CN187023
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187023 vs. ExPASy Swiss-Prot
Match: RSSA_SALSA (40S ribosomal protein SA OS=Salmo salar GN=rpsa PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.125e-29 Identity = 57/85 (67.06%), Postives = 70/85 (82.35%), Query Frame = -1 Query: 572 LLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 826 LLI+TDPR DHQP+ EA+ NIPTIA C+TDSP+RYVDI IP NNKG HS+G ++W+L+R VL+MRGTI H W+VM DL+FYR Sbjct: 121 LLIVTDPRADHQPLTEASYVNIPTIAMCNTDSPLRYVDIAIPCNNKGHHSVGLMWWMLSREVLRMRGTISREHPWEVMPDLYFYR 205
BLAST of CN187023 vs. ExPASy Swiss-Prot
Match: RSSA_RAT (40S ribosomal protein SA OS=Rattus norvegicus GN=Rpsa PE=1 SV=3) HSP 1 Score: 129.028 bits (323), Expect = 3.125e-29 Identity = 56/85 (65.88%), Postives = 70/85 (82.35%), Query Frame = -1 Query: 572 LLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 826 LL++TDPR DHQP+ EA+ N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI H W+VM DL+FYR Sbjct: 121 LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYR 205
BLAST of CN187023 vs. ExPASy Swiss-Prot
Match: RSSA_PIG (40S ribosomal protein SA OS=Sus scrofa GN=RPSA PE=1 SV=3) HSP 1 Score: 129.028 bits (323), Expect = 3.125e-29 Identity = 56/85 (65.88%), Postives = 70/85 (82.35%), Query Frame = -1 Query: 572 LLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 826 LL++TDPR DHQP+ EA+ N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI H W+VM DL+FYR Sbjct: 121 LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYR 205
BLAST of CN187023 vs. ExPASy Swiss-Prot
Match: RSSA_MOUSE (40S ribosomal protein SA OS=Mus musculus GN=Rpsa PE=1 SV=4) HSP 1 Score: 129.028 bits (323), Expect = 3.125e-29 Identity = 56/85 (65.88%), Postives = 70/85 (82.35%), Query Frame = -1 Query: 572 LLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 826 LL++TDPR DHQP+ EA+ N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI H W+VM DL+FYR Sbjct: 121 LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYR 205
BLAST of CN187023 vs. ExPASy Swiss-Prot
Match: RSSA_HUMAN (40S ribosomal protein SA OS=Homo sapiens GN=RPSA PE=1 SV=4) HSP 1 Score: 129.028 bits (323), Expect = 3.125e-29 Identity = 56/85 (65.88%), Postives = 70/85 (82.35%), Query Frame = -1 Query: 572 LLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 826 LL++TDPR DHQP+ EA+ N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI H W+VM DL+FYR Sbjct: 121 LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYR 205
BLAST of CN187023 vs. ExPASy Swiss-Prot
Match: RSSA_CERAE (40S ribosomal protein SA OS=Cercopithecus aethiops GN=RPSA PE=2 SV=3) HSP 1 Score: 129.028 bits (323), Expect = 3.125e-29 Identity = 56/85 (65.88%), Postives = 70/85 (82.35%), Query Frame = -1 Query: 572 LLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 826 LL++TDPR DHQP+ EA+ N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI H W+VM DL+FYR Sbjct: 121 LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYR 205
BLAST of CN187023 vs. ExPASy Swiss-Prot
Match: RSSA_BOVIN (40S ribosomal protein SA OS=Bos taurus GN=RPSA PE=2 SV=4) HSP 1 Score: 129.028 bits (323), Expect = 3.125e-29 Identity = 56/85 (65.88%), Postives = 70/85 (82.35%), Query Frame = -1 Query: 572 LLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 826 LL++TDPR DHQP+ EA+ N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR VL+MRGTI H W+VM DL+FYR Sbjct: 121 LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYR 205
BLAST of CN187023 vs. ExPASy Swiss-Prot
Match: RSSA_PINFU (40S ribosomal protein SA OS=Pinctada fucata PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.188e-28 Identity = 55/85 (64.71%), Postives = 69/85 (81.18%), Query Frame = -1 Query: 572 LLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 826 LL++TDPR DHQP+ EA+ NIP IA C+TDSP+RYVD+ IP NNK HS+G ++WLLAR VL++RGTI H W+VMVDL+FYR Sbjct: 121 LLVVTDPRIDHQPVTEASYVNIPVIALCNTDSPLRYVDVAIPCNNKSVHSVGLMWWLLAREVLRLRGTISRDHPWEVMVDLYFYR 205
BLAST of CN187023 vs. ExPASy Swiss-Prot
Match: RSSA_CRIGR (40S ribosomal protein SA OS=Cricetulus griseus GN=Rpsa PE=1 SV=3) HSP 1 Score: 126.716 bits (317), Expect = 1.551e-28 Identity = 55/85 (64.71%), Postives = 69/85 (81.18%), Query Frame = -1 Query: 572 LLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 826 LL++TDPR DHQP+ EA+ N+PTIA C+TDSP+RYVDI IP NNKG HS+G ++W+LAR V +MRGTI H W+VM DL+FYR Sbjct: 121 LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVRRMRGTISREHPWEVMPDLYFYR 205
BLAST of CN187023 vs. ExPASy Swiss-Prot
Match: RSSA_NEMVE (40S ribosomal protein SA OS=Nematostella vectensis GN=v1g198553 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.455e-28 Identity = 72/161 (44.72%), Postives = 91/161 (56.52%), Query Frame = -1 Query: 353 LLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYRXXXXXXXXXXXXXXAIDYATAEYSMNLTSG-EQWPSQIADGGWA--GGEVQKPIPVVPYFPEAPAATVPLGGDGWD 826 LLI+ DPR DHQP+ EA+ NIP IAFC+TDSP+R+VD+ IP NNKG HSIG +FWLLAR VL+MRG+I W++M DL+FYR A+ E + T+G +W GG A G + + P P AAT P WD Sbjct: 121 LLIVCDPRIDHQPVTEASYVNIPVIAFCNTDSPLRHVDVAIPCNNKGIHSIGLMFWLLAREVLRMRGSISRALPWEIMPDLYFYR---DPEEAEKEEQAALARQQEEANAGTTAGFSEW------GGAAPWGADPMATAGIAPTIPAPFAATTPAVSADWD 272 The following BLAST results are available for this feature:
BLAST of CN187023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 171
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187023 ID=CN187023; Name=CN187023; organism=Citrus sinensis; type=EST; length=826bpback to top |