CN187021

Overview
NameCN187021
Unique NameCN187021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length764
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187021 vs. ExPASy Swiss-Prot
Match: HSP71_CANAL (Heat shock protein SSA1 OS=Candida albicans GN=SSA1 PE=1 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 2.325e-28
Identity = 64/146 (43.84%), Postives = 92/146 (63.01%), Query Frame = -2
Query:  299 PKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 736
            PK++ LV       EL + INP EA   GAA++ A+ +G +      D+L + V PL +GI   G     +IPRN+T+P +K   F+T  DNQ   LI V+EGE  K ++N+LLG F+++GIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  343 PKIQKLVSDFFNGKELNKSINPDEAVAYGAAVQAAILTG-DTSSKTQDILLLDVAPLSLGIETAGGIMTKLIPRNSTIPTKKSETFSTYADNQPGVLIQVFEGERAKTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNV 487          
BLAST of CN187021 vs. ExPASy Swiss-Prot
Match: HS7C3_DICDI (Heat shock cognate 70 kDa protein 3 OS=Dictyostelium discoideum GN=DDB_G0293674 PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.325e-28
Identity = 66/147 (44.90%), Postives = 93/147 (63.27%), Query Frame = -2
Query:  299 PKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNL-DLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 736
            PKV+ L+Q+     EL + INP EA   GAA++ A+ SG  D    + +L+ I V PL +GI   G     I+PRNT +P +K   F+T  DNQS  LI VYEGE    ++N+LLG F++TGIPP+P+G P+I V  D+D++ +L V
Sbjct:  345 PKVQQLIQNLFNGKELNKSINPDEAVAYGAAVQAAILSG--DKSSRISELIFIDVAPLSLGIETVGGVMTNIVPRNTIIPCKKTQTFSTHTDNQSGVLIQVYEGERTMTKDNNLLGKFELTGIPPAPRGTPQIEVSFDVDSNGILNV 489          
BLAST of CN187021 vs. ExPASy Swiss-Prot
Match: GRP78_PONAB (78 kDa glucose-regulated protein OS=Pongo abelii GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.325e-28
Identity = 68/159 (42.77%), Postives = 91/159 (57.23%), Query Frame = -2
Query:  260 PKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRVLVGVIMPGNPHPV 736
            PK++ LV+      E   GINP EA   GAA++  V SG  D     DL  + V PL +GI   G     +IPRNT +P +K  +F+T  DNQ    I VYEGE    ++NHLLG F +TGIPP+P+GVP+I V  +ID + +LRV       GN + +
Sbjct:  369 PKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGDQDTG---DLALLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKGTGNKNKI 524          
BLAST of CN187021 vs. ExPASy Swiss-Prot
Match: HSP7D_MANSE (Heat shock 70 kDa protein cognate 4 OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.036e-28
Identity = 67/146 (45.89%), Postives = 90/146 (61.64%), Query Frame = -2
Query:  299 PKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 736
            PKV+ L+Q      EL + INP EA   GAA++ A+  G        DLL + VTPL +GI   G     +I RNTT+P ++   FTT  DNQ   LI V+EGE    ++N+LLG F++TGIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  344 PKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQ-DLLLLDVTPLSLGIETAGGVMTTLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNV 488          
BLAST of CN187021 vs. ExPASy Swiss-Prot
Match: HSP70_PENCI (Heat shock 70 kDa protein (Fragment) OS=Penicillium citrinum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.966e-28
Identity = 62/146 (42.47%), Postives = 91/146 (62.33%), Query Frame = -2
Query:  299 PKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 736
            PK++ LV     K +  + INP EA   GAA++ A+ SG        ++L + V PL +GI   G    P+I RNTT+P +K   F+T  DNQ   LI V+EGE  + ++N+LLG F++TGIPP+P+GVP+I V  D+DA+ ++ V
Sbjct:  212 PKIQKLVSDFFNK-DANKSINPDEAVAYGAAVQAAILSGDTSSKSTNEILLLDVAPLSLGIETAGGVMTPLIKRNTTIPTKKSETFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELTGIPPAPRGVPQIEVTFDLDANGIMNV 356          
BLAST of CN187021 vs. ExPASy Swiss-Prot
Match: HS7C1_DICDI (Heat shock cognate 70 kDa protein 1 OS=Dictyostelium discoideum GN=hspB PE=1 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 3.966e-28
Identity = 67/160 (41.88%), Postives = 96/160 (60.00%), Query Frame = -2
Query:  260 PKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNL-DLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRVLVGVIMPGNPHPV 736
            PKV+ L+Q      EL + INP EA   GAA++ A+ S  N+    + DLL + V PL +G+   G     +IPRNTT+P +K   F+T  DNQ   LI VYEGE    ++N+LLG F+++GIPP+P+GVP++ V  D+DA+ +L V       GN   +
Sbjct:  342 PKVQQLLQEFFNGKELNKSINPDEAVAYGAAVQAAILS--NEGGAKVADLLLLDVAPLSMGLETAGGVMTTLIPRNTTIPCKKTQTFSTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQVEVTFDVDANGILNVSAEDKSTGNKQKI 499          
BLAST of CN187021 vs. ExPASy Swiss-Prot
Match: DNAK_THEYD (Chaperone protein dnaK OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=dnaK PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.966e-28
Identity = 65/146 (44.52%), Postives = 91/146 (62.33%), Query Frame = -2
Query:  299 PKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 736
            PKV+ +VQ    K E ++G+NP E    GAA++ A+  G        ++L + VTPL +GI   G  F  II RNTT+P +K  +FTT  DNQ+   I VY+GE E   +N LLG F++ GIPP+P+G+P+I V  DIDA+ +L V
Sbjct:  342 PKVQKVVQDFFGK-EPHKGVNPDEVVAVGAAIQAAILKGEVK-----EVLLLDVTPLSLGIETLGGVFTKIIERNTTIPTKKSQIFTTAADNQTAVTIKVYQGEREMAADNKLLGVFELVGIPPAPRGIPQIEVTFDIDANGILHV 481          
BLAST of CN187021 vs. ExPASy Swiss-Prot
Match: HSP7D_DROME (Heat shock 70 kDa protein cognate 4 OS=Drosophila melanogaster GN=Hsc70-4 PE=1 SV=3)

HSP 1 Score: 124.79 bits (312), Expect = 5.179e-28
Identity = 67/146 (45.89%), Postives = 90/146 (61.64%), Query Frame = -2
Query:  299 PKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 736
            PKV+ L+Q      EL + INP EA   GAA++ A+  G        DLL + VTPL +GI   G     +I RNTT+P ++   FTT  DNQ   LI VYEGE    ++N+LLG F+++GIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  344 PKVQRLLQDLFNGKELNKSINPDEAVAYGAAVQAAILHGDKSQEVQ-DLLLLDVTPLSLGIETAGGVMSVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNV 488          
BLAST of CN187021 vs. ExPASy Swiss-Prot
Match: HSP74_YEAST (Heat shock protein SSA4 OS=Saccharomyces cerevisiae GN=SSA4 PE=1 SV=3)

HSP 1 Score: 124.79 bits (312), Expect = 5.179e-28
Identity = 65/146 (44.52%), Postives = 91/146 (62.33%), Query Frame = -2
Query:  299 PKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 736
            PKV+ LV       E    INP EA   GAA++ A+ +G +      DLL + V PL +GI   G     +IPRN+T+P +K  VF+T  DNQ   LI V+EGE  + ++N+LLG F+++GIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  342 PKVQKLVSDFFNGKEPNRSINPDEAVAYGAAVQAAILTG-DQSSTTQDLLLLDVAPLSLGIETAGGIMTKLIPRNSTIPTKKSEVFSTYADNQPGVLIQVFEGERTRTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNV 486          
BLAST of CN187021 vs. ExPASy Swiss-Prot
Match: HSP72_YEAST (Heat shock protein SSA2 OS=Saccharomyces cerevisiae GN=SSA2 PE=1 SV=3)

HSP 1 Score: 124.79 bits (312), Expect = 5.179e-28
Identity = 64/146 (43.84%), Postives = 92/146 (63.01%), Query Frame = -2
Query:  299 PKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 736
            PKV+ LV       E    INP EA   GAA++ A+ +G ++     DLL + V PL +GI   G     +IPRN+T+P +K  VF+T  DNQ   LI V+EGE  K ++N+LLG F+++GIPP+P+GVP+I V  D+D++ +L V
Sbjct:  341 PKVQKLVTDYFNGKEPNRSINPDEAVAYGAAVQAAILTG-DESSKTQDLLLLDVAPLSLGIETAGGVMTKLIPRNSTIPTKKSEVFSTYADNQPGVLIQVFEGERAKTKDNNLLGKFELSGIPPAPRGVPQIEVTFDVDSNGILNV 485          
The following BLAST results are available for this feature:
BLAST of CN187021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP71_CANAL2.325e-2843.84Heat shock protein SSA1 OS=Candida albicans GN=SSA... [more]
HS7C3_DICDI2.325e-2844.90Heat shock cognate 70 kDa protein 3 OS=Dictyosteli... [more]
GRP78_PONAB2.325e-2842.7778 kDa glucose-regulated protein OS=Pongo abelii G... [more]
HSP7D_MANSE3.036e-2845.89Heat shock 70 kDa protein cognate 4 OS=Manduca sex... [more]
HSP70_PENCI3.966e-2842.47Heat shock 70 kDa protein (Fragment) OS=Penicilliu... [more]
HS7C1_DICDI3.966e-2841.88Heat shock cognate 70 kDa protein 1 OS=Dictyosteli... [more]
DNAK_THEYD3.966e-2844.52Chaperone protein dnaK OS=Thermodesulfovibrio yell... [more]
HSP7D_DROME5.179e-2845.89Heat shock 70 kDa protein cognate 4 OS=Drosophila ... [more]
HSP74_YEAST5.179e-2844.52Heat shock protein SSA4 OS=Saccharomyces cerevisia... [more]
HSP72_YEAST5.179e-2843.84Heat shock protein SSA2 OS=Saccharomyces cerevisia... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003M21_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003M21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187021 ID=CN187021; Name=CN187021; organism=Citrus sinensis; type=EST; length=764bp
TTTTCAAGACGCATCAAACAGCCTCTATTATTTCTTTATGATGCAAACCC
ATAAAGTAAATTTTTCTGAAGGATACAGACTCATATGCATACAACGCTTT
GAAAATATTAAAAAGCAATCAAATTTCAAGACACCATTACATTTTCTTCG
GCTGCACTGTCTCAAGGTCTAGAGTGGATCCATAAGCCCTGTTTAGAGCT
TCAGCACACCAGCCATGTCCATCATCAACCGTTGGCAGTCTCACTTCCAT
TACAGGAATCACTGGATGTGGGTTGCCAGGCATAATGACCCCAACCAAAA
CTCTCAGCACACTCGAGGCATCAATGTCCATGCACACATTTATTTCTGGT
ACTCCTTTGGGAGAGGGAGGAATTCCTGTTATCTTGAAATAGCCTAGAAG
ATGATTCTCTTCTACCTTCTCCCCTTCACCTTCATAAACAATAATCAGCG
CCTCAGACTGGTTGTCGCGAACTGTTGTGAAGACCAGATCTTTCCGTGCT
GGCATCGTGGTGTTTCTAGGAATGATGGGTACAAAGTTGTTGCCATTAGC
TCGTATACCAATGCCAAGTGGTGTGACTTGGATGGTTAACAGGTCCAGGT
TCCCAAATGGATCGTTAATGCCTGAAGTCACTGCTCCTTCCAGAGCTGCC
CCACTAACTGCTGCTTCCAATGGGTTAATACCCTCATAGAGTTCTACTTT
TTTGCATGTACTCTGGACAAGATTCCTTACTTTTGGAAAATATGAGGTTT
TTTTTTTTTTTTTT
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