQPKQT-----------ISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDKDELYL 693
            M  K + +EK+ + T  +GN   T     ++    + +P+             + Y+ E V+G GSFG+V QA   +T E VAIKKVLQD+RYKNRELQ M++L+H N+VSLK+ F+ T+D DE+YL
Sbjct:    1 MSSKDQILEKDKKETDDNGNKKTTTTTSSSSSSSSSSKPRSNKFDKVIIKSNGVCYITEGVIGNGSFGVVTQAIVADTKEVVAIKKVLQDQRYKNRELQIMKMLNHINIVSLKNSFY-TSDNDEVYL 126          
BLAST of CK936989 vs. ExPASy Swiss-Prot
Match: GSK3H_DROME (Putative glycogen synthase kinase-3 homolog OS=Drosophila melanogaster GN=gskt PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.846e-18
Identity = 51/92 (55.43%), Postives = 64/92 (69.57%), Query Frame = 1
Query:  430 VTTIGGRNG---QPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDK-DELYL 693
            VTT+   N         ISY   +VVG GSFG+VFQAK + + E VAIKKVLQD+R+KNRELQ MR L H N+++LK  FFS+ +K DE+YL
Sbjct:   14 VTTVVATNAFGADVMSEISYTDAKVVGNGSFGVVFQAKMVPSNEMVAIKKVLQDRRFKNRELQIMRKLRHDNIITLKWFFFSSGEKRDEVYL 105          
BLAST of CK936989 vs. ExPASy Swiss-Prot
Match: MRK1_YEAST (Serine/threonine-protein kinase MRK1 OS=Saccharomyces cerevisiae GN=MRK1 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 7.015e-18
Identity = 44/87 (50.57%), Postives = 59/87 (67.82%), Query Frame = 1
Query:  433 TTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDKDELYL 693
            T +  +N      ISY    VVG GSFG+V     +ET + VAIKKVLQD+RYKNREL+TM++L HPN V L++ F+   ++DE+YL
Sbjct:  149 TDVDRKNHGGTIDISYPTTEVVGHGSFGVVVTTVIIETNQKVAIKKVLQDRRYKNRELETMKMLCHPNTVGLQYYFYEKDEEDEVYL 235          
BLAST of CK936989 vs. ExPASy Swiss-Prot
Match: GSK3_SCHPO (Protein kinase gsk3 OS=Schizosaccharomyces pombe GN=gsk3 PE=1 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 3.481e-17
Identity = 45/88 (51.14%), Postives = 61/88 (69.32%), Query Frame = 1
Query:  433 TTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTD-KDELYL 693
            T   G  G+ KQ +SY + +VVG GSFG+V Q   +E+    AIK+VLQDKR+KNRELQ MR++ HPN+V L   +++T D  DE+YL
Sbjct:   18 TARDGSTGEVKQ-LSYTSSKVVGSGSFGVVMQVHLIESDSKAAIKRVLQDKRFKNRELQIMRIMKHPNIVDLIAYYYTTGDNSDEVYL 104          
BLAST of CK936989 vs. ExPASy Swiss-Prot
Match: MDS1_YEAST (Serine/threonine-protein kinase MDS1/RIM11 OS=Saccharomyces cerevisiae GN=MDS1 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.938e-17
Identity = 41/74 (55.41%), Postives = 53/74 (71.62%), Query Frame = 1
Query:  472 ISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDKDELYL 693
            IS+    VVG GSFG+VF     ET E VAIKKVLQDKR+KNREL+ M++L H N++ LK+ F+    +DE+YL
Sbjct:   37 ISFPTTEVVGHGSFGVVFATVIQETNEKVAIKKVLQDKRFKNRELEIMKMLSHINIIDLKYFFYERDSQDEIYL 110          
The following BLAST results are available for this feature:
BLAST of CK936989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
GSK3_CAEEL3.364e-2054.95Glycogen synthase kinase-3 OS=Caenorhabditis elega... [more]
GSK3A_RAT3.364e-2052.53Glycogen synthase kinase-3 alpha OS=Rattus norvegi... [more]
GSK3A_HUMAN3.364e-2052.53Glycogen synthase kinase-3 alpha OS=Homo sapiens G... [more]
GSK3B_SPECI7.495e-2050.00Glycogen synthase kinase-3 beta OS=Spermophilus ci... [more]
SGG_DROME2.181e-1954.35Protein kinase shaggy OS=Drosophila melanogaster G... [more]
GSK3_DICDI2.181e-1942.52Glycogen synthase kinase-3 OS=Dictyostelium discoi... [more]
GSK3H_DROME1.846e-1855.43Putative glycogen synthase kinase-3 homolog OS=Dro... [more]
MRK1_YEAST7.015e-1850.57Serine/threonine-protein kinase MRK1 OS=Saccharomy... [more]
GSK3_SCHPO3.481e-1751.14Protein kinase gsk3 OS=Schizosaccharomyces pombe G... [more]
MDS1_YEAST5.938e-1755.41Serine/threonine-protein kinase MDS1/RIM11 OS=Sacc... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004515_F11 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IIF_F11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936989 ID=CK936989; Name=CK936989; organism=Citrus sinensis; type=EST; length=695bp
TTTTTTTTTTAATTTTTATTTTAAAATTCTATTCTATTTTACTTTTGTTT
TTGCAAGAGAGTTAGTTGAGCTTCTCTTTATTTCATCCCTCTGTGACAGC
GACCGCATTGAGCTTTGTTTGGATCGAAATATTTGCAAAATGCGAGATGT
TTGCAGCTTCATAGCCCTGCGGACACGGTGATTTTATCTCACTAACGAAA
TATGTACTCTACTGGTATGGCTCCTGCTTCGGCTGTTGCAAAACCTGATG
GCGATGATGTAATGATTGTTGACAAACTCCCAGCAAAACCTGATGATGAC
GATGATGCAATGCCTGTCGATAAACTCCCAGAGGAAATCAATGAAATGAA
GATTAAGGGTGAGAGAGTTGAAAAGGAAATGGAAGCGACCGTGGTTGATG
GAAATGGAACTGAGACTGGCCATATTATTGTAACAACTATTGGTGGTAGA
AATGGCCAACCCAAGCAGACCATAAGTTACATGGCAGAACGCGTAGTCGG
ACAGGGCTCATTTGGAATCGTATTTCAGGCTAAGTGTTTAGAAACTGGGG
AAACTGTTGCAATCAAGAAGGTTTTGCAGGATAAGAGATATAAGAACCGT
GAGCTACAAACAATGCGACTTCTCGATCATCCTAATGTGGTATCACTCAA
ACATTGTTTCTTTTCAACTACCGACAAGGATGAGCTCTATCTCAA
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