CN187029
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187029 vs. ExPASy Swiss-Prot
Match: PDX1_SCHPO (Probable pyridoxine biosynthesis PDX1-like protein OS=Schizosaccharomyces pombe GN=snz1 PE=1 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.030e-42 Identity = 90/162 (55.56%), Postives = 116/162 (71.60%), Query Frame = 3 Query: 9 DLGEALRRIREGVAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSD-HKVERFASR 491 +LGEALRRI EG AMIRTKGEAGTG+++EAVRH R + G++R +++M DE++T+AK+IAAP DLV + QLGRLPVV+F +MMQLGCD DP KRA+AIVRAVTHY+DP++LAEVS LG AMVG ++S + E+ A+R Sbjct: 133 NLGEALRRISEGAAMIRTKGEAGTGDVVEAVRHTRQMQGELRRVKSMSPDELYTYAKEIAAPIDLVKECAQLGRLPVVNFAAGGVATPADAALMMQLGCDGVFVGSGIFLSGDPAKRARAIVRAVTHYNDPKILAEVSENLGAAMVGRSVSSLEEKEKLATR 294
BLAST of CN187029 vs. ExPASy Swiss-Prot
Match: PDXS_CHLAD (Pyridoxal biosynthesis lyase pdxS OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=pdxS PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.758e-42 Identity = 86/161 (53.42%), Postives = 114/161 (70.81%), Query Frame = 3 Query: 9 DLGEALRRIREGVAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKVERFASR 491 +LGEALRRI EG AM+RTKGEAGTGN++EAVRH R+V +IR L++M++DE+FT+AK+I APY+LV Q G+LPVV+F ++MQLG D +P+KRA+AIV A THY+DPE++AEVS GLGEAMVG+N+ E+ +R Sbjct: 130 NLGEALRRIAEGAAMLRTKGEAGTGNVVEAVRHARAVYSEIRRLQSMNEDELFTYAKQIQAPYELVKQVATEGKLPVVNFAAGGIATPADAALLMQLGVDGIFVGSGIFKSGNPIKRARAIVEATTHYNDPEIIAEVSKGLGEAMVGINIDQIPAEQLMAR 290
BLAST of CN187029 vs. ExPASy Swiss-Prot
Match: PDXS_ROSS1 (Pyridoxal biosynthesis lyase pdxS OS=Roseiflexus sp. (strain RS-1) GN=pdxS PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 5.114e-42 Identity = 84/151 (55.63%), Postives = 109/151 (72.19%), Query Frame = 3 Query: 9 DLGEALRRIREGVAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLS 461 +LGEALRR+ EG AM+RTKGEAGTGN++EAVRH R+V +IR L++MD+DE+FT+AK I APY+LV Q + GRLPVV+F ++MQLG D DP +RA+AIV A THY++PE++AEVS GLGEAMVG+ +S Sbjct: 130 NLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHARAVYSEIRRLQSMDEDELFTYAKNIQAPYELVRQVAETGRLPVVNFAAGGIATPADAALLMQLGVDGVFVGSGIFKSGDPARRARAIVAATTHYNEPEIIAEVSRGLGEAMVGIEIS 280
BLAST of CN187029 vs. ExPASy Swiss-Prot
Match: PDXS_ROSCS (Pyridoxal biosynthesis lyase pdxS OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=pdxS PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 7.384e-41 Identity = 82/150 (54.67%), Postives = 106/150 (70.67%), Query Frame = 3 Query: 9 DLGEALRRIREGVAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNL 458 +LGE LRR+ EG AM+RTKGEAGTGN++EAVRH R+V +IR L+ MD+DE+FT+AK I APY+LV Q + GRLPVV+F ++MQLG D DP +RA+AIV A THY++PE++AEVS GLGEAMVG+ + Sbjct: 130 NLGEGLRRVAEGAAMLRTKGEAGTGNVVEAVRHARAVYSEIRRLQTMDEDELFTYAKNIQAPYELVRQVAESGRLPVVNFAAGGIATPADAALLMQLGVDGVFVGSGIFKSGDPARRARAIVAATTHYNEPEIIAEVSRGLGEAMVGIEI 279
BLAST of CN187029 vs. ExPASy Swiss-Prot
Match: PDXS_NATTJ (Pyridoxal biosynthesis lyase pdxS OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=pdxS PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.786e-40 Identity = 86/162 (53.09%), Postives = 112/162 (69.14%), Query Frame = 3 Query: 9 DLGEALRRIREGVAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSD-HKVERFASR 491 +LGEALRR+ EG +M+RTKGEAGTGN++EAVRH+R+VM IR ++N+ DDE+ T AK I APYDL+ Q K+ GRLPVV+F +MMQLG D DP KRA++IV A +Y + +VLA+VS GLGEAMVG+N+SD + ER +R Sbjct: 132 NLGEALRRVGEGASMMRTKGEAGTGNVVEAVRHIRTVMDGIRKVQNLPDDELMTEAKNIGAPYDLIKQVKEEGRLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSGDPEKRAKSIVEATLNYDNYDVLADVSSGLGEAMVGINVSDLEEQERMQNR 293
BLAST of CN187029 vs. ExPASy Swiss-Prot
Match: PDX1_DICDI (Probable pyridoxine biosynthesis protein pdx1 OS=Dictyostelium discoideum GN=pdx1 PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.066e-39 Identity = 83/154 (53.90%), Postives = 111/154 (72.08%), Query Frame = 3 Query: 9 DLGEALRRIREGVAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHK 470 +LGEALRRI EG AMIRTKGEAGTG+++EAVRH R+V +I+ ++NMD E++T+AK+I AP +LV + K+LGRLPVV+F MMMQLG D DP KRA+AIV+AVTH+++P+++A+VS LGEAMVG+N+ K Sbjct: 140 NLGEALRRISEGAAMIRTKGEAGTGDVVEAVRHARAVNKEIKKIQNMDPHELYTYAKEIQAPLELVKEVKRLGRLPVVNFAAGGVATPADAAMMMQLGMDGVFVGSGIFKSGDPAKRAKAIVQAVTHFNNPQIVAKVSENLGEAMVGINVDTLK 293
BLAST of CN187029 vs. ExPASy Swiss-Prot
Match: PDXS_DEHE1 (Pyridoxal biosynthesis lyase pdxS OS=Dehalococcoides ethenogenes (strain 195) GN=pdxS PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.292e-39 Identity = 83/161 (51.55%), Postives = 110/161 (68.32%), Query Frame = 3 Query: 9 DLGEALRRIREGVAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKVERFASR 491 DLGEALRRI EG AMIRTKGEAGTGNI+EAVRH+RSVMG +R +++M DE+ +AK+I AP +LV++ + G+LPVV+F +MMQLG D DP A+A+V+AVTHY D +VLAE+S GLG+AM GL++ + ++ SR Sbjct: 130 DLGEALRRIGEGAAMIRTKGEAGTGNIVEAVRHMRSVMGSVRRVQSMSADELSAYAKEINAPLELVLELHKTGKLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSSDPAAMAKAVVKAVTHYKDAKVLAEISKGLGDAMPGLDIKQIEPDKLISR 290
BLAST of CN187029 vs. ExPASy Swiss-Prot
Match: PDXS_THET8 (Pyridoxal biosynthesis lyase pdxS OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=pdxS PE=1 SV=2) HSP 1 Score: 159.844 bits (403), Expect = 1.540e-38 Identity = 87/162 (53.70%), Postives = 108/162 (66.67%), Query Frame = 3 Query: 9 DLGEALRRIREGVAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHK-VERFASR 491 +LGEALRRI EG AMIRTKGEAGTGN++EAVRH R++ +IR ++++ +DE+ +AK+I AP++LV GRLPVV+F +MM LG D DP KRA+AIVRAV HY+DPEVLAEVS LGE MVG+NL K ER A R Sbjct: 130 NLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDHGRLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGIFKSGDPRKRARAIVRAVAHYNDPEVLAEVSEDLGEPMVGINLDQLKEEERLAKR 291
BLAST of CN187029 vs. ExPASy Swiss-Prot
Match: PDXS_THET2 (Pyridoxal biosynthesis lyase pdxS OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=pdxS PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.540e-38 Identity = 87/162 (53.70%), Postives = 108/162 (66.67%), Query Frame = 3 Query: 9 DLGEALRRIREGVAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHK-VERFASR 491 +LGEALRRI EG AMIRTKGEAGTGN++EAVRH R++ +IR ++++ +DE+ +AK+I AP++LV GRLPVV+F +MM LG D DP KRA+AIVRAV HY+DPEVLAEVS LGE MVG+NL K ER A R Sbjct: 130 NLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDHGRLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGIFKSGDPRKRARAIVRAVAHYNDPEVLAEVSEDLGEPMVGINLDQLKEEERLAKR 291
BLAST of CN187029 vs. ExPASy Swiss-Prot
Match: PDXS_HERA2 (Pyridoxal biosynthesis lyase pdxS OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=pdxS PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 2.011e-38 Identity = 81/150 (54.00%), Postives = 103/150 (68.67%), Query Frame = 3 Query: 9 DLGEALRRIREGVAMIRTKGEAGTGNIIEAVRHVRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNL 458 +LGEALRRI EG AMIRTKGEAGTGN++EAVRH R++ +IR L+ +D DE+F AK + APY+LV Q +LGRLPVV+F +MMQLG D +P KRA+AIV A TH+ D ++LAE+S LGEAMVG+N+ Sbjct: 130 NLGEALRRITEGAAMIRTKGEAGTGNVVEAVRHARTMFAEIRRLQTLDPDELFVAAKNLQAPYELVKQIAELGRLPVVNFAAGGIATPADAALMMQLGVDGVFVGSGIFKSGNPAKRAKAIVEATTHFRDAKLLAEISRNLGEAMVGINI 279 The following BLAST results are available for this feature:
BLAST of CN187029 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 207
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187029 ID=CN187029; Name=CN187029; organism=Citrus sinensis; type=EST; length=794bpback to top |